MSTRG.10829.7.p1 (mRNA) -

Overview
NameMSTRG.10829.7.p1
Unique NameMSTRG.10829.7.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000076_pilon:1411687..1418250-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10829.7.p1 ID=MSTRG.10829.7.p1|Name=MSTRG.10829.7.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6564bp|location=Sequence derived from alignment at sc0000076_pilon:1411687..1418250- (Clytia hemisphaerica_ch_hm2_pilon)
AAATTGTTTTTTAGAAGAAGAAATGGAAGACGAAGAAGAAGATGAAGTCG
AGGATGAAGAAATGGACGAAAATGGTGAGCGATTGATGTTTCTTAAAAAG
TCCCTTTGTTCTTCCTGTTTCTCTTGTTTCACCTGGTTCTCTGAAACACT
GTCTCAGTTATTACAGTTGTCCGTTTAACTTCAGACGTTTTTGAAATACA
GTAAACAGACTTGTGTAACTTAAATAATTAAGGGAGGTGAGGATAATCTT
TTGTCAAGTAACTGTAAAAGAAATGTAGTAATTAGCTAAAATGAGAAATT
TTACAAAAAAATGTGCAATTTAAAGTCGACTTAATGTCGCTTAATTTTAC
AATTTGCAGCATTTCATGATATTTACAAAAACTTTACCAACCAAATTCAA
AAGCTATCAATACCTATGAAATACCTGTTTTTACAACCATTTTATTTTGG
CAATATACTAGGGGGTGTACCACAAGAAAGTTTCTCTTTCAAGTAAATTT
TCTTGAGTTCAGTGTATTTTAAAGAAATACATCTTTTTAAATTGAAAATT
CTTAAAAATTCTTTAAAGTGGGTTAACCTTTCACACGATTTTGAGCTTGT
GCATAAAAATTAATCACATAGATCATTAACCTAACCTGAAAGAGGTGTTA
TCATTCAGATTAAGCTCCCCTTTTTATAACCAAAGCTCAACTTGGCTGCC
TTTCTGCTTGATACTCAACAATTACCTTCCCTTAATTGCTGAGTATCAAG
CAGAGAGTAATAAGGGTAATAAGGGAAGTTATCCAGGGATAACTTACTTG
CTATTAATTTTTTCCTCAATTTGGCCCTCTTTATAGATGAAGACGGAAAA
GAACCTGAGGAGAAGGTATTATAATTTGAATAGTTTTCTTGTATAAAAAT
TTCTTTTCAGAATACTCTATATTTTAATTAAGGAAAATCTCGGAACTCGT
AAAATATTTCTCATATTGCACTCTTTCAGAACTTTCAAAATATCCTTAAG
AGACCAGATTTGATTACTGAAAAATAAAGATTTTTAACAATGAAGTGAAT
ACAATCGCTCTCATGTTGTCTTCTGACCAGCCACCATGATTAATATCTGT
GGTCGCATGCCCAAACCTTCCGTTAGTGTAGTAGTTGGTGGATTCCAACA
CACTAGCAATGTGGAGATAATTTCTCCCAATTCACTGTCTCTGACCAGTC
AGTAGACAAGAATTCACTTCCTGTTCTACCACGTGGCAATTGAGTCCTCG
GGTTCCAGATGGACCCGTAGCTTAATGGTAGAGCAAATATATGCCCGCGA
ATGGCATGGTTGTGAGTTTGAGTCTCGCCGGATCCGTTGGTTTTCCAACG
GTTCTGGTGGCTGGTCAGAAGACAATACGAGAGCAACTGTATTCACTTCA
TTGTAATACATAAGGGCAATATTCATGATTAAAGATTTTTAACTATAACT
GTCCCAAAAGAGTTTTTATGCGAATCCTTCCAACAGGATAATATTAACCT
TATTTCTTTCAGGTCTACTTTCCTGGAGATCCAATAGAAGATGGTGATGA
ATTGACTTTTGACAAAAGTGCTTACCATATGTATCATGCAGTATGTTACT
TTGTTATTTGATGTTCTTTTTTGTTTGACTACGGTTGTCTTTATAGCACA
GAATTGGAAAAACTTTTTCCAAACATCCACTATTTTGAAAAGTTTGCGTG
TTTGAAAATTAGAATAAAGGCAAATTTTGTACGAAAAAATAAAATACATT
TTTAAACGTTGTGGCTGATTCCTCCTTCTTATAAAGTTAACACATCTACA
GTATTTATTTTCTTCTTTTCAGGCACAGACTGGGGCTCCATGCTTAAGCT
TTGATGTGGTACCTGATAATCTTGGCGATGTCAGAACAGAGGTTTGTTTC
CATGAATTGACTTAAGGTