MSTRG.10914.1.p1 (mRNA) -

Overview
NameMSTRG.10914.1.p1
Unique NameMSTRG.10914.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000077_pilon:1025182..1027756+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10914.1.p1 ID=MSTRG.10914.1.p1|Name=MSTRG.10914.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2575bp|location=Sequence derived from alignment at sc0000077_pilon:1025182..1027756+ (Clytia hemisphaerica_ch_hm2_pilon)
aAAATCTGGCAACTTCGGGCGCGCACACAAAGTTTTTCGTATATTCATTA
CAAGTTACTAAATTTTGTGGGGCAAAGGGTACAGAAACCCCCCAAAACCT
ACAAGTTATGATTAATAGTTGTTACCAATATGTTGGATAAATTATGTCGC
GATCCTTCTCATCTTGAAAGGCTACTAAAGATCAGATTAGCCGAAGAAAA
AGAGCTGAAGCTGCTGGATTGGCTCAAGCTTGTAAGTCCACTCTTCTTAC
CTTGCTTCATGATTAGGttcaaaaattaccaaatcTTTCTCCCATTACAT
TTTATTATCAAGATCAAACTCTCATTTTACTTTTATATTTCCCCATATTC
AGGACCATATCAAGATGTTGAAGAATGGAAGGAAATTCTGAGAAGCTTGT
TGAAGTTGAATCAAAAATGCTTGTTTCAATCAGAGACTTTTGTATTGGCA
GTGCATATCCTAGATGATTTCTTAGGATTTGTGAAGGTACACGGAAAGTA
CTTGAATTGTGCTGCTTATGCATCATACTACATTGCATGCAAGCTCTTGG
AAGAGGATGAATTTGTACCAGAACTCTCCACTTTCGTTGAATTGATCGGA
CATAAATTTACTACCAACGACATAACCCGAATGGAAAAAATCATACTGGA
AAAAACTGAATGGAATATGAATCATGTTACAATTTGCAATTTCTTAGATA
TTGTAAGTCCAcattattcttgatatgcgtaagtcatttttctagcggaa
acactctaaaaaagccgggatttgacctctctctgttactgaaaatagaa
acacagaggtcaaaaaccggcttttttgggtgcttctgttaaaaaatatg
ttaaaaaagcCCTGCGCCTGGGATGAATGACGCAGAGTGTATTTTTTCCC
TTCATTTGTTTATCCTTGTATTgagacaaaaaaatttcatctcccTTGAA
GTTTACGTCATAGAACTCATTAAAAACGTTTCTAATTTTAGTATTACAGC
TTGGTTTGTGGAAAGTACTTCAAAACACTCTTTGGTAGCGATTCTTTGGC
TTACAGTATCTATCGAAATCTTGCAGCACAAGGGGTTCAATGTATCACAT
ATGTCAGCTTGATAAACTTCaaggtaatttttgaaaattctgaattatcc
aaaaaggtttaaaaatgcACAACTTTTTGTGCCCTGTTGGTATCATACAA
CATTAAAGCTTTTTATATTGTCTTTGTCATTAGTCAACAAGCCAGAGGTA
ATATTctgtattctttttcttttttagggttCAATCAAAGCCTTGGCATT
ATTGAGCTGCACACTAGAGAAAATAACATCAAGATGGTTTAGCTATATTG
AGGAGATCTGCCAAATGGGAAAAATTCAAATCCAAGATGTTTTAGAATGT
AGAGATGTCATCAAAAACAGTTCTGTTTGGCCAACAAAAGAAGCTGAAAC
CGCCacgaaataagaaatttttaaaacgcCAATGATTTTAACACCAAGAA
GGCAACTTCTTTCACCGATAGATGAAATACCTCAACAAGAAAGTGACAAG
TTATTAAGTTCTAATGAACCATCTGACAGTGAATCTATGAAATGTCTTTT
CAATGAGGAATTGGCCTCGTTTACGTCAAATCAGTTTAGACGATATACCT
CTACCATCTCCATCCAAGCGACGGAAATTGAATAGTTGTAGTTTAGAATC
AAAACTTAGTCATGGTTTCAATGGGTTGTTGACCAGTCCTGTGAAAACTT
