MSTRG.10864.3.p1 (mRNA) -

Overview
NameMSTRG.10864.3.p1
Unique NameMSTRG.10864.3.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000077_pilon:328339..332130-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10864.3.p1 ID=MSTRG.10864.3.p1|Name=MSTRG.10864.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3792bp|location=Sequence derived from alignment at sc0000077_pilon:328339..332130- (Clytia hemisphaerica_ch_hm2_pilon)
CATAATAATTTGTTCATTTTTTATTTCTTTCCAGTGGTTGAAAAAAGACA ATAAAATATAATCACAGAGAGATAGAGACAGAAGTTTCTGCAGAGGAATA AAAATATTTTCAGTTTGAAAGAAGCATATTGCTGACTGGTTGTTAAGGAT ATCAATAATTTTTATTTTTTGGAAAAAATGGGAAATTCAACAAGCAAAAA CAAGACTAAGGAGAGTGCAGGTGAGATTTCGTTTTTATTTTGATTTTACA TTCCCATAAAGATTCTGCAACGGTTTTATTTATTCTTGCTAAAAACTAAA TTAATATTTAGGCACACTTTCTCTCTTTAATTAAGGATCGTTAGTATTTC TGCTGAAGTTGTCAATTACAGCGAGAAAGTCTTTCTTCCTAATAATGAAA GTTTTTTCCTTTTTCTATTTTTTGTTTATCATTGTTTTTGCTTCACTAAA ATAATTTTAAATTGGATCAGGACCTGCGTCTTAATGCTAACACAACATCT TAGCTGGCACTGGGCGAAATAAGAGATTTCCATGTTGAAAATATGATATT TCCATATACTTTTGTAAATATCATATTTTCAAAATATTTCCAACTTTTGG AAATATGATATTTCCAAAAATTGGAAATATCATGAAATATGATATTTCCA CAACTTTGGAAATATGGAAAAGTCATATTTTTATATTTTCAAGATATTTC CAGGATTGGAAATCTCTTATTTCGCCCAGTGTGTATTTTCGACAAAGATT CACTCAAATCGATAAAAGGAGTGACTAATACTTTCAGGAACTGAAGGAAT TTAACTTTGCACGCAGACTCCTTCTGCTATATATATTGAACGAAAATGAC GAGATTTCTCCACTTTTTTATAACAATTTTAGCTGTAAAGGAAACTGTTT CATAAAATAACTCACTGTAATGACAGTTTACAATCAGAAATATGTTCGTT ATGTGGTTTTAATAAATTTTACCCAGCTATAAGCAGTGCAATGATAGATT TTCATGACTTGATAGTTTGATTGTACACAGTAGTGATTATTTTGTATCCC CCGTCTGATTAGCACTTGTGAAAAAATGCCCGAGGGGAGCAGCCCAGTTA CATTGAAAAACAATGAATGATGACTCCAACAATCCCTGAGAAACTTCTGA AAAACTAGAAAACTATTTTAAAAAACTATATTAGCAGTAGTATTTCAAGA CCTGTGTCTCGGTGGCTCGGAAACTTGAAATCAATGGGGATTGAGAACTC CGCCCATCCCACCAAAATCTTCCAAAATCTCCTGTTTGAGCGAGAAGGTA TTTACGATGATAATTAGTCATTGAATGAAAGATTCAAATTTATACAGGAA AGAGTAAAAAATTGAAAGATAAACTCACTTTTCAAAGAGAAAGAGACGAA GGAATAATCATAATTCATCCTTTCCACATGTTATATAATCCTGTAATATT CCTTATCTTTCATTGAACTCATTCAATCAATTTGTTATCATAACGTAAAG