|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000077_pilon:568830..579561+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10875.2.p1 ID=MSTRG.10875.2.p1|Name=MSTRG.10875.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=10732bp|location=Sequence derived from alignment at sc0000077_pilon:568830..579561+ (Clytia hemisphaerica_ch_hm2_pilon) AGAGATGATGTTGAAAAGTAGAAAAAGTCTATGGGATGAAATAcctttat
caacattttctcTGCTACTCCTGGAGGAAACCCAAGTTTATCATCTTTTG
AATGCATCAATTGGAAAAAGTCAGTACGTCGggacaagaaataaaaaata
gaatcTAAAAAAGGTTCAATCTTTCCACAATGTTGCAAAATCCCCAAGAA
AACATCATCAAATTTAACCATTTCCTCGTTTGATAAGGTCATGATTTCTC
TCTCTTCATTCAAGCTTGATCAACAGTGAAATAATGAAGAAGGTAGCGAC
AACAAAAGGAGAAAATTGAGTAGAGAAAATGACAGAACAGAATGAGATGT
ATTTCGATTTTCGATTCTCTGAAATTTTGGAATCGAAAAGTGATCAAGTT
TAGTTTACTGGGCAACtgactttcgttttctcaattTTCCCGCCAAATTA
GCCTTGCCTCCACTAGCAGTTTTACGGGCTGTTTCTCTTTTGCGTGGCAG
CTCGGTGTGATTATTCGAAGTAATCTTAAAGACATTTATTGAAACTACCT
GTCCTTTTCGCCATCTTGACAAGAAGGTTCGAGATTTTAGCTAACTGTTC
TTGTTTTGAATCTTGGAATTGCTTCGTCATCGTCAATATAGTATAAGAAT
GCTTCGagtaaaataaagtttgatCATATTTGATGCTACTTTcggtttta
tttttgaatattatACATTGACTTTCTCTTATATTTCGTCTTAGATCAAG
ATGGGTCGCCGTCCAGCTAGGTGGTAAGTGAACTACGAATTATATAAATC
GTTTACTTCGAAAAGTCTACTTGATGAGCtttataggccatttcacggtc
gaaatggatcatgggtaatcaggaattgactagacgcaaaaatcttcaat
ttttttcaaaactttggaccaatagtaagtcgtcattagcgcgcagtcgt
cctgattacccattacgctttgcgagtgtgaaatggcctatgatGGACAA
AATCCAACAGTGCCAGACAGTTTACTTCACGAAATGACAATAAGAAGAAG
CATaacccaaaaataaacatttccttgGAAGTggtccagacccgatcaat
cgaacttgtcgaaccaatcgaactaatcgaactccattgaacgattaaag
ttcgattagttcggtcagtaaaaagttcgattagttcgatgatattaaaa
tcctcatatcttccctcgcttgcaaaaactttgtcctggcacgcgattgc
caatttcgacagttcccggacttaccAGCTTGATGTTTATTGTAACCAAA
Cctattgatcgaacttaatcaaacactcacaatcttttaaaaaatcttag
agatcgaactttaatcgttcgatggagttcgattagttcgattgttcgac
aagttcgattgattgggtctggagtggttgaaaatgatgatataaagcca
ggcggtgtcaatcgaactgttctattatcgaactaatcgaaccctatcga
acgatagctgtttgattaccgaacccaatcgaacacctatggcgatggga
atttgatgttctgtttaccgtcgcgtttcaaaaaatatttgatgcggcaa
aatttcattattcattattcctacctcacgtgcgtttgcgtagggtaaag
tggcgaaatgcgaaaatcaaatttggcaaaaaaaaattgaaaaatgaccc
tacaagatttgactatatctttttattccatgaagagattactttcaaat
aaaaaatgtattaacaatgaatgggTaagctttctagaaatccaaacata
aattgtatagcttttaccaaaaaatagcactttaggatcagaaacaatca