TATCAGTCTAGCttttaaattaacttttatttttatgttgttttaacatt
ttatcaattttgttgttcttctgttgtatttttttaacttcttgattttg
ccttttattttgCTCTGTGCTTGTAAATATTcacagacatttttttttta
aagttgaatTTAGTTTCCTATCACAATGTTAGATGATCAAGCCCTTATTG
TTAATATTTGATTCATATAGGACAATTTTTGATCCTtagttttaaattct
tttcacgattattttatttattatagtTTTAAAAGTACCATTTTAGAGTC
ACCAGCCTGGATACAATAAATGTTTTATGTTCCATAAGCTTATTTTGCAA
CCAGCAATTATCATTATTTAAgattctttttgataaaaggaGTTCTGTAA
AtgttataatttcttttgtgtGTTTTATACACAGCattcttttagtttta
atgtggatagttgaattttttgaagaaaaaaaatgtttttgttattttta
ggtTTATACTGTAAATTATTGCTATTGTTATTATATATATCACACCTAAA
AATTGGGTACTTACCCCTTTGAAAGCTTACTAAAACTATATTTTGCTTTT
GCATATTATTAATATTTCTGATGTgatatatttgaatgtattatAATATC
TATATGCCCTCAAAAGCAATTTTCTTAAAGATgtacaaaaaaaatgtaaa
aaggtataaaaacttttttaaaaaacgaaaaaatattcaaaacgcTATTA
CATAAACTTTTGAAactggtttatttattttgtttccctAATATTTGTTG
ATTCAGAACTATCAGCTGATAAAGC

Coding sequence (CDS) from alignment at sc0000077_pilon:1025182..1027756+

>MSTRG.10914.1.p1 ID=MSTRG.10914.1.p1|Name=MSTRG.10914.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2673bp|location=Sequence derived from alignment at sc0000077_pilon:1025182..1027756+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGGATAAATTATGTCGCGATCCTTCTCATCTTGAAAGGCTACTAAA
GATCAGATTAGCCGAAGAAAAAGAGCTGAAGCTGCTGGATTGGCTCAAGC
TTGTAAGTCCACTCTTCTTACCTTGCTTCATGATTAGGttcaaaaattac
caaatcTTTCTCCCATTACATTTTATTATCAAGATCAAACTCTCATTTTA
CTTTTATATTTCCCCATATTCAGGACCATATCAAGATGTTGAAGAATGGA
AGGAAATTCTGAGAAGCTTGTTGAAGTTGAATCAAAAATGCTTGTTTCAA
TCAGAGACTTTTGTATTGGCAGTGCATATCCTAGATGATTTCTTAGGATT
TGTGAAGGTACACGGAAAGTACTTGAATTGTGCTGCTTATGCATCATACT
ACATTGCATGCAAGCTCTTGGAAGAGGATGAATTTGTACCAGAACTCTCC
ACTTTCGTTGAATTGATCGGACATAAATTTACTACCAACGACATAACCCG
AATGGAAAAAATCATACTGGAAAAAACTGAATGGAATATGAATCATGTTA
CAATTTGCAATTTCTTAGATATTTATTACAGCTTGGTTTGTGGAAAGTAC
TTCAAAACACTCTTTGGTAGCGATTCTTTGGCTTACAGTATCTATCGAAA
TCTTGCAGCACAAGGGGTTCAATGTATCACATATGTCAGCTTGATAAACT
TCaagggttCAATCAAAGCCTTGGCATTATTGAGCTGCACACTAGAGAAA
ATAACATCAAGATGGTTTAGCTATATTGAGGAGATCTGCCAAATGGGAAA
AATTCAAATCCAAGATGTTTTAGAATGTAGAGATGTCATCAAAAACAGTT
CTGTTTGGCCAACAAAAGAAGCTGAAACCGCCacgaaataaATGTTGGAT
AAATTATGTCGCGATCCTTCTCATCTTGAAAGGCTACTAAAGATCAGATT
AGCCGAAGAAAAAGAGCTGAAGCTGCTGGATTGGCTCAAGCTTGTAAGTC
