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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000077_pilon:390763..399589+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10867.2.p1 ID=MSTRG.10867.2.p1|Name=MSTRG.10867.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8827bp|location=Sequence derived from alignment at sc0000077_pilon:390763..399589+ (Clytia hemisphaerica_ch_hm2_pilon)
tttttattttcagaaaataatgtctgaaactaaacacaaacagaaaaatg
ggtccaaagaagaaaaatgaaaaaggaagtaaaaagaagaaagatgaaaa
gtcaaaagagcaaattgaaattacaaacaagttgaaaTTACTCTTGAAAG
ACTATGAGAAACAATGTTCATTATTGAAATCAACAGCAGATCCTGCTCTA
AAAGCTACACTGAAAGACTTTACAACTGAAGGGAAATACCTAACTCGGGT
AAGTTCCGTGTATTAAAAATCTTAGTTTTACGTACCTTTAGGGAACTTag
tttggcgggaactaattttggtgagcggcaaaagtcttaaaaatttttaa
ttttggtgggaactaattttggcgagtcaacgaaatttttaattttggtg
aggactaattttggcgaatgacagcgtaaatctgttctattttgccttac
tttgagcaattttgatgaatttcaggggttattaggcaaggaaacaaaaa
atttaatttattttggcgagtgagcaaaatatttaattttggcgggaact
aattttggcgaattttgtctaaattcgccaaatccgccaaaattagttcc
cgtcaaaataagttcccttaaggtaagtgTTTCAGTTTCACATCAAACAC
GTGTTTTATATCAGGCCGGTGTCTCTCCTAATGTTTTATGGTTGTGTTCG
ATCtcgtgctgaataaacaaaaaaatgtttttctttccttctttctaacc
aatattgctccacatctgtgtcaattcaatgtgaaaaaagtttgtgatat
aaaattgatgagtaagcaaacgatattaacttagtttaaaggttttattt
tttcataagtgttcccgtttcatatcagacacatatttcatatcaggaca
gtgtcttgctattgttatattatgctgatccaagcaaaaaatgtttttct
tttcctctttctgaccaatcttgctccacatccgtgtcaatccaatgtga
aataGCTTGTGAactaaaattgatgagtaagcaaacgataccacTCTTTA
AAAGCAAtgtttttcgtttattttgaatagtttttaaaaactgtaaattt
tataattcctgtcttgattttttaGTAGGCATAGTTACTCGATAGATCCT
TAAAGATACCACTAGAGTtttcagtgttaaaagttcttccgtctcagaca
gATTTCCGTCTCAGAGAAGTATATAGAGAgacttttccgtctcaaaatcc
ttcataattcaccaaaagttcaagaatatgtgctaatttgctgtgtaaaa
tccattttccgtctcaaacgaaaatcttgctttgaccactgagtTTTATA
AAATACTTATTCTTCTATATATTTTCACATAATAGTTTATTCTGAGAGGT
GCTCCGATTGTTGACGATACAACCAAAAATCTTCTCATCACAGATATCAA
CCAAACCCAAAACGATGAAGAAAAATACCTAGTCAAAATACATCCTCTTA
TTAAATCGCTTCGAAACCACTGGTATAAAACAGCCAAAGAATTTTATTTC
TGGGATTTGGATATCCCAAGAGAAGACATTTCAGAACTGGTATGGGTTTT
TACTTGATTTCTTTACAGAAATGAAAGAGTAAAatggatacacgcttttt
