MSTRG.10857.1.p1 (mRNA) -

Overview
NameMSTRG.10857.1.p1
Unique NameMSTRG.10857.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000077_pilon:271471..272657-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10857.1.p1 ID=MSTRG.10857.1.p1|Name=MSTRG.10857.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1187bp|location=Sequence derived from alignment at sc0000077_pilon:271471..272657- (Clytia hemisphaerica_ch_hm2_pilon)
GTAAACTCTGTATAAAAGGAGTTGGAGATTCTCAGTCAAATCACATCAAC
TCATCATCAGCTTACTACTGACTCAACAACAAACAGCCAGTAGTAAACCC
TCTTGAAGATTCGTCAACTCATCAAACCAAACAACTAACTAAATCAATCA
TGAAGACCGCCATCTTTTTTGCAGCTTTTTTGGCAGGTATAACACGTCAG
TCAATCCTCATTTTACTCAACTCAAGTTATGTTTCTGCTGCAAATCATGG
ATAGACTTTCTCACTGAATCTGGATTGGTCTTCAAATACTGTAAAATCTA
CACGGAGGCAGTCTTTATTCTTTAATAGTACATGTTTATGGCTTCTATAC
TAGTTCAAGATACATTCTCGATACATAAATTTAGCTCTATTTTCCCATAT
GAATCTTTGACTTTCTTTTTTTCAGTCGCCCTGGCTGATTTGACATTCTG
GGAAGAGAGAATGTCCACGGAGAAGAAAAACGATGCTCTCCCAGAAGTAC
CATGCCCTGACACCTTGTGCAATGGAAAAGCTGATGGAAACCATTATTAC
TACCCATACTACACTGGTGCTTACAGATACAACTTCTTCCTCCAATGCTT
AGGTGGAAAAGCTACCTGCCAAGCTTGTTTCCCATTGTCCTTGGAATACA
GCTATGAATGCAACCAATGTTTGTACAAGAAATCTGATGCTTGCGTCACC
ACAAAACCATGGAAACCAGTCACCACTTTCACTTGTCCAGACAGATGTCC
ATCTTATGGACCTAAATACACTGGCAATGTCGCTGATCCAGCTCAAAGCA
AACAATACGTTGCATGCTGGGAAGGTGTGACTGTTGGATGTATTGCTTGT
CCAGGAAACTTGATGTTTAACGAACAAGAGAACGCTTGTTTGTTTGAAGG
AAAATACATCACTGAGCCAACCAAACAGTAAATCATCAATCGAAATCACC
AATGAACGTTTGAAATTGGGAAATTGAATTCCTTTTAACAATACATTTAC
TTTATTGATCAAAAATATTACTACCGCTTATTACCGCACTTTTTCTTTCT
CTATCACTTTTCATCCTTGCTACTGTTCTAACTCAAGAAATTTCTTCTTT
TCTCCATCTGTTGCTACTGTTTTTTCTAGACGTCTTTCAATAAAGTTTTT
TCTAGTCTTATTCTATTCTGTTCATTTCTAGTTCTTC

Coding sequence (CDS) from alignment at sc0000077_pilon:271471..272657-

>MSTRG.10857.1.p1 ID=MSTRG.10857.1.p1|Name=MSTRG.10857.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1086bp|location=Sequence derived from alignment at sc0000077_pilon:271471..272657- (Clytia hemisphaerica_ch_hm2_pilon)
TCGCCCTGGCTGATTTGACATTCTGGGAAGAGAGAATGTCCACGGAGAAG
AAAAACGATGCTCTCCCAGAAGTACCATGCCCTGACACCTTGTGCAATGG
AAAAGCTGATGGAAACCATTATTACTACCCATACTACACTGGTGCTTACA
GATACAACTTCTTCCTCCAATGCTTAGGTGGAAAAGCTACCTGCCAAGCT
TGTTTCCCATTGTCCTTGGAATACAGCTATGAATGCAACCAATGTTTGTA
CAAGAAATCTGATGCTTGCGTCACCACAAAACCATGGAAACCAGTCACCA
CTTTCACTTGTCCAGACAGATGTCCATCTTATGGACCTAAATACACTGGC
AATGTCGCTGATCCAGCTCAAAGCAAACAATACGTTGCATGCTGGGAAGG
TGTGACTGTTGGATGTATTGCTTGTCCAGGAAACTTGATGTTTAACGAAC
AAGAGAACGCTTGTTTGTTTGAAGGAAAATACATCACTGAGCCAACCAAA
CAGTAAATGAAGACCGCCATCTTTTTTGCAGCTTTTTTGGCAGTCGCCCT
GGCTGATTTGACATTCTGGGAAGAGAGAATGTCCACGGAGAAGAAAAACG
ATGCTCTCCCAGAAGTACCATGCCCTGACACCTTGTGCAATGGAAAAGCT
GATGGAAACCATTATTACTACCCATACTACACTGGTGCTTACAGATACAA
CTTCTTCCTCCAATGCTTAGGTGGAAAAGCTACCTGCCAAGCTTGTTTCC
CATTGTCCTTGGAATACAGCTATGAATGCAACCAATGTTTGTACAAGAAA
TCTGATGCTTGCGTCACCACAAAACCATGGAAACCAGTCACCACTTTCAC
TTGTCCAGACAGATGTCCATCTTATGGACCTAAATACACTGGCAATGTCG
CTGATCCAGCTCAAAGCAAACAATACGTTGCATGCTGGGAAGGTGTGACT
GTTGGATGTATTGCTTGTCCAGGAAACTTGATGTTTAACGAACAAGAGAA
CGCTTGTTTGTTTGAAGGAAAATACATCACTGAGCCAACCAAACAGTAAA
TGAAGACCGCCATCTTTTTTGCAGCTTTTTTGGCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10857MSTRG.10857Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10857.1.p1.exon2MSTRG.10857.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10857.1.p1.exon1MSTRG.10857.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10857.1.p1MSTRG.10857.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000077_pilongenomesc0000077_pilon:271471..272657 -