CATGAATGGCGCACCCTGTGGACCCTGTTTTGATAGTGAAATCCTCCTTA AGCTCTTATTAAGCCCTTCTAATCACGCATTATGAGTTTTTGAAAATGAT CCGTGTGTCTGGATTTCTCATTCCCCCTTTTTTCAATTGATTATATATTA CATTGTGTAAGCCTGCGACACGTAAACCCCTTCTTGATTTGCTGGGGCCT CAAAAGCCCTACACAAAGTCCTGTACATTTCTTCTCCAATCTGAAGAACT ATTGCAGTGATAATCATTTTCTAAGCTTTTGAAAGAATATGCCTTGAAGC AGAGAGAAGCATCAAAGGATTTGATATTTGTAAAATATATAAGCTTTTTT ATAAAGGCTGTTTTAATTTTTTCGTGATTTTAAGGTTTAAATATTTGAAA AAATGTGACAAGCTCGAAATATGAAATCAATCTGCTTTACACAAATCTCC ATCAGCTTCAAGTTGGGGTGAATACGTTAGATCTTCCAAATAAGAGGGAG GGAATATATTATCGCTATGGAATTTTTCTTCTATTCTTTCTCTTAAATGG ACTTTGAACTTTCGAAAAGATAAAACCTCAGTATTAAACAACTTTTTTTG TCATATCTTTCTTTCTTTTAATATCATATCTTTTTTTCACTGATACTTAT CTCTTGGAATGTCAAGAGCAAGAGATGATGTAACTTCTGTAAATATCCAA TTCAAAACGTGACTTGATCCATGCCAACTGTATTCCGTATCATTTATATG CTCGAATAAAATTATAAAGTGCCCCTAAGTATAACCTTAAATTCAAGCTA ACATATTTAATCTTCAGCATAAATATCATTTTCTTAACACTCTTTCAGCT CAAAACGGCAAAGCTCCTGCTCCAGCAACTGAAGAGGAAGTGATCAAAAC TCCCACCGCCGAGCCAGAGGCCCCTGCTGCCGAAGCTCCTGCCGCCGAAC CTGAAGCTCCCGCCGCCGAACCTGAACTCCCGACCGAACCTGAAGCCCAC CGCAGAACCAGAGCTCTGCTGCCGAACCAGAAGTACCAGCAGCCTCACCA GAGGCACCTGCCGCCGAACCTGAAGCACCTGCTGCCGAACCAGAAGCACC AGCAGCCGAACCAGAGGCACCTGCCGCCGAACCAGAGGCTCCTGCCGCTG AACCTGAAGCTCCCGCCGCCGAACCAGAAGCACCAGCAGCCGAACCAGAG GCACCAGCAGCCGAACCAGAGGCTCCCGCCGCCGAACCAGAAGCACCAGC AGCCGAACCAGAGGCACCTGCCGCCGAACCAGAAGCACCAGCAACCGAAC CAGAGGCATCTGTCGCCGAACCAGAGGCTCCTGCCGCCGAACCAGAAGCA CCAGCAGCCGAACCAGAAGGCACCTGCCGCCGAACCAGAGGCTCCTGCCG CCGAACCTGAAGCACCAGCAGCCAAAACCAGAAGCACCAGCAGCCGAACC TGAAGCACCAGTAGCCGAACCTGAAGCACCAGCAGCCGAACCAGAAGCAC CAGCAGCCGAACCAGAGGCTCCTGCCGCCGAACCAGAAGCACCAGCAGCC GAACCAGAGGCACCTGCCGCCGAACCAGAGGCTCCTGCCGCCGAACCTGA AGCACCAGCAGCCGAACCAGAAGCACCAGCAGCCGAACCTGAAGCACCAG CAGCCGAACCAGAAGCACCAACAGCCGAACCAGAGGCTCCTGCCGCCGAG CCTGAAGCTCCTGCTGCTGAACCAAAAGCACCTGCTGCCGAGCCAGAGGC CCCAGCAGCCGAACCAGAAGCCCCGAAAGTAGAGCCAGAAGCCCCAAAAG TAGAACAGACTGAATCTAATCCAACAGAGGAAGCAAAATCGAGTTAAAAC AAGGGGTGTTGTTAGTCTTCAGTTATCTTTTTTACAAAATGAAAATGTAG