ttataagaaccaataaattttggttcaggctgggctgttcttattttttg
agattctaAGGTTTAAATGCTTTAAGATGTTCTGaatacgcttagtttct
ttacttacaCATTGAAAATGAGTTTTATATCTTTCTTATTAGTGTCTGAA
ATCTAacgctcagattgttcttaatttgttctaaggttttggccgatttt
catcctcgtgttcttataaactgttcttaaaaaaaaaaagcgtcTTCTAC
AAGTACTACAGTAATTACACGTAAAATCGTCAAGAGATAAATGAATTGCA
TTTTAGGCTCTTACTTTTTAAGTTGGGTGACATGACGATTTATTTTAAAG
CCGGGAATAGAATTGAATCTCCTGGAAAATGAGACTGTTTATTTCCAAAA
CGCGTGCGTGGCCTatgtggttttcacacaaacgccggacTTTGATTAAA
ATTCGAATGGATATAACTAAGCCAGGGATATTTGTTTCTTTTAGGATTAA
TTGATAAATCTTTGATTATTGAGAGTTGTTTATCATCTTTCAGGTCACTT
ACTTGAGTCATCGAAGTTACAACGTCGAATATATCGAGTTCCTTGATTGT
AAGATTGAGTGGTTTACGCTGAAAGCTTTTTCAAGGTAGATTGAAAAACT
AGTGTTACCCGGGGGAGGGGCAGTGGGTTCACAAACTGGCAGTATGTGTA
GTGCAAAAATTGGCTTCTGGAATCGAACCCGCAGAtttttttCCCGTCAA
CGGACGCAGACCTGAATTAGCGGtcgcagacctgatttagcggccgaaga
cctgaattaaaaaCCGAAGAAATGACGCAGCGGTCGAATACCTtttttaa
cggccgaagacctggagAAAATGCATTGtggaaatttgttataaatcttt
tttataaattcaatcaagatttttatatgatgtttcaatgggaaatagta
ttgaaaacaaattaagttaaaagatttttaactaaaaagaatgaaaatta
atgCCAATAACTTGTCTAGAATTACACCATCTTTCGTCTTCGATACCACT
GCACTAACCACTGGACCATCGCAACTGATTCCATGCCGAGTGGCTAAAGT
TTGTTTAACTGACCCTAACTTATCTATCAGGTATTCGGCCGGTGACttgc
taaatcaggtcttcgtCCGAtaaatcaggtcttcggccgctaaatcaggt
ctgacggaaaaaaatttacatCGCACACTTACGGTGCAGCAAAAAACTGA
aattcgtacccttacagtacattttttctcaaattttcagcttttttaga
gcaaaaataaaatcagaacTTTCTGctggatttgctgaaatttccaccca
tacagtgcatttatcaaaaagtcgacccttacagtgcatttctgctatct
tgaaaaacatacccttttAACTGCCGTGCATACCTGTCGGTCAATTTACC
CGACTCTCCACCCGACTCTCCACCCAGGGTGTTAACTACCttatgttttt
aaaatcaaaacacaaCCTTATCAATTCATTTTGTTGCTTTCAAAGATTCC
TTTTTCATCGCAGTAAAGAATTATTATTGAAAGTCTGAAAAGTTttacct
ttcaaaattttttcgatgttttcatattttcttacatAGTTGTTTTGCTG
TCAACGAAACATTAACTTCAGTTGTGCTGGACTATACCAAGTAAGTAAAT
ACTGTCtgctatgatttttttttttttgaaaaaacacaaTTCGCctaata
gtagggggccaagtcTCAGGTCCCGTGGCAACTTTTATAGGACTAAACGA
AACCTGTTCCATTTCAAAATTTAGTATataattagaattttttgagaaga
gtcaaatttttaaggcccgggaaattttttgtgaccaaaactgcaaggga
aaataaggggtagacAAATagctttaagaccaactaactgtcagctctac
tgtgattttGACGTAAAATCTTGTCTTGAGACTTGcccccccccTACTAT
