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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000077_pilon:221351..225553- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10853.2.p1 ID=MSTRG.10853.2.p1|Name=MSTRG.10853.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4203bp|location=Sequence derived from alignment at sc0000077_pilon:221351..225553- (Clytia hemisphaerica_ch_hm2_pilon)
TCAAATGTTTGAATCGCGATCAAACCAATTAAACATACTAGAATAATTGC
AATTCGGTTGTCAAGCGTAATTGAATCGCAATGTCAATGTCGGTCCATTT
CTGAGTTATATTCAATTGGCTTCAATTGATTCAACCTTCGTTTTGTCCAT
CTGGTAATCATAATGAAGTGTGTGTAATGTAACTAAGAGTTTTTAGGGGA
TAAATTTCTATTTTTAATTTTTTAAGTCTAATGTTAGCATTTATTGTCAT
TAGGGTAACAATTTAAAAAAACAACATGAGTGCCGTTATTGGCTACGTAC
GTGGAATCATCAATATTTTTTTCATGTTTTTCTCTGCTTTCTTTGGCTTG
GTTTTTATCATGTTTCCAAGCTTGATATTGTTGGCTTTTAAGAAGTATGA
CTGGTTTCGAATGTGGAATGATTACTGGGGAGGCTTTTGGCTAACCTTCC
CTGGTGTGAGTATATTGACTTATTTTTTCTATGTACTGAATTGTATGTCT
TTATAAGGGATTTACATAAGACATTGTGACAAAAAAAGATTTACTTCTCT
ATATATAATTGACATTACATCATTATGATTACCTGTGGAATTTCTTGACC
CCTTTAAAATACTCTTTGTGACATGAAGCTTCGTTTGAATATCAATCTTG
CTAGTGTTTTACGGTGATTTTTATTGTTTTCTTTATGATTAAATAAAGTT
GAATGATATTTAATTTTTAGTGAAATCTGGTAAAAGTATCTAAACAAGAA
TTTTTTTCTTTTTAGGCACTCTTTGGTAAGTATCATCGACTGAGTGAAAG
ATTCCATCATTTGTTATGTTTTCCTCTGTTTAAGATATGTTTTTTTCCAG
TTTTTTAAGGCTACTTAAATTAAATTAAAGCTAAACGTTGTGGTATTTAT
AAGCACATTGGTATTTATAAATTTGACCAAATCAAACGCTATTCGATTAG
ACCAAATTCTTAGTGTTGGTATCTGATGGCCTTTGGCCTGGTAATTTTAG
AATTGGTGCATGGAGTGAAGTTTGTGATGAAAGGAGATAAATTGGATGAA
AGAGACAATGTGCTTATTATATTGAATCACAGATGTCGTGTTGACTGGAT
GTTTTATTGGATGGCAGTTCTGCGCACTGGACGTTTGCACAACGAGAAAA
TTATCATGAAGAATGAGTTGAAACATATCCCTGGACCAGGTTTCACTTTT
ACTTAATGTGTTTAAATTTTGCAAGAGTAGTAAACATTATAAACATATAG
CAGTGATTTGTAGATTTTTTTGTATTCCGTTTTCTTTTCTATTTTTATTT
CTATTTAATTTTCGCTAAAATCACTAATAGATCTTTTTAAAGAGTTGAGC
AACAGGGGGGGGGCACATGATGTGTAGTAAGTGCCTTTTCAGCACTTTTT
TTAGGACCACCACCCATTGCAATTACTACACCAGGGTAGTAACTTTATTT
CTGGGAAAAAAATTCAGGTACCACCCCCATTTTGGGTGCAAATATCAAGT
ACACCACTTCTATGCAACTTTGTGACATTTTGAAGAAACATTTGTATATA
TGCTGTGGAAAGTAACCCATACATGAGGAAAACTCCCAAGTTGACTGTAG
TTATTTTTAAAAGTTTTAAGAGGCCTTGTTGAAATATTTAGCAAAAGTGA
TTTTTAAATAATACTTTTCATCTCTTCATCAAAATATGAATTAATCTGAA
TTAATCATAAACTAAAGTCTGTCTCAAAATAATTTGCAGCTGATACAAAA
ATGGCTGTAACTTTTGACAGAATTCGAATTAGATAGCGGTTTTGTGCTTG
TGCTTGTTGAAAAGATAATCCAGAGTGGAATATCATCAAAAAAGAAAAAA
ATATTTAAAAATGGAAAAACGAAGAAAATCAACTTTTTGTAGAATAATGG
