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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000077_pilon:707850..711615- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10887.1.p1 ID=MSTRG.10887.1.p1|Name=MSTRG.10887.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3766bp|location=Sequence derived from alignment at sc0000077_pilon:707850..711615- (Clytia hemisphaerica_ch_hm2_pilon)
ATCAGTAGATAAATTTCAAATTTTGGCTAACAAACAATCAAAAAGCGAAG
AGTCAAAGTATCAACCAAGAAGTGGGAGGCGGAGCCACAGCCACCAATGA
GATCTGGGCATTACTAATATGGATCACGGAAAGGTTGATCTTATTCTATT
AATTTATTTTTAGTTTTTGATTCTAAATTCATCAAATCAATCCAAAGAAT
CTGCAAATTTTCAAAAGTACTTTATTATGTAAAGATGAATATGCATTGAT
GACCAAATTTAAAGGCCGGTCTCCACTGTGCGCGCTTCGATCGCACTTTT
TCAAGCAGAGCTTCCATGCTATTTGGTCAAAAGAAAAATGAAGCAACCCC
ATTGGTGTGATCTGACAACGGTTAAAATAAGTTGAAATATGTTCAACTTT
TTTCGAGCGCGCGCTATATTTTCATCACGTAATCTTTTTATTTCAAGCAA
AAAAGATTGAAGCAAAAAAAGTGCGGTCGCAGCGCACGCAAGTGGAAACC
GGCCTTAAGCCTCGTAAAAGAATTCTTTTTTTCCTCTTGATTCTTCTAGA
GTGTTTTCCATCACTCGCAGAATTTGACGATTTTCATTGAACAATGGTCT
TTGAGAAGCACGAAAGGTATCAAAATTTGTTTTAATAGCTTACAAGATTG
CTTTGTTTCACTATCCCAGATTACATGACGACCTAAGTAAAAAACAACAA
GTTTTATTTTTATTTTCAGCAAAAGCTTTTCGGTAAAACCATCTTCAGCA
TCTAGCACTGAAGATGGTTTTACATGACGTCCTCATCCTATATAATTATA
TTTTATTTAGAAACCTTTTTCATCTTTGCTTTATTCTGTAGAGTTTGTTG
GAACTTGTATAGCTATTGGATGTTTGGCATTTTTCCATGAAGCGATGAAA
GTCGTCCTCCATGTTGTCACACAGAAACAAAAAGCTTGTCACAAATCGTA
AGTTTGAACATAGCCCGTATAAGAAACCCCGATCTGGAAGCCTTTTGTAT
CTTTTTATTGTTTGAAACTTAAATTTGCGTTGAAATTTTGATCATGTGAT
AAACTTTTGAACCAATTCGAAGAGGAGTATTTGGTAACGTTATTTTTATA
ATCGTTACTAACAAAAGAGAAAGTCTAACAAAAAGTTACAACAATATACC
CTGAGTATCAGAGGTTAAGTTTTCAAAGAAAATAGTAACCTCTGAAGACA
AATAATAGAAATTTTATCGCGCATGTGTCAATCTAATCACTGTAGAAAAA
ATCAAAGATGAAGAGCAAATATTACCATATTAATGTCTAGCAGACTGTAT
CAGTATGCAGTTTTCTATTTACGAATTCCCCAGAAACCTCCAAGTGTAGT
TGAAATGAGTTTATTTCGGAAGAAATCTTTTACATGATCCCCAAATGTAT
AACAGTAATTACTAAATTTTTAATTATGGAAATGTCACTTTAATTGAATC
GAAATAATAGACAGACTTTATGTTATGATTCTCTATCACTGACTCTTTTT
ACAAAGCATTGATGACTTTTTGTAAGTTGTGTTTTCAACGACGGGAATAA
AAGTATCGCCTATGACGCTCATCCAAGATCTTGGATGGTCGTCATGGTTA
CTTTTGTCTTCGCTGATTGCGCGATGAATAGAATCTCGATTCGTCGGCAC
AGCGTAAATATATGTTTTTGAGCTGTGCTTTTCACGGTAACAACAATAGG
CTTCCATTCCAGACCAGGGTTTTTTATACGGACTATGGTTTGAAAAAGAT
TCTAGAGATAAACCCCGTTTTTATATTAATGTTTCGTTTCATCTTAGGTA
GTAACTAAACAAACAGGCTCATAACAAGACTGAATTTGACATGCACAACG