Aacagtacatgttttttttatttataagtattgaaacaaaaatctaaaaa
ctggCTTGGAGATTATTGAAGGATATTCTAAGCAAAGTTTTATACCTCAC
TGCCCGTGCATTTTTAATTggggggagggggACTATGGAACAGATTTGAC
Tcgactacatgttttttttataagcataacgcttataagcatatgaaggc
tcagatttgcagaattcctaaacataacataagcatatatgtcagcctga
aatatttttcaagttgtcatttttatcggtttaaaaaggtttggtagaag
tcaagtaaaaaaaaagactttccacggtttcctacattccactgctccca
aaatctgaacaaagtTTTACGAAATTTccgaaatttcactaaaaacttgg
ctcgaggtgaatcataagcatgattcataagcatataataagcattaagc
ataaactatgcctgaaTGATttaagaacttaagcatacacgagcctgacc
aaggggcatacaattgcttataaaaaaaaaacatgtattgatATTATGAT
GTTGTCTACATTTAATTgcctgtaaatttattttttcagccttaaatttG
ACGGATTGGTTGGGTTATGTGATGGCTTACAATCAACCAAATCGGTCACC
AAGTTAAGTCTGTGTTATTGTCAGCTATCGCCGAAATGTGGCGCCGTTTT
GGGTGATCTTGTCTCCAAATCAACTATCAGGTGaattattggactatttt
ttagAGAATCTTTATCCAACCTCCTCCACTTCAATGTTGAGAATGTCATT
TTTGCAAGAAATTTCACTGACCCTCGACTCACGTATTTTTAGGTACGTAG
CCCCTCTTAAATGTAATTATGACCTCCTCGACATTAGGAttattttctgg
aatagccaaTCACGAGTTGAGTAATATTTGGTCAAAGAATATTGCCAGAA
TTatcatcaaatttgaataaaaccgATGAAATATCATGCTGACGTCAGTG
AAAATTACAGTGTATATCATGAAAGTTAAACCAGTTTGGGTATTACGCAA
AAAATCAACCAGTTTTGGACTCCTTTACTTTCGGTTAGTCGGATTAAATA
AAAAGAACGAAGGTCTGGGATAAAAAATGTGCTTTGTCTGAAAATTAAAG
CATACGGTTCGGAGTTCTTAATACTAACTTGATTTCAATTTTGCCAATCT
TGTCTACAGTGAACTGTACGTGGATGGGAACCAGTTGGAATGCGTAGGAC
TGATTGACATCTTACAAATCTTTGTTGATaaagcagaacaagaagccata
aaaagaaaagaagaaaagcaagccaagaTTGAGTCGGTGGTTGGGATGTA
CAGCGAGAATGAAAAGTAAGATAAAATCCATTGACGGGAGAATCTTATCG
TGTAAAAACATTTGAATGTCCTCCGTATCTTTTGATGTTGAAATAGTATC
AAAGTTAAAAgactttttcaacattttgacgttttttttttagctttatg
CGTACCAACTTCCCCAAGTAggaactttcgcgattttcgcgaattttggt
ctttttcgcgattttcgcgaattttggtctttttcgcgaaagtaaatgca
tttgaaaattgattcgcgaaagtttatgctcgcgaaaaattctctaaaaa
gttgaaaatctataaagcttccaaatcaaaatcaaaattattagTTGTTG
CATTTCTATGACTTAAAAGCGTCATTGAATTCAAAGAATACCCCTTTTAA
TCAAATTTAAGGAGTATTTGCGTCacttttaagccattttttggtgaaaa
ttttcattttgatcatccaattcgcgaaagtttatgctcgcgaaaaataa
tttttactcgaattcgcgaaagtaaatgtcgtaaatttcgcaAATATTCG
acatcgcgaaagtttgtacgcctaaagtactcgGCTCGAGTATTTAACTT
CGATTTTCTTCTGAATCGTGAAGAGTTTGGATTTGACacaatctgttttt
tttttctcgaaaaaaattaattacgatcttaattcattattttttgtttg