aaaaccagtttttttccaatttcttcgagttacaggattaattctttctt
tttgaaatttcagtagGGTGGCCAttatggttcccttgctcatatcaggg
gggccgAGACGGGAAGAGATTAAAGTTCTAAGTAAAATCTGATTGTCCcc
aaaagtgcctttttttttctatcttttaaATTTGTCCAGCCTTATCCCTT
taagtaaagcttcctatacctttgtccttcagaaaaaccaaaaatattgg
ccctTAAATGCTTgcttcagttcctgtagccagtagtgtgtaATTTGACC
CCCTGTTTTCTATTTTCGCGCGGGTTTTTAATAGATAAGTCACatctcaa
atcccgcagtcttattggacctagagaaagcgaaagtgaatcgcgcgatc
tgattggatgaaaaaaagaccgcgggagcggaaacgaatggaattctcta
atTCTCTTTTAAATCAAGATGGGGCGAGAAAGCATGTCTTTGCTTGACGA
AAGGtagtaaattctggttgattgttaaggttttatcttatctaatttta
ctttaattagtgAGGCTTCTTCGAtatttggggaaggtaagtctgtaaaa
gttatttgttttttcggtggaaaaatgtttataaaaagcattttgtgctc
aaggtttattgttctcgcaaatttttgtcttcatgTAAATAGATGAACGA
GTATTTGACTGTTGCTTATGATTTTTccatagaacatagtaaaactattc
aggaacttagacctttttacagaatttcaaactgcttaaaaaaatgCCCG
CCCCATTCGCGGACGTGATCGGAACCATGTTTTTTACTCGAGGCGCACAT
TTTGTTAGcgaagatgttatttttgattcactttgagtgttttggatagc
ttggcacaggaaaagaagaaaataatgagtttttaagaaataatgaactt
ttttgagcggcgGCTCAAGAGCATGCGGGCGgtcgacggtaaacagaaca
tcaaattcccatcgcctaTCGAACCGGAAAAACTttggccaggcccaatt
gatagtttggttcgtgtcctccAACCACCGACtctaaattttttagaaaa
catgTTTCACTTTGAGTCCTCATTTTCACATGAGAACTATCTCTGCGGCT
CTTTTTTAACTGACTGCTTTGATTCTTTTATAAACAACATCCACTTCACG
CACAGAAAATGTCCCGGTGTAACCCATACTTAAAAACAAATACTAAGCAC
CTAAAAGCAGAGAGTCACAGTGGTATTCCTCTAAGCACACGCCGCGAACG
CCTTAATCTCCAACTAAAAGGTTACCTTGCGACTGCGGCACGTGTCTTTG
TGGATCCGGGATTTAGGCTATTTCTTTACATTCGTTGGATTCCAGGATTG
CGCGGTTGCTTGAGGAATTTCAAAAGTTGaggtttttggtgggaaaatga
aaaaaaggttccaattttagctaccgaccgacccatttttcaaagcttct
aggacacaaaccaaacaatcaattgggcctggcctttCGTAAAGTTTGAC
TGTTTGATTATACGATTATAGTTTGATCGCAGTTTGATGAATACGAttga
ggttcgatcagttcgagtAAGATTGCAGTTCGATTGGTTCAATTAAATTG
ATTTATATATACCTTGccgcccaattttttatttatattccgaGGGCGTA
TTGGCGGCTGCCCacgaaaaaaaaagatcttaatttttattactttcttt
aaaaaagtgttatctctattatttcaaatgagcaGTAATGCATGAGTGAA
GCATAATACggtgcctgtgttttgattaaacaacctcgtaattttctgaa
aggtaaagaaaagtagaattaATCCAACACAATCATCGTACCACATCGAA
CTTTCATCAaacttcatcgaacaaagaacaCTCATCGAAAtaaatcgaac
ttatcaagaaatttttgaaagttcgatAGCTGTTTGATCGGGCTCAGTAA
TCGAACAGCTAACGTTCGATTTTGCTGATAAagttcgataacgaaaatca
GTTCGATAGGGTTTGGTTGACACCGCCTGAATAAAGATCGTTGAAATATT
CCTACAAAATCGACTCaattttcttgttgttgtttttttttgaaaaatcc
aaggaaatgtttatttttggattatgctttttggacctacctaaggtagt
cctttaaattaacccttgtccgttcgtttGTTCGTTCGTTCGTTTGTTCG