CTCAAAGGTTAGAATAACCAAATATAGCGGAAGAGAATGTTTATCGTTGC TCGTGGATGACTATCAAAGATGAATTCCATCAATAAAACTGTTGAAAATG CTACATCAGTGGAAAAAACATTGTGAATAAATGAATTTCTAATTAAACAG AGAGAACGCTTGGTGATAGACTCACATAATGCATGCATAAACACGAACGT CGAAAATATTTGTGAGAATGGTCAGAGATCTCATAATTATGAAGTTCCTT CTTTCTCGATGAAAATAACCTTATTTTTGTAAATAATAAACTTGAGTTTT AAAATCAAAACACAGTCTAGTCTAGTCACGCAAAATCTTGGCTACAATCA ATTCATCTGATTAGTCATTTTATTTTACCATTTGTAAATCTG

Coding sequence (CDS) from alignment at sc0000077_pilon:328339..332130-

>MSTRG.10864.3.p1 ID=MSTRG.10864.3.p1|Name=MSTRG.10864.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2610bp|location=Sequence derived from alignment at sc0000077_pilon:328339..332130- (Clytia hemisphaerica_ch_hm2_pilon)
CACCAGCAGCCGAACCAGAAGCACCAGCAGCCGAACCAGAGGCTCCTGCC
GCCGAACCAGAAGCACCAGCAGCCGAACCAGAGGCACCTGCCGCCGAACC
AGAGGCTCCTGCCGCCGAACCTGAAGCACCAGCAGCCGAACCAGAAGCAC
CAGCAGCCGAACCTGAAGCACCAGCAGCCGAACCAGAAGCACCAACAGCC
GAACCAGAGGCTCCTGCCGCCGAGCCTGAAGCTCCTGCTGCTGAACCAAA
AGCACCTGCTGCCGAGCCAGAGGCCCCAGCAGCCGAACCAGAAGCCCCGA
AAGTAGCTCAAAACGGCAAAGCTCCTGCTCCAGCAACTGAAGAGGAAGTG
ATCAAAACTCCCACCGCCGAGCCAGAGGCCCCTGCTGCCGAAGCTCCTGC
CGCCGAACCTGAAGCTCCCGCCGCCGAACCTGAACTCCCGACCGAACCTG
AAGCCCACCGCAGAACCAGAGCTCTGCTGCCGAACCAGAAGTACCAGCAG
CCTCACCAGAGGCACCTGCCGCCGAACCTGAAGCACCTGCTGCCGAACCA
GAAGCACCAGCAGCCGAACCAGAGGCACCTGCCGCCGAACCAGAGGCTCC
TGCCGCTGAACCTGAAGCTCCCGCCGCCGAACCAGAAGCACCAGCAGCCG
AACCAGAGGCACCAGCAGCCGAACCAGAGGCTCCCGCCGCCGAACCAGAA
GCACCAGCAGCCGAACCAGAGGCACCTGCCGCCGAACCAGAAGCACCAGC
AACCGAACCAGAGGCATCTGTCGCCGAACCAGAGGCTCCTGCCGCCGAAC
CAGAAGCACCAGCAGCCGAACCAGAAGATGGGAAATTCAACAAGCAAAAA
CAAGACTAAGGAGAGTGCAGCACCAGCAGCCGAACCAGAAGCACCAGCAG
CCGAACCAGAGGCTCCTGCCGCCGAACCAGAAGCACCAGCAGCCGAACCA
GAGGCACCTGCCGCCGAACCAGAGGCTCCTGCCGCCGAACCTGAAGCACC
AGCAGCCGAACCAGAAGCACCAGCAGCCGAACCTGAAGCACCAGCAGCCG
AACCAGAAGCACCAACAGCCGAACCAGAGGCTCCTGCCGCCGAGCCTGAA
GCTCCTGCTGCTGAACCAAAAGCACCTGCTGCCGAGCCAGAGGCCCCAGC
AGCCGAACCAGAAGCCCCGAAAGTAGCTCAAAACGGCAAAGCTCCTGCTC