acgAGGTAGAACTTTTAGAAATTTGGGTTTACTTATGATTCTTTTATTGG
AATCATTAtcttttctctttctctttatGATTTGCATAACTTTCTAGAAA
ATCAGCAATATCCACTAAAACTACTGAACCAAACAGCACGAAAAATGCAT
CGTCAgctaaaaagaaaggaaaaaagaaagggcggaagaagaagaaatca
gCGAAGCCGAAATTGCCGCCCAAATGTGGTGCTTGGTTGAACGTACTACA
TGCTTCAGATGTTGGTTTCGATGGTATGTCGACGGATGTGAATGGTAACC
TATTGCATCAGAGCTTAATACTCATTCAAAGGTAAACTAAATGGATTtag
atttgctgatttttttatgggcttttttgtttgcttttttcgTTAAGTaa
aaaaaGCCATAAAAAGGATCTTGCTACATTGAATAAATCTTGACTGCTTA
TAGGTTTTCATATCAAACACATtcttcatatcaggacagtgtctgcatTT
TGTTATATTGGGCTGATATGAGGCTGATATCAGCCAAAaattgcttttct
tttcctctttttgaccaatcttgctccacatccgtgtccaatatcaaaaa
gctcgtaaatcaaaattgatgagtaagcaaacgatatcactcttatttaa
aaacaaaacttttagaGCTAATGTTAGTTTTTAAACTTATTAACTTTCTA
CGAACGAGTTTCAAATAAAGACAGGAAAAAGGCTCTAACGATgtgaaaat
tgttcaaatttcACATTAATCTGCTCTAATCCTCATTATAATTTTCTACG
TCCCTGTTTTGTTTAGGTAATCTTTATATTATCCCATTCTGCCACTAAAT
TGGAAATTCCCTAATGATGACGACTTGAATcactcaatcaatcaatttcc
AATGTTCTTTCATTGTTTTCTATTCAGGTGGATCATATTTTCGGAGGATT
TAAAGGAGATTGACTTAGACGATAACTTGATCGGTGAATTGGGTGGCCTC
GAGATATTATCCGCCCTTCGCCAAAGAAAAGaaggtatatattttttaga
ctTATCTCTAGTTGAGCTATGCATTGGTCTTGTCGAACTCGGTTAGCTGC
TTTGCGGTGGTTTAAATTCTCGAGCGATTCGCACCCCTTAAATATAAAGT
TGTGTCAACAAATTACGAGTAATCAGAGAAGAACATCAATCCATATATGT
TCTGCCATGTTTCACCAAATTCGATTGAGCTAAACTTACGAAATCTTTTC
GCTTTTTCCCGTCCTGTATATAGGCTTAAAATGCTTAACTGATTTTGCCA
TCAGTTTGGACGACATAGAgacttgaaaaaagaaaaagtccgTGTTTTAT
ATTTAAAAGTAGATCTGCAAACTCCAGAATAATTGACAATGGTCTTGCGA
TTAAGAGAATTAACCAGCGTCGGGCGGCTGAAATTGTTTCTGGTCATGAG
CGAAAGTCGGATGTTAAGATGTTCTGATTTAAAGCCACTTCAATGGATTT
TGATTTGAAGCCAATTCAGTCAAGCCAATTAATTTCTTCTAATCtttttt
tGCAGAGGGCTTGAAACCGATTTACATGAAAGTCACTCATCGTATGGATA
CCCAAGTCTTCAAAAATATTCTCAGCCTCGCTTCAGGAAAATCAAAACGA
GGcgggaagaaaaagaaaaagaagaaaggcaATGGAAAGGTAATCATCAT
TCTGAACaaccttactcttaggtgccaaataaacgccccccccgcttgtt
aagttttcgatttttttccaacccccccccggatcttattaggacccctc
gtttattagtttttgaaaaagttcccagccaccaaaaggaaagttctttg
ttttactctaaacagcctaaatttagtctatcttgaccctttttagggtt
tttaaaggtccattttccaatcCCCCGGTAATTatgtccccccgtttatt
taatttgaaaaatttttccaaccccccctgtttattcgaacccccccccc