TATCTTTTTTTTTTCATATCAGAATTTCTTCAATCTTAGAACGTCAAAAA
TGCGAGAAAAAAATCAAAAAATATTCATTCAGTCAAAAAATACAGCTTAA
AACTTTGCCCTGATTGACTTAAAAAAGGCTTTTTGAAGTCAATCAGTGAT
AAACTTTGAACTATATCTTTCGATGCAATAAATTTCTTTGTTGAAGAAGT
TGATTTTCTTCTTCATTTTGAATCTTCATTTTTCGATCCTATTTGTCTTT
TCAACAAGCACAAAACCGCTAACTAATTCGAATTTTATCAAAAGTTATAG
CATTTTTTTGTCTCCTCTACAAATTATTTTGAGACAGACTTTACACAATG
AAACCTAATAAAACATCTATTTAAACTTCTTAAAAAAACAAAGAAATTTT
GTAACAAGCTTGCACCCATTAGTTCTTAATTGCCCATTGAAATGTGCCAA
GAGTCTTGATATTTTCCATAATAGAAGGTTATCAGTTGTGGAATTAAAAT
TGAAATCAATCAAAATTCCCCAAATGAACCACAAGGGATTATGTGGCAGA
AAACATATACATGCTTGCTAGCAGTCCTATTGGCATTAGTCCTTGTGATT
TTCAGACTTCCAAAACTTCAAATGACTGAAAATGGGTGAACCTTAAGCCA
CCCAGGTGGTGGGTGCACCAGAGAGCTCTGACAAGTGGTTTATAATTGAT
TAAACCATCTCAAATATGATTTAATTAAATGTCTTCTCGAAAAAGTTTAA
GAGCAAAACTCAATCTTTAATGTCGAGTGGATTTGGCTTCTGTTTTATCA
CCCAAACTCTCCGAATCCAATAAAAACAACATTTGCCCTGGTAAATTGGG
GAAAGACACCACCCTAAACAGCAATTACTACACTGTGTAGTAACTGCTTT
CAAAATTTTTGAAAACAGTACAACCACGGTAGTAAGTGTCATACTGTCTT
AAAATAACTGCGTGCCCCCCTGGCGACAAATTAGTTTTCGATTTTGACAT
GCAGAATGATTTGTTTGTGGTCTTTTCGAAGGCTGGAGAAATTGTTCAGC
TATGGAGCTCCTTTGAAAACTTTTCAATTTATCAAATTTCTCTTGAATCG
TGTAAACCCATGATCTAAAACTTTCTCTTTATGTTTTTCAGGCTGGTGTA
TGCAGTATTTGCTGTACTGCTTCTTACAGCGTAAATGGGAGACCGACCGT
GGCTACCTAGAGAGATACGTCAATTACTTCATTGATGCCAAATACCCCTT
ACAATTCTTTCTTTTCCCTGAGGGAACTGATTTCGACAAAAATGGAAAAG
CAAGCAGTGATCGATTCGCTGATAAAATGGGTCTCCCCAAATATGATTAC
GTCATGCACCCTCGTACCACTGGATTCAATTATTTGGTACAAAAAACACG
TGGCAAAGTCATCAATACTGTTTATGACGTCACTTTAGGATATCCAGTCA
ATCTTTGTTATGGTGAGATGGACTTAGCAAGAGGTAACTTTCCAAAAGAG
ATCCATTGTTTTTTCAAGAGGTATCAAGTAGACGAGCTGCCAACCGAGGA
TGGTGCATTAGGTGATTGGTGTAAGGAGAGGTTTGCTGAAAAGGAGGAAC
GGTTGAAGGAGTTTTATAAACAAAAGAGGTTCACAGGTCCTGGTACAGAA
CAGGATGTCACCACAAGGAAACAAGAAGATCATGCTAATATCACCAATTA
TATCAGTTTGATATTCTGGGTGTCGTTTGTGTTGTATTCTATCCAAGCAG
TTTGGTGTTCATCTTTCTTGTTCTGGTACACCATCATCGTTTCCATCATC
CATGCTGTTATTTCTGCTGTAGGAGGTATGGATAAAACTTTCTTAGATTT
GCACGAGAAAGAAAAATCCAAACAAAGATGATAGGCTTTTAGAGCTTTAA
TTTTGTTAATGTGTACTTTTTTTTAATTTCATGCATTTGTTGTAAAGGTA
AGCGTCATTTTTTATTTCGTTAATTTAAAATTTTTTCATTTTATATAGTC
ACACAAAGAAGATTTTTTTTTTAATTTGATTATATACGGACGATTTAAAG
ATTTTTGTGGAACATTTTTTGATTCGATTTGGAAGTAAGATTATATATTA
TCACATTATTTATTTGATATATGCATAAAGGAAATCAAAATGTTGAGTCC
TACAATCTGTATATAGATAGGAAAAGTTTTTGTCTACATTAGTCTAGTTT
TCATTTTTTAATTTTTTGTTGATTTTATCACATTTTCATTTGCTTATGAG
GGGTCTTTAAGTTTTTTTTATTGTTTCATTTATAAAATGATACAGATCGA
