MSTRG.10870.1.p1 (mRNA) -

Overview
NameMSTRG.10870.1.p1
Unique NameMSTRG.10870.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000077_pilon:440786..443660-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10870.1.p1 ID=MSTRG.10870.1.p1|Name=MSTRG.10870.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2875bp|location=Sequence derived from alignment at sc0000077_pilon:440786..443660- (Clytia hemisphaerica_ch_hm2_pilon)
TGATGTTTTGGAAGGAGACACACATCAAACATAGAACACAAAATTTATGT
GAGTGATAGTTGCTTTATAAAACTTATAGTAAAATGCTTGGTATTGTCAG
TAAAATCAAATCGTTGAAACCAACTAAGATCGATCCAACAAAATGCGATC
CAAGGAGATCTTTATATCAACAGATTCTGAGAAACAGTGAAGCAACATCA
GAAAGACAAGAGAGGCAGTTCAATTTAGGGAGCACGTGTTTCACAAGTGA
TCCAGTATACGCGGCTAAATTCGTTCTTTGGAGAGAATACTGTGACAGCT
CACTTTTCGTTGAAGGTGAACACACTAGTGTCTTCATACCTCCGACGTTT
GCATCATGTCAGTACACGAACAATTCTCCAGTAGCTATCCTCGATTTTGA
AGTCAAGGCAGATATTGAGAGACTTGTAAACAATTTGCTTTATCATTCAC
CAGACTATTGGCTGACGATAGAATTACACAATTTTATGCAAACACAATCC
GGAGAACATCGCACTATCGACAAGAAGGAATTCGACCAGTGGGTTTTCAA
CCTTAAAATTATGTATCTGGTCATTGAAGAGTTGAACAATGAACAGTTGA
ATTTACCATCAACAACTTCCAGTATTGAAGTTTTCGTCCAAGCTTGCATT
AATAAATTTCCTTCGAATTCACCAGAGTCGGCACTGAAAACTCTTCTCAG
ACAGGATCTTTCCAGAAGAATCTCCAAAGACAAAAAGAATCTAAAAAAAC
TGGTTGAGGATAACCCACCACAAGACTCGAACCTTAAATGGCTTTTTGAT
TTGGAGTTGTCGCAGTTGGGAGAAAAGCACGAGCAGTGGATTTACAATCA
GTTGTTATCATTAAAAGATGACGTTCTCCAGGACACAGTTGTTCTTTCAT
CGCCCTGTTTTTTGACAAATGTGAAAAATAAAATGCACAAAGAGATGGAC
TTTTTGATAATCTCATGGAAGAGAAAACTCATAATATCTATTGAAGCAAA
ACGTTCGCTCTTCAGCGATAAAGCTTTTGATCAATTGGAATCGAACTTTC
GAATCTTTGAGGAACGGCTAGGAGATCAACTAGGATCCGAGTGGATCTTT
TTCCCCGTTGTCTGTGTAGAGAACGACTCCTATTTAATAAACAGTAAACA
TTACATCACCACTGAAACTGAAATTCAACCGTGGCTAACCAGTATTTTCA
GAGGATTCCCAACCGCACCAGTCATCATAAAACCGACTCTTCTTGATGAG
ACTAAAAACCTCCTTCAGATTTTAATCTTCGCATTACATATCATGAAAAA
GGACATAGTCGCACCTATTACCACCACAAACTGGGTCGAATACACAAGTA
ATGCGATTGACAATATCTCAACATGTCAGAACATCCTTTTCTACTCCAAC
CAACAAATGGCAATCATGAATCTTAGCGATACACGATATGGCAGGCTGAT
CATTTGTGGAAATTTTGGTGTTGGCAAAAGTTTATTGCTCCAGCAAAAAG
CAATACAAATAAACCAACAACCTCGATATCAAGGGAAAGTTATGTTTGTA
TCGGATCGCGTCGGCCAGAGATTAAATTCGATACTGAGTTATCGTCTGAT
GGTAGATTTAAAAGAAGATCACGGAATATTTGTCGAGGGAATGGTGAGTA
AAAGTAAACTTAATTACTGCACGATTTAACGTCCATGGTTCCCAGAAATT