ccccgttcatTTGgcttatttggcacctaagagtacataaTAATCCTGTT
AACAATAAAAACACGGTTATCTTTATAATCATGTTTTGCTTCATGTTATT
TTCCTTTCGTAAAATTTTTACAAGCAAATTACATTCATTGTTCTAGGGAC
CCGACCGACCTTGTTATTTtactgaaatttaaaaaatgataatacTGTAT
CGAATTTCCACTGCTGTAATCgcgttcaaaaaaaaaatgctaaTCAAGCA
ATGGACAAAGGCGACATTTCTGGTTTACTGTTGAATGGCTAAACCCTCAT
TCCTTAGAAAACTTTCCTGGCGAGTTTCTTTGGTAATTTCCCACTGTTTA
TTGGTGTTTCAAGCTGTTGGGCCCGAGCCAAAaattttgagggtgtaaaa
taggacccttatggctcgcacataacCAACaaccattttgcctaagtaca
cgCACCTGGAGGTACATCGCGTATGCGTATGCGAACATGTACAAAGGCAT
GGGGAAGTCATGGGGAAGTTTGCGGCTTTGTAACTGATCGCTTCAGTTGA
TTTTTCACCTTTTAAGAGTCTTGTTCCTTTTTCATTGCAGGGTTGAAATG
AGAAGGTTTTCCCGGAAATGCGTTTAGCCGTTGCACGGTAATTTCTTACA
TGATAGGACACTTTGTGTTACTTTAAATGATCCCTTTTAACAGTAGCTAT
AACGAATAAAATTATGTTTTCTTGTTTAGAAGAGAGTATGAATCGCACTG
AAATCCAAATTGGAGGATGTCTTTCTGAACATTGCCAgcaattcaatttt
tgatggCACATTTAGCTGCTTTTGATCAAAAACGGTTACTAAACTGGTAA
TGGAATACCTGTGTATGAGATTTTTTATAAACTTGTAAATTTGTCAATAG
AAAATGCAACATACATGATAACTTATTTTTGTCGTTTGAAACTtgtatta
atttatttttttaatgaattttagtGTCTGATAAACTTACGTTGAGTGGT
GTATATATTTTGCCCCACCGAAAGAAACTGTTAAAAATgtgtttaatttg
atttttttcgtatttttcagCCTTTCCAACATCTTCACTTTTTCCCTCCC
cctccccgcgaaaatttcttctccagC Coding sequence (CDS) from alignment at sc0000077_pilon:390763..399589+ >MSTRG.10867.2.p1 ID=MSTRG.10867.2.p1|Name=MSTRG.10867.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2535bp|location=Sequence derived from alignment at sc0000077_pilon:390763..399589+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTACAGCGAGAATGAAAAAAAATCAGCAATATCCACTAAAACTACTGA
ACCAAACAGCACGAAAAATGCATCGTCAgctaaaaagaaaggaaaaaaga
aagggcggaagaagaagaaatcagCGAAGCCGAAATTGCCGCCCAAATGT
GGTGCTTGGTTGAACGTACTACATGCTTCAGATGTTGGTTTCGATGGTAT
GTCGACGGATGTGAATGGTAACCTATTGCATCAGAGCTTAATACTCATTC
AAAGGTGGATCATATTTTCGGAGGATTTAAAGGAGATTGACTTAGACGAT
AACTTGATCGGTGAATTGGGTGGCCTCGAGATATTATCCGCCCTTCGCCA
AAGAAAAGaagAGGGCTTGAAACCGATTTACATGAAAGTCACTCATCGTA
TGGATACCCAAGTCTTCAAAAATATTCTCAGCCTCGCTTCAGGAAAATCA
AAACGAGGcgggaagaaaaagaaaaagaagaaaggcaATGGAAAGAAGAG
AGTATGAATGTACAGCGAGAATGAAAAAAAATCAGCAATATCCACTAAAA
CTACTGAACCAAACAGCACGAAAAATGCATCGTCAgctaaaaagaaagga