AAA Coding sequence (CDS) from alignment at sc0000077_pilon:221351..225553- >MSTRG.10853.2.p1 ID=MSTRG.10853.2.p1|Name=MSTRG.10853.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1908bp|location=Sequence derived from alignment at sc0000077_pilon:221351..225553- (Clytia hemisphaerica_ch_hm2_pilon)
GCTGGTGTATGCAGTATTTGCTGTACTGCTTCTTACAGCGTAAATGGGAG
ACCGACCGTGGCTACCTAGAGAGATACGTCAATTACTTCATTGATGCCAA
ATACCCCTTACAATTCTTTCTTTTCCCTGAGGGAACTGATTTCGACAAAA
ATGGAAAAGCAAGCAGTGATCGATTCGCTGATAAAATGGGTCTCCCCAAA
TATGATTACGTCATGCACCCTCGTACCACTGGATTCAATTATTTGGTACA
AAAAACACGTGGCAAAGTCATCAATACTGTTTATGACGTCACTTTAGGAT
ATCCAGTCAATCTTTGTTATGGTGAGATGGACTTAGCAAGAGGTAACTTT
CCAAAAGAGATCCATTGTTTTTTCAAGAGGTATCAAGTAGACGAGCTGCC
AACCGAGGATGGTGCATTAGGTGATTGGTGTAAGGAGAGGTTTGCTGAAA
AGGAGGAACGGTTGAAGGAGTTTTATAAACAAAAGAGGTTCACAGGTCCT
GGTACAGAACAGGATGTCACCACAAGGAAACAAGAAGATCATGCTAATAT
CACCAATTATATCAGTTTGATATTCTGGGTGTCGTTTGTGTTGTATTCTA
TCCAAGCAGTTTGGTGTTCATCTTTCTTGTTCTGGTACACCATCATCGTT
TCCATCATCCATGCTGTTATTTCTGCTGTAGGAGGTATGGATAAAACTTT
CTTAGATTTGCACGAGAAAGAAAAATCCAAACAAAGATGAATGGCCTTTG
GCCTGGTAATTTTAGAATTGGTGCATGGAGTGAAGTTTGTGATGAAAGGA
GATAAATTGGATGAAAGAGACAATGTGCTTATTATATTGAATCACAGATG
TCGTGTTGACTGGATGTTTTATTGGATGGCAGTTCTGCGCACTGGACGTT
TGCACAACGAGAAAATTATCATGAAGAATGAGTTGAAACATATCCCTGGA
CCAGGCTGGTGTATGCAGTATTTGCTGTACTGCTTCTTACAGCGTAAATG
GGAGACCGACCGTGGCTACCTAGAGAGATACGTCAATTACTTCATTGATG
CCAAATACCCCTTACAATTCTTTCTTTTCCCTGAGGGAACTGATTTCGAC
AAAAATGGAAAAGCAAGCAGTGATCGATTCGCTGATAAAATGGGTCTCCC
CAAATATGATTACGTCATGCACCCTCGTACCACTGGATTCAATTATTTGG
TACAAAAAACACGTGGCAAAGTCATCAATACTGTTTATGACGTCACTTTA
GGATATCCAGTCAATCTTTGTTATGGTGAGATGGACTTAGCAAGAGGTAA
CTTTCCAAAAGAGATCCATTGTTTTTTCAAGAGGTATCAAGTAGACGAGC
TGCCAACCGAGGATGGTGCATTAGGTGATTGGTGTAAGGAGAGGTTTGCT
GAAAAGGAGGAACGGTTGAAGGAGTTTTATAAACAAAAGAGGTTCACAGG
TCCTGGTACAGAACAGGATGTCACCACAAGGAAACAAGAAGATCATGCTA
ATATCACCAATTATATCAGTTTGATATTCTGGGTGTCGTTTGTGTTGTAT
TCTATCCAAGCAGTTTGGTGTTCATCTTTCTTGTTCTGGTACACCATCAT
CGTTTCCATCATCCATGCTGTTATTTCTGCTGTAGGAGGTATGGATAAAA
CTTTCTTAGATTTGCACGAGAAAGAAAAATCCAAACAAAGATGAATGGCC
TTTGGCCTGGTAATTTTAGAATTGGTGCATGGAGTGAAGTTTGTGATGAA
AGGAGATAAATTGGATGAAAGAGACAATGTGCTTATTATATTGAATCACA
GATGTCGTGTTGACTGGATGTTTTATTGGATGGCAGTTCTGCGCACTGGA
CGTTTGCACAACGAGAAAATTATCATGAAGAATGAGTTGAAACATATCCC
TGGACCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000077_pilon | genome | sc0000077_pilon:221351..225553 - |
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