GGGGTTGGGCGCCTTCCTCTGATGATCGTACGCCAGGCTGCCCGGTCGTT
AGTCAAGTCGACAGTCGCATTAACAATTTTGAGGTCATCTTTAATATTGT
CGATCTTTTTTCTTGTACGACATGACATTCAATGTTTCGATTCATTGTAT
TTCAGAATATTTTGAACTACATCTTAGTTCAGCTTAGTTGGTTGATGGGA
AAAAGCAGTTTTTAAAATTTTACACTTCTAGTCTCATTTTAACAGTTACT
GGTTTCTTTTATTTGTATATTGTCAATATTTTCATTTTGTTTACTCTTTC
ATCTTTTTACCTTAGGACATCAATTATCAACATTCAGATCTAATACAAAA
GGTCGAAAACTATGGTATCAAAGCAGTGTTTATCGACGAATGTGAGATGG
GATATACCAGCGATGGTCAGTGGATGAAAAAATTGATATCACTTGTCGAC
TTTTTGTGGATAGTCCCATCAACATCGATGTTATCTATGAGATCTCTTCT
AAGTAAATATGAGCGAGATTTTACTTTTCTGGATCTATCAAAAAACCTTA
GGAACACTCCACAGATCGTGCAAGCAGCTAAAGCAGAAGCTGAAAGAAGT
GAGTACCTATATGGTGAAGGGATTGCAATGCCTCCTCCAAATTTCCCTAA
AGGGAGAGATGCGATATTATCCAACTCATTCGAAGATGGGTTGAAAAAGG
CACGAATAATGACCAAGAGCGGTATCCTTGTTATCACTGACAACATCAAT
CACATTTCTAACGGGTCAGCCATGGATCAAATGCGCGAGAACTGGAAATC
GTTACATCCAGAAAGAAATGATTTTACAGATGACGAAAACCCATACAAGT
TTCTTACTCAGGGTAATATTTTGGTCATCGCAGGGAATCTATCTTTCGGT
TTCGAATGGCCGACCATTATATTATTTCAAGATGGAAATGATTATCAGTT
TGGTGGACCTTCCTTACATCGGTGTAATTTTATAATGAGATGTACAACCG
ATCTTATTATCGTTCGTACGGAAAATTAAAACTGTTTGAATATTAATTAT
TTTTAATGAAGAATATTCAGTGATGAAATGTACAGATTAACAAATTTGTC
AATCAGAATGTACAAATTGACACTTGATGCTAACTAAATGTTGAAAAATA
CATATTATTGGAATAATGTGTATAG

Coding sequence (CDS) from alignment at sc0000077_pilon:440786..443660-

>MSTRG.10870.1.p1 ID=MSTRG.10870.1.p1|Name=MSTRG.10870.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4548bp|location=Sequence derived from alignment at sc0000077_pilon:440786..443660- (Clytia hemisphaerica_ch_hm2_pilon)
GACATCAATTATCAACATTCAGATCTAATACAAAAGGTCGAAAACTATGG
TATCAAAGCAGTGTTTATCGACGAATGTGAGATGGGATATACCAGCGATG
GTCAGTGGATGAAAAAATTGATATCACTTGTCGACTTTTTGTGGATAGTC
CCATCAACATCGATGTTATCTATGAGATCTCTTCTAAGTAAATATGAGCG
AGATTTTACTTTTCTGGATCTATCAAAAAACCTTAGGAACACTCCACAGA
TCGTGCAAGCAGCTAAAGCAGAAGCTGAAAGAAGTGAGTACCTATATGGT
GAAGGGATTGCAATGCCTCCTCCAAATTTCCCTAAAGGGAGAGATGCGAT
ATTATCCAACTCATTCGAAGATGGGTTGAAAAAGGCACGAATAATGACCA
AGAGCGGTATCCTTGTTATCACTGACAACATCAATCACATTTCTAACGGG
TCAGCCATGGATCAAATGCGCGAGAACTGGAAATCGTTACATCCAGAAAG
AAATGATTTTACAGATGACGAAAACCCATACAAGTTTCTTACTCAGGGTA
ATATTTTGGTCATCGCAGGGAATCTATCTTTCGGTTTCGAATGGCCGACC
ATTATATTATTTCAAGATGGAAATGATTATCAGTTTGGTGGACCTTCCTT
ACATCGGTGTAATTTTATAATGAGATGTACAACCGATCTTATTATCGTTC