CAGCAACTGAAGAGGAAGTGATCAAAACTCCCACCGCCGAGCCAGAGGCC
CCTGCTGCCGAAGCTCCTGCCGCCGAACCTGAAGCTCCCGCCGCCGAACC
TGAACTCCCGACCGAACCTGAAGCCCACCGCAGAACCAGAGCTCTGCTGC
CGAACCAGAAGTACCAGCAGCCTCACCAGAGGCACCTGCCGCCGAACCTG
AAGCACCTGCTGCCGAACCAGAAGCACCAGCAGCCGAACCAGAGGCACCT
GCCGCCGAACCAGAGGCTCCTGCCGCTGAACCTGAAGCTCCCGCCGCCGA
ACCAGAAGCACCAGCAGCCGAACCAGAGGCACCAGCAGCCGAACCAGAGG
CTCCCGCCGCCGAACCAGAAGCACCAGCAGCCGAACCAGAGGCACCTGCC
GCCGAACCAGAAGCACCAGCAACCGAACCAGAGGCATCTGTCGCCGAACC
AGAGGCTCCTGCCGCCGAACCAGAAGCACCAGCAGCCGAACCAGAAGATG
GGAAATTCAACAAGCAAAAACAAGACTAAGGAGAGTGCAGCACCAGCAGC
CGAACCAGAAGCACCAGCAGCCGAACCAGAGGCTCCTGCCGCCGAACCAG
AAGCACCAGCAGCCGAACCAGAGGCACCTGCCGCCGAACCAGAGGCTCCT
GCCGCCGAACCTGAAGCACCAGCAGCCGAACCAGAAGCACCAGCAGCCGA
ACCTGAAGCACCAGCAGCCGAACCAGAAGCACCAACAGCCGAACCAGAGG
CTCCTGCCGCCGAGCCTGAAGCTCCTGCTGCTGAACCAAAAGCACCTGCT
GCCGAGCCAGAGGCCCCAGCAGCCGAACCAGAAGCCCCGAAAGTAGCTCA
AAACGGCAAAGCTCCTGCTCCAGCAACTGAAGAGGAAGTGATCAAAACTC
CCACCGCCGAGCCAGAGGCCCCTGCTGCCGAAGCTCCTGCCGCCGAACCT
GAAGCTCCCGCCGCCGAACCTGAACTCCCGACCGAACCTGAAGCCCACCG
CAGAACCAGAGCTCTGCTGCCGAACCAGAAGTACCAGCAGCCTCACCAGA
GGCACCTGCCGCCGAACCTGAAGCACCTGCTGCCGAACCAGAAGCACCAG
CAGCCGAACCAGAGGCACCTGCCGCCGAACCAGAGGCTCCTGCCGCTGAA
CCTGAAGCTCCCGCCGCCGAACCAGAAGCACCAGCAGCCGAACCAGAGGC
ACCAGCAGCCGAACCAGAGGCTCCCGCCGCCGAACCAGAAGCACCAGCAG
CCGAACCAGAGGCACCTGCCGCCGAACCAGAAGCACCAGCAACCGAACCA
GAGGCATCTGTCGCCGAACCAGAGGCTCCTGCCGCCGAACCAGAAGCACC
AGCAGCCGAACCAGAAGATGGGAAATTCAACAAGCAAAAACAAGACTAAG
GAGAGTGCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10864MSTRG.10864Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10864.3.p1MSTRG.10864.3.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10864.3.p1.exon3MSTRG.10864.3.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10864.3.p1.exon2MSTRG.10864.3.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10864.3.p1.exon1MSTRG.10864.3.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000077_pilongenomesc0000077_pilon:328339..332130 -