TCCGTTCGTTCGTTCGTCTGTTGCCAGCTTTTCTCGGGATCGGCTCATTA
GTTTTTTCTAATTTTTTGCACAATGATGCAAATTGGCAATGCCCAAAATG
TGACGGAGCCCGATTTTCGAAAAAAAAATTTTTCCGGCCGAAAATGGCAG
AAATATGCCGGAAAAACTGGTTTTTCGGCATTTTCTCGAGATTTCATCAT
TAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaGCATATAT
CAATAAAATGTTCAGTTTGTGTCTTTAAACATCCCCAAATCCAGTCGCAT
AGTTGGTAGTAAATGTTGTTGGATTTATAAATATGTCGGAAAAACCATTG
GTGCTCCGTTTaaatttgctaaaataaaaTCCATTGAGATGTATTGACCT
TAAAACTGGACCCAATTTTTTACCCTCAGGGGTACCGGCTCTATCATGGC
AGTGAATTACagttcaaaaatttcaatgagggtggatggaaataaaaaaa
tggctgtaacttttgataaaatttgaatgcAGTTGCAactttgtgcttgt
tgaaaagatatttgtggtGGAATatgatcaagcaaaaaaaaatgaagaag
ataaatatcaacttcttgtagaaatgtggtataattgcTATTTGACAGGA
GTGATCCTCAAGATTTATGAATCTTTTGTTAGCCCCAGGACTTAtgaccc
tagacactttcaaaaaattgatccagtaaaaaagggttttccaatgtaaa
ttgcgttcggttttaagtttaagataaaatattttgcccactttctataa
aaatattgtggTGCAGGTGAAATgttttcagattcatgagcttctATTTG
AGTAATGGAGGCCAACTATTaggctgaattattttagcccccacgttaag
tgaagagattttagctcccccccccccaaaaaaaaaaaagtggtgtactt
ccagccccctcctattttgggaaaaatttgtTAAcccccccAGACCAGCA
GGGGGCATGCAGAAAAAATCACAACTTGATTCAAATTCCCTCAAAAGTTA
CATCCaattttgtctcagctgcaaattatttgaGACAGACCTTAGCACAG
AGGACTTCAAATTTGTCAAACCAATGCATAGCCAATTCCTTCATACTTTC
ACCCACAGTATGAAGGCCAGACACTATGCTATATTAATTATCAAAGTATC
ATTGAACTTTTTCCTCCTCGTGAAAAAGTTGCAGAGCTCTAAAGGTATTC
TTGCCTTGCACTTGAAAACAACCATATAATCGGAATGTCAATTTTACCAT
AACTAATCTTAATAGGATAgagtttatttttataagtattCAGTGATCCG
GTTGCAGGGTTTAGAGataccctggaaaacctggaagaatgtttcaaaaa
ttcagTGAAACTCTGATTTTTGGACCTGCCCCGGTGGGgaggaggtccta
taaattcgcacatcctttaattttcgcgcggcCAAGTGTGCAAAAATAGA
CTATTTCGCGCGCCTTTTATATTTGGGCACGTATTCTGTGCGAAAATTAA
GGAATTGCTATTTTGCAACATTTTCTGTTGGATGTTTTTGTTACAGCAAC
AAAGTTTTCATGTTGCAATTGAGAATTATACAAAAccagggggggtcggt
actaaaatctcagacatcatgacatttagtgacgtggtggtacgcaaaaa
agctcaaaaataattttagtaccatgtgtactaaaataccaaaaagggtg
gtcccttaaagaaatttttgaaaaatcttagtattttgttctaaaatcag
ccaaaatggagcattttttaacaattttgaaaaaaaattgattttttttt
tcaggaattctcgaaaaaatcttcagaaatctttcagaatttttccaatt
ttttaaatattttttaaaaatatttttatgtatagttcagcacagtttag
taataaaattctattattttgcagattgatgcactaaattcgactaggtt
tgtaacaatgaccccattttggtaaatttaaagctGTAAAAGGGCAAAGA
attggtatctatgttaaattgctcaaaataattttagtacatgtgtacta
aaataacattttcgaaaaataggtggggtatgtcaaaaattagcgaaaat
ccttttagtactcatgtatgtcttacattttagtactgacccccccccct