GTACGGAAAATTAAATGCTTGGTATTGTCAGTAAAATCAAATCGTTGAAA
CCAACTAAGATCGATCCAACAAAATGCGATCCAAGGAGATCTTTATATCA
ACAGATTCTGAGAAACAGTGAAGCAACATCAGAAAGACAAGAGAGGCAGT
TCAATTTAGGGAGCACGTGTTTCACAAGTGATCCAGTATACGCGGCTAAA
TTCGTTCTTTGGAGAGAATACTGTGACAGCTCACTTTTCGTTGAAGGTGA
ACACACTAGTGTCTTCATACCTCCGACGTTTGCATCATGTCAGTACACGA
ACAATTCTCCAGTAGCTATCCTCGATTTTGAAGTCAAGGCAGATATTGAG
AGACTTGTAAACAATTTGCTTTATCATTCACCAGACTATTGGCTGACGAT
AGAATTACACAATTTTATGCAAACACAATCCGGAGAACATCGCACTATCG
ACAAGAAGGAATTCGACCAGTGGGTTTTCAACCTTAAAATTATGTATCTG
GTCATTGAAGAGTTGAACAATGAACAGTTGAATTTACCATCAACAACTTC
CAGTATTGAAGTTTTCGTCCAAGCTTGCATTAATAAATTTCCTTCGAATT
CACCAGAGTCGGCACTGAAAACTCTTCTCAGACAGGATCTTTCCAGAAGA
ATCTCCAAAGACAAAAAGAATCTAAAAAAACTGGTTGAGGATAACCCACC
ACAAGACTCGAACCTTAAATGGCTTTTTGATTTGGAGTTGTCGCAGTTGG
GAGAAAAGCACGAGCAGTGGATTTACAATCAGTTGTTATCATTAAAAGAT
GACGTTCTCCAGGACACAGTTGTTCTTTCATCGCCCTGTTTTTTGACAAA
TGTGAAAAATAAAATGCACAAAGAGATGGACTTTTTGATAATCTCATGGA
AGAGAAAACTCATAATATCTATTGAAGCAAAACGTTCGCTCTTCAGCGAT
AAAGCTTTTGATCAATTGGAATCGAACTTTCGAATCTTTGAGGAACGGCT
AGGAGATCAACTAGGATCCGAGTGGATCTTTTTCCCCGTTGTCTGTGTAG
AGAACGACTCCTATTTAATAAACAGTAAACATTACATCACCACTGAAACT
GAAATTCAACCGTGGCTAACCAGTATTTTCAGAGGATTCCCAACCGCACC
AGTCATCATAAAACCGACTCTTCTTGATGAGACTAAAAACCTCCTTCAGA
TTTTAATCTTCGCATTACATATCATGAAAAAGGACATAGTCGCACCTATT
ACCACCACAAACTGGGTCGAATACACAAGTAATGCGATTGACAATATCTC
AACATGTCAGAACATCCTTTTCTACTCCAACCAACAAATGGCAATCATGA
ATCTTAGCGATACACGATATGGCAGGCTGATCATTTGTGGAAATTTTGGT
GTTGGCAAAAGTTTATTGCTCCAGCAAAAAGCAATACAAATAAACCAACA
ACCTCGATATCAAGGGAAAGTTATGTTTGTATCGGATCGCGTCGGCCAGA
GATTAAATTCGATACTGAGTTATCGTCTGATGGTAGATTTAAAAGAAGAT
CACGGAATATTTGTCGAGGGAATGGACATCAATTATCAACATTCAGATCT
AATACAAAAGGTCGAAAACTATGGTATCAAAGCAGTGTTTATCGACGAAT
GTGAGATGGGATATACCAGCGATGGTCAGTGGATGAAAAAATTGATATCA
CTTGTCGACTTTTTGTGGATAGTCCCATCAACATCGATGTTATCTATGAG
ATCTCTTCTAAGTAAATATGAGCGAGATTTTACTTTTCTGGATCTATCAA
AAAACCTTAGGAACACTCCACAGATCGTGCAAGCAGCTAAAGCAGAAGCT
GAAAGAAGTGAGTACCTATATGGTGAAGGGATTGCAATGCCTCCTCCAAA
TTTCCCTAAAGGGAGAGATGCGATATTATCCAACTCATTCGAAGATGGGT
TGAAAAAGGCACGAATAATGACCAAGAGCGGTATCCTTGTTATCACTGAC
AACATCAATCACATTTCTAACGGGTCAGCCATGGATCAAATGCGCGAGAA
CTGGAAATCGTTACATCCAGAAAGAAATGATTTTACAGATGACGAAAACC