aaaaagaaagggcggaagaagaagaaatcagCGAAGCCGAAATTGCCGCC
CAAATGTGGTGCTTGGTTGAACGTACTACATGCTTCAGATGTTGGTTTCG
ATGGTATGTCGACGGATGTGAATGGTAACCTATTGCATCAGAGCTTAATA
CTCATTCAAAGGTGGATCATATTTTCGGAGGATTTAAAGGAGATTGACTT
AGACGATAACTTGATCGGTGAATTGGGTGGCCTCGAGATATTATCCGCCC
TTCGCCAAAGAAAAGaagAGGGCTTGAAACCGATTTACATGAAAGTCACT
CATCGTATGGATACCCAAGTCTTCAAAAATATTCTCAGCCTCGCTTCAGG
AAAATCAAAACGAGGcgggaagaaaaagaaaaagaagaaaggcaATGGAA
AGAAGAGAGTATGAATGTACAGCGAGAATGAAAAAAAATCAGCAATATCC
ACTAAAACTACTGAACCAAACAGCACGAAAAATGCATCGTCAgctaaaaa
gaaaggaaaaaagaaagggcggaagaagaagaaatcagCGAAGCCGAAAT
TGCCGCCCAAATGTGGTGCTTGGTTGAACGTACTACATGCTTCAGATGTT
GGTTTCGATGGTATGTCGACGGATGTGAATGGTAACCTATTGCATCAGAG
CTTAATACTCATTCAAAGGTGGATCATATTTTCGGAGGATTTAAAGGAGA
TTGACTTAGACGATAACTTGATCGGTGAATTGGGTGGCCTCGAGATATTA
TCCGCCCTTCGCCAAAGAAAAGaagAGGGCTTGAAACCGATTTACATGAA
AGTCACTCATCGTATGGATACCCAAGTCTTCAAAAATATTCTCAGCCTCG
CTTCAGGAAAATCAAAACGAGGcgggaagaaaaagaaaaagaagaaaggc
aATGGAAAGAAGAGAGTATGAATGTACAGCGAGAATGAAAAAAAATCAGC
AATATCCACTAAAACTACTGAACCAAACAGCACGAAAAATGCATCGTCAg
ctaaaaagaaaggaaaaaagaaagggcggaagaagaagaaatcagCGAAG
CCGAAATTGCCGCCCAAATGTGGTGCTTGGTTGAACGTACTACATGCTTC
AGATGTTGGTTTCGATGGTATGTCGACGGATGTGAATGGTAACCTATTGC
ATCAGAGCTTAATACTCATTCAAAGGTGGATCATATTTTCGGAGGATTTA
AAGGAGATTGACTTAGACGATAACTTGATCGGTGAATTGGGTGGCCTCGA
GATATTATCCGCCCTTCGCCAAAGAAAAGaagAGGGCTTGAAACCGATTT
ACATGAAAGTCACTCATCGTATGGATACCCAAGTCTTCAAAAATATTCTC
AGCCTCGCTTCAGGAAAATCAAAACGAGGcgggaagaaaaagaaaaagaa
gaaaggcaATGGAAAGAAGAGAGTATGAATGTACAGCGAGAATGAAAAAA
AATCAGCAATATCCACTAAAACTACTGAACCAAACAGCACGAAAAATGCA
TCGTCAgctaaaaagaaaggaaaaaagaaagggcggaagaagaagaaatc
agCGAAGCCGAAATTGCCGCCCAAATGTGGTGCTTGGTTGAACGTACTAC
ATGCTTCAGATGTTGGTTTCGATGGTATGTCGACGGATGTGAATGGTAAC
CTATTGCATCAGAGCTTAATACTCATTCAAAGGTGGATCATATTTTCGGA
GGATTTAAAGGAGATTGACTTAGACGATAACTTGATCGGTGAATTGGGTG
GCCTCGAGATATTATCCGCCCTTCGCCAAAGAAAAGaagAGGGCTTGAAA
CCGATTTACATGAAAGTCACTCATCGTATGGATACCCAAGTCTTCAAAAA
TATTCTCAGCCTCGCTTCAGGAAAATCAAAACGAGGcgggaagaaaaaga
aaaagaagaaaggcaATGGAAAGAAGAGAGTATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000077_pilon | genome | sc0000077_pilon:390763..399589 + |
|