gacaaAACCCTCGTGTCCCCTCACCTCAAAgattttttgcaacatttttt
ttaacCTATCAAATTCGTTATACGAATAAACACGAATTAAAATCATCGGC
CATTTTGAATCGCTGTCACACGTGTTCTAACtttaattttataaattttg
tttcatGTGCACGGAATCAATTTTCATGCGAATGCAACAAATAATTTTCA
ATGCAATCGCACAAAAATTGTTTCTGTGTCCCCGAAGCTTTAAATCATTG
TTCTTAGCAATAAACAGGGCAACAAATTTGTCACTTTTACTTTTTCAGAC
TCGAAGATTAGGATTTTTGATTTGGGAAGAAAGAGACAACCTGTCGATGA
CTTCCCTAAATGTGTCAATCTCGTATCTGACGAATATGAGCAACTTTCAG
CAGAAGGGTTAGAGGCAGCACGTATCTGCGCCAACAAATACATGGTTAAA
ACTGCTGGAAAAGAAAGTTTCCACATGCGTATACGTGTCCATCCATTCCA
CATTGTCCGTATCAATAAAATGTTGTCGTGTGCCGGAGCTGATAGGCTTC
AAACAGGAATGAGAGGTGCTTTCGGTAAGCCACAAGGAACAGTTGCTCGC
GTTAATATTGGACAACCTTTAATCTCCATTCGATGCAAAGATCAACATGA
ACACGTTGCTATTGAAGCTTTGAGAAGAGCTAAATTCAAGTTCCCTGGAC
GTCAAAAGGTATTTGAGTACTAAATttggttctcaacttcagttgagcta
taatctgagaatgtctgtatgtccgtccgaaaactttagggcaggctgga
cacttcaaaaaggtcggattggctgaaatttggcacacttgttccttgtg
tgaatatctgggggtgtttttttcattttttgaaaattttgatttttggg
gcctggggacgagtttttcgccaaaacgaggctaagactttggggcagcc
tggagactgcaaaaatggtcaaatttggctgaaatttggcagtAAACAGT
AAGTTTATATTGTTGTATGCTTTTTCCTGCATTGCCCATAAGAGTCAAGG
ACAAAcattaaacaaaataataattgatttaaTCCCTCCAAAAGGAATGA
AAAGAATCcatttgagttttgtttatgtgCTATTGAGCAGAGTTCGGAGA
TTGGCTGATCTCACAATTGTCAGACCCTTTGATCGGGATATTTTAAACTT
GTCTGTGGATAGTGACTGTAAAGCTATGATGGTAGACTTTAAGAATAGGG
ATATATGTAAACATTTGTGAACCCAAGAAAACTTTAATatcttgataaat
tttaaaatcaattttcgtatatGATAAATTGtgggaaattaatttttcag
agcAACGTGTGAACAAAAGCCACAAAAGGTTTGAGGAACTTTCTCctaag
ttatttattttgaaaggctcttaggacgaggacactaccttattggaact
aattttcgcgggaactaattttcgcggtcgaaaaaaaatatccggaaaat
tgcatttcgcgggttttaattttcgcggttttttccattttggaattttc
gcgggttttaattttcgcggttttgcccttttttggacaaatttctttca
ttttcctagggatttttcaaatttttcgataaaattggaaaaaattgtat
ttcacgggaattaattttcgcggttttcagctctcaaaatttttcgcggg
atcaaattttcgcgattttgacgaaaaaccgcgaaaaacgctaaaattaa
aacccgtgaaaattagttccaataaggtattctaacgcacataaaaaaat
gaaaaaattaagataaaaacacccccaggtattcacccaaggaacaagtg
taccaaatttcagccaaaacggacaaagtatatttgctacctaatactaa
atatttgaaatgttacaattgggccttctaataacgggaaaatctgaagt
tgagcccagtgcggtgcggtTCGACTATTTTGTCATAGTTTATGAAATCG
ACCACTATAGAGTGAATACTTTAAtcggactaaatttcgcgaaaagaATC
TAAATTTTCTGGAATGATTGATTCTGCGAATCaagagttttaaaaaattt
cgcgtggatttaatttcatgtttttgatcCCCTTGTCCTAAttttgctgt
attagcctccttgctttcaaaaattttcctcccagaacatttttattcag