CATACAAGTTTCTTACTCAGGGTAATATTTTGGTCATCGCAGGGAATCTA
TCTTTCGGTTTCGAATGGCCGACCATTATATTATTTCAAGATGGAAATGA
TTATCAGTTTGGTGGACCTTCCTTACATCGGTGTAATTTTATAATGAGAT
GTACAACCGATCTTATTATCGTTCGTACGGAAAATTAAATGCTTGGTATT
GTCAGTAAAATCAAATCGTTGAAACCAACTAAGATCGATCCAACAAAATG
CGATCCAAGGAGATCTTTATATCAACAGATTCTGAGAAACAGTGAAGCAA
CATCAGAAAGACAAGAGAGGCAGTTCAATTTAGGGAGCACGTGTTTCACA
AGTGATCCAGTATACGCGGCTAAATTCGTTCTTTGGAGAGAATACTGTGA
CAGCTCACTTTTCGTTGAAGGTGAACACACTAGTGTCTTCATACCTCCGA
CGTTTGCATCATGTCAGTACACGAACAATTCTCCAGTAGCTATCCTCGAT
TTTGAAGTCAAGGCAGATATTGAGAGACTTGTAAACAATTTGCTTTATCA
TTCACCAGACTATTGGCTGACGATAGAATTACACAATTTTATGCAAACAC
AATCCGGAGAACATCGCACTATCGACAAGAAGGAATTCGACCAGTGGGTT
TTCAACCTTAAAATTATGTATCTGGTCATTGAAGAGTTGAACAATGAACA
GTTGAATTTACCATCAACAACTTCCAGTATTGAAGTTTTCGTCCAAGCTT
GCATTAATAAATTTCCTTCGAATTCACCAGAGTCGGCACTGAAAACTCTT
CTCAGACAGGATCTTTCCAGAAGAATCTCCAAAGACAAAAAGAATCTAAA
AAAACTGGTTGAGGATAACCCACCACAAGACTCGAACCTTAAATGGCTTT
TTGATTTGGAGTTGTCGCAGTTGGGAGAAAAGCACGAGCAGTGGATTTAC
AATCAGTTGTTATCATTAAAAGATGACGTTCTCCAGGACACAGTTGTTCT
TTCATCGCCCTGTTTTTTGACAAATGTGAAAAATAAAATGCACAAAGAGA
TGGACTTTTTGATAATCTCATGGAAGAGAAAACTCATAATATCTATTGAA
GCAAAACGTTCGCTCTTCAGCGATAAAGCTTTTGATCAATTGGAATCGAA
CTTTCGAATCTTTGAGGAACGGCTAGGAGATCAACTAGGATCCGAGTGGA
TCTTTTTCCCCGTTGTCTGTGTAGAGAACGACTCCTATTTAATAAACAGT
AAACATTACATCACCACTGAAACTGAAATTCAACCGTGGCTAACCAGTAT
TTTCAGAGGATTCCCAACCGCACCAGTCATCATAAAACCGACTCTTCTTG
ATGAGACTAAAAACCTCCTTCAGATTTTAATCTTCGCATTACATATCATG
AAAAAGGACATAGTCGCACCTATTACCACCACAAACTGGGTCGAATACAC
AAGTAATGCGATTGACAATATCTCAACATGTCAGAACATCCTTTTCTACT
CCAACCAACAAATGGCAATCATGAATCTTAGCGATACACGATATGGCAGG
CTGATCATTTGTGGAAATTTTGGTGTTGGCAAAAGTTTATTGCTCCAGCA
AAAAGCAATACAAATAAACCAACAACCTCGATATCAAGGGAAAGTTATGT
TTGTATCGGATCGCGTCGGCCAGAGATTAAATTCGATACTGAGTTATCGT
CTGATGGTAGATTTAAAAGAAGATCACGGAATATTTGTCGAGGGAATG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10870MSTRG.10870Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10870.1.p1.exon2MSTRG.10870.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10870.1.p1.exon1MSTRG.10870.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10870.1.p1MSTRG.10870.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000077_pilongenomesc0000077_pilon:440786..443660 -