AATTCGAGCGAGGGCCTAGAATAACTAATAAACCACTTCGTCGTATTTCG
CTGCGGCTTACGCTTGTAATGAGCAACCTTTATAAATAAACAATATTTTC
GTGTACTGTGTCTCGGAAAAGGCGGACGCTTGCTAGCTTAGGAATAAATT
ATGCAATGATTGGTACGGAATGTCAGTTTTGAGCCTTTCTTAGAGTTACA
ATAATGATAGTCAACGTGACACGTTTCTTCTTTATAAAAACATCCAATAT
TTTTGAAGCCTTCGGATGTTCTTAACTTGTTGAGTTTTAAGCCTGTTCTT
TTTTTCATTTTGTGAGCATTCTTGTCACTTTTCATAAGAAATCGCAAAAC
CTTGATATGTTCCTAAATTTCTATGTTCTTATATAGTTTGTTCTTATAAA
AAAAGCTTATTTTTTATGCCTCCTCCCTAAAAATTCTTGCTGGTTTGAAG
ATTAAGATTATTATCTTTCGTTTTCTTATAGATCGATCGTCATATTAACA
ATGAACCATGTCAAATACAGGAAATCTACCTTGTAAGTACTTCCTGATTA
GGACAATAGCAACTATCTTTCTTGCACTATTCGCTCTTCTTTTTGCCTGC
GATGGCTTAAAGCATGACATCTAATCCTTCGGGCTTTACAAATCTGTGGA
TCTGATTTTGACGTTTATGATGGAGAGAGTTTTTTGTAGCTATACCCCTG
TGGTGTACTAGGTTTGCGAGATGAGGGGTTAAGGAGCGATGGCCAAGTGG
TCAAAGGTGTCAGCATCTCAAACCAGGGATTCACAGTTCGAATCCCCGCT
CCTTCCAATGTTCCGTTCAGTTCATAAATAACCGAGCAGGCTTGCTGTGG
ACCCCGTAAAAACAATCAAAAGACTGTCTAAAAGTCTTAGATTACCGGGC
TATCCACGTAAAACATCGACTCTATCCATCTATCTACGGGTGTGTCCGTG
CGGGTATAAATCACAGATTTATAATAAACCTCGAAGGGTTAGATGTCGTG
CTTTAAGCAATCGCAGGCAAAAAAGTGCATAGTGCAAGAAATATAGTTGC
TATTGTTTTCAAAAATCCCTGAAGCTTCTGATTGGACAAGTGCTGAAATT
CTATTGTGATGTCACGTGACCTAAGTAACTGAGAAATTACCGAGAAACGG
CACACTTTTCAGCCAAAGCACGACATCTAGCCCTTTGGGCTTCGGGCTTT
ATAAATCTGTGGTATGAGCCAGATATTGAAAATCAACCCTTAGAGAGACT
GAATTTTGAAAATCTTGAAATTTTTTGACGTTTTTGCCGCCTTTACAGAC
ACTTTTTCCCCAAAATTTCTGCCAAAAATTTCAAATTTTAGTACAGATTT
CAAAACTTTATGACCCTTTGAGGAAATCGAGTTTCGATTTTCGTAGTTTT
GGAAACCTTACAGAGACTCAATTACTTTTTAATGATTTTTGTACCCCTTT
AAGGGACTTTCAAGGGTGTGAAAAAGGGTCCCTAATGGCTCGCATATACC
TGGCACTTATTTTGCCAAAGAATCCCCTCCCTCGGGAGATTTGCCCCTCA
GTATTTTAATTTAGATTAAATTTTGTGCACTTTTTTCCCTTTCTATGTAT
GTTTATGTTTTTATTTCAGTCGACTACGGAAGTTTTGTTGGCATTTATTA
CAAACGATGATATATACTTTACAAACAATGTCTGGTTTCTTGATAATGTT
AGCAGTTATGTCTTACAATGTTTATATCTTAATGTCAGCAATCGTTGGCT
TTGCGTTTGGTTATCTCATGTTGGGCTGGATAACTGCTCCCTTTGGTGGA
GATATTCAATTTTGAAGTGCATTACTTCTCTGGAATAACATATTAGATGA
TTAAATAGGATGGTCTGAGAATTTTAAAAACTTTTATATTCATAATGCTA
GAAACTTTTATCTGAC Coding sequence (CDS) from alignment at sc0000077_pilon:707850..711615- >MSTRG.10887.1.p1 ID=MSTRG.10887.1.p1|Name=MSTRG.10887.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2175bp|location=Sequence derived from alignment at sc0000077_pilon:707850..711615- (Clytia hemisphaerica_ch_hm2_pilon)
TCGACTACGGAAGTTTTGTTGGCATTTATTACAAACGATGATATATACTT