aCCCCACCGCTAactaagttttgagattttgtcCAATCCCCTCGCTTATT
CCATTTTCAAGTTATTTTGTTGAGCTAtgaaaaacaagttaaaaattcGA
GTTATCTCTATTTTATAACTCGGTTCCTATATTTTAATCAAAACCTAAGA
CttgaattataaaaagaaatattcacaaaaataaaggAACCGAGTACCGA
ATTGTTGATGAGCTTATAATCAAGCCAAAAGTTACGAAAAAGGATAATAC
GCTGCAATTCggttttttaactcaaaaaaaaactgtgacgaacgtacttt
tttgGATGCCCAGGCTTAGACATCTCAGAATTTTAGCCTTTCCTCAAAGC
AAGAGATTCCAACCTGTTATtttcttcaattcttagatCTTTGTTTCCAA
GAAATGGGGATTTACCCGCTGGAACAGAGAAGAATATGTTGCACGCCGTA
AGGATGGCTCCATCAAACCAGACGGTACCAATGTTCAATATTATCCAAAC
AAGGGACCCTTGAAACAATGGAAATGGAGAGAAAGtagatgttaattttt
gtttatttgtttgtaaACAGAAATTTTGATGTCATGGAATTACAAGATAA
CAACCACCTGGACATTACAATgtttctcattttgaaaatactcttaggtg
ccaaataaacgcccccctcccaatttttttaatgcattatttcaaaatca
acaatcaacgtctccagtacattcttattccaactcccccccccccgcgc
ttattaattttagatttaacttgtttttgaaaggtaaaaacagtacgaag
catgtttttatttgagaataagggattgcaaatctgttattgatgtttgt
ttctcattttttattacatCATCAACTCAAAGTTGCCTATATTTacctag
acaggagacccgtccttgtttttggaaggtaaaaatagtatgaagcaata
tttttatttgagaataagggattgcaaatctg Coding sequence (CDS) from alignment at sc0000077_pilon:568830..579561+ >MSTRG.10875.2.p1 ID=MSTRG.10875.2.p1|Name=MSTRG.10875.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=852bp|location=Sequence derived from alignment at sc0000077_pilon:568830..579561+ (Clytia hemisphaerica_ch_hm2_pilon) ATGGTTAAAACTGCTGGAAAAGAAAGTTTCCACATGCGTATACGTGTCCA TCCATTCCACATTGTCCGTATCAATAAAATGTTGTCGTGTGCCGGAGCTG ATAGGCTTCAAACAGGAATGAGAGGTGCTTTCGGTAAGCCACAAGGAACA GTTGCTCGCGTTAATATTGGACAACCTTTAATCTCCATTCGATGCAAAGA TCAACATGAACACGTTGCTATTGAAGCTTTGAGAAGAGCTAAATTCAAGT TCCCTGGACGTCAAAAGatCTTTGTTTCCAAGAAATGGGGATTTACCCGC TGGAACAGAGAAGAATATGTTGCACGCCGTAAGGATGGCTCCATCAAACC AGACGGTACCAATGTTCAATATTATCCAAACAAGGGACCCTTGAAACAAT GGAAATGGAGAGAAAGtagatgttaaATGGTTAAAACTGCTGGAAAAGAA AGTTTCCACATGCGTATACGTGTCCATCCATTCCACATTGTCCGTATCAA TAAAATGTTGTCGTGTGCCGGAGCTGATAGGCTTCAAACAGGAATGAGAG GTGCTTTCGGTAAGCCACAAGGAACAGTTGCTCGCGTTAATATTGGACAA CCTTTAATCTCCATTCGATGCAAAGATCAACATGAACACGTTGCTATTGA AGCTTTGAGAAGAGCTAAATTCAAGTTCCCTGGACGTCAAAAGatCTTTG TTTCCAAGAAATGGGGATTTACCCGCTGGAACAGAGAAGAATATGTTGCA CGCCGTAAGGATGGCTCCATCAAACCAGACGGTACCAATGTTCAATATTA TCCAAACAAGGGACCCTTGAAACAATGGAAATGGAGAGAAAGtagatgtt aa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000077_pilon | genome | sc0000077_pilon:568830..579561 + |
|