CACTCTTCTTACCTTGCTTCATGATTAGGttcaaaaattaccaaatcTTT
CTCCCATTACATTTTATTATCAAGATCAAACTCTCATTTTACTTTTATAT
TTCCCCATATTCAGGACCATATCAAGATGTTGAAGAATGGAAGGAAATTC
TGAGAAGCTTGTTGAAGTTGAATCAAAAATGCTTGTTTCAATCAGAGACT
TTTGTATTGGCAGTGCATATCCTAGATGATTTCTTAGGATTTGTGAAGGT
ACACGGAAAGTACTTGAATTGTGCTGCTTATGCATCATACTACATTGCAT
GCAAGCTCTTGGAAGAGGATGAATTTGTACCAGAACTCTCCACTTTCGTT
GAATTGATCGGACATAAATTTACTACCAACGACATAACCCGAATGGAAAA
AATCATACTGGAAAAAACTGAATGGAATATGAATCATGTTACAATTTGCA
ATTTCTTAGATATTTATTACAGCTTGGTTTGTGGAAAGTACTTCAAAACA
CTCTTTGGTAGCGATTCTTTGGCTTACAGTATCTATCGAAATCTTGCAGC
ACAAGGGGTTCAATGTATCACATATGTCAGCTTGATAAACTTCaagggtt
CAATCAAAGCCTTGGCATTATTGAGCTGCACACTAGAGAAAATAACATCA
AGATGGTTTAGCTATATTGAGGAGATCTGCCAAATGGGAAAAATTCAAAT
CCAAGATGTTTTAGAATGTAGAGATGTCATCAAAAACAGTTCTGTTTGGC
CAACAAAAGAAGCTGAAACCGCCacgaaataaATGTTGGATAAATTATGT
CGCGATCCTTCTCATCTTGAAAGGCTACTAAAGATCAGATTAGCCGAAGA
AAAAGAGCTGAAGCTGCTGGATTGGCTCAAGCTTGTAAGTCCACTCTTCT
TACCTTGCTTCATGATTAGGttcaaaaattaccaaatcTTTCTCCCATTA
CATTTTATTATCAAGATCAAACTCTCATTTTACTTTTATATTTCCCCATA
TTCAGGACCATATCAAGATGTTGAAGAATGGAAGGAAATTCTGAGAAGCT
TGTTGAAGTTGAATCAAAAATGCTTGTTTCAATCAGAGACTTTTGTATTG
GCAGTGCATATCCTAGATGATTTCTTAGGATTTGTGAAGGTACACGGAAA
GTACTTGAATTGTGCTGCTTATGCATCATACTACATTGCATGCAAGCTCT
TGGAAGAGGATGAATTTGTACCAGAACTCTCCACTTTCGTTGAATTGATC
GGACATAAATTTACTACCAACGACATAACCCGAATGGAAAAAATCATACT
GGAAAAAACTGAATGGAATATGAATCATGTTACAATTTGCAATTTCTTAG
ATATTTATTACAGCTTGGTTTGTGGAAAGTACTTCAAAACACTCTTTGGT
AGCGATTCTTTGGCTTACAGTATCTATCGAAATCTTGCAGCACAAGGGGT
TCAATGTATCACATATGTCAGCTTGATAAACTTCaagggttCAATCAAAG
CCTTGGCATTATTGAGCTGCACACTAGAGAAAATAACATCAAGATGGTTT
AGCTATATTGAGGAGATCTGCCAAATGGGAAAAATTCAAATCCAAGATGT
TTTAGAATGTAGAGATGTCATCAAAAACAGTTCTGTTTGGCCAACAAAAG
AAGCTGAAACCGCCacgaaataa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10914MSTRG.10914Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10914.1.p1MSTRG.10914.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10914.1.p1.exon1MSTRG.10914.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10914.1.p1.exon2MSTRG.10914.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10914.1.p1.exon3MSTRG.10914.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000077_pilongenomesc0000077_pilon:1025182..1027756 +