TACAAACAATGTCTGGTTTCTTGATAATGTTAGCAGTTATGTCTTACAAT
GTTTATATCTTAATGTCAGCAATCGTTGGCTTTGCGTTTGGTTATCTCAT
GTTGGGCTGGATAACTGCTCCCTTTGGTGGAGATATTCAATTTTGAATCG
ATCGTCATATTAACAATGAACCATGTCAAATACAGGAAATCTACCTTAGT
TTGTTGGAACTTGTATAGCTATTGGATGTTTGGCATTTTTCCATGAAGCG
ATGAAAGTCGTCCTCCATGTTGTCACACAGAAACAAAAAGCTTGTCACAA
ATCAGTGTTTTCCATCACTCGCAGAATTTGACGATTTTCATTGAACAATG
GTCTTTGAGAAGCACGAAAGATGGATCACGGAAAGTCGACTACGGAAGTT
TTGTTGGCATTTATTACAAACGATGATATATACTTTACAAACAATGTCTG
GTTTCTTGATAATGTTAGCAGTTATGTCTTACAATGTTTATATCTTAATG
TCAGCAATCGTTGGCTTTGCGTTTGGTTATCTCATGTTGGGCTGGATAAC
TGCTCCCTTTGGTGGAGATATTCAATTTTGAATCGATCGTCATATTAACA
ATGAACCATGTCAAATACAGGAAATCTACCTTAGTTTGTTGGAACTTGTA
TAGCTATTGGATGTTTGGCATTTTTCCATGAAGCGATGAAAGTCGTCCTC
CATGTTGTCACACAGAAACAAAAAGCTTGTCACAAATCAGTGTTTTCCAT
CACTCGCAGAATTTGACGATTTTCATTGAACAATGGTCTTTGAGAAGCAC
GAAAGATGGATCACGGAAAGTCGACTACGGAAGTTTTGTTGGCATTTATT
ACAAACGATGATATATACTTTACAAACAATGTCTGGTTTCTTGATAATGT
TAGCAGTTATGTCTTACAATGTTTATATCTTAATGTCAGCAATCGTTGGC
TTTGCGTTTGGTTATCTCATGTTGGGCTGGATAACTGCTCCCTTTGGTGG
AGATATTCAATTTTGAATCGATCGTCATATTAACAATGAACCATGTCAAA
TACAGGAAATCTACCTTAGTTTGTTGGAACTTGTATAGCTATTGGATGTT
TGGCATTTTTCCATGAAGCGATGAAAGTCGTCCTCCATGTTGTCACACAG
AAACAAAAAGCTTGTCACAAATCAGTGTTTTCCATCACTCGCAGAATTTG
ACGATTTTCATTGAACAATGGTCTTTGAGAAGCACGAAAGATGGATCACG
GAAAGTCGACTACGGAAGTTTTGTTGGCATTTATTACAAACGATGATATA
TACTTTACAAACAATGTCTGGTTTCTTGATAATGTTAGCAGTTATGTCTT
ACAATGTTTATATCTTAATGTCAGCAATCGTTGGCTTTGCGTTTGGTTAT
CTCATGTTGGGCTGGATAACTGCTCCCTTTGGTGGAGATATTCAATTTTG
AATCGATCGTCATATTAACAATGAACCATGTCAAATACAGGAAATCTACC
TTAGTTTGTTGGAACTTGTATAGCTATTGGATGTTTGGCATTTTTCCATG
AAGCGATGAAAGTCGTCCTCCATGTTGTCACACAGAAACAAAAAGCTTGT
CACAAATCAGTGTTTTCCATCACTCGCAGAATTTGACGATTTTCATTGAA
CAATGGTCTTTGAGAAGCACGAAAGATGGATCACGGAAAGTCGACTACGG
AAGTTTTGTTGGCATTTATTACAAACGATGATATATACTTTACAAACAAT
GTCTGGTTTCTTGATAATGTTAGCAGTTATGTCTTACAATGTTTATATCT
TAATGTCAGCAATCGTTGGCTTTGCGTTTGGTTATCTCATGTTGGGCTGG
ATAACTGCTCCCTTTGGTGGAGATATTCAATTTTGAATCGATCGTCATAT
TAACAATGAACCATGTCAAATACAGGAAATCTACCTTAGTTTGTTGGAAC
TTGTATAGCTATTGGATGTTTGGCATTTTTCCATGAAGCGATGAAAGTCG
TCCTCCATGTTGTCACACAGAAACAAAAAGCTTGTCACAAATCAGTGTTT
TCCATCACTCGCAGAATTTGACGATTTTCATTGAACAATGGTCTTTGAGA
AGCACGAAAGATGGATCACGGAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000077_pilon | genome | sc0000077_pilon:707850..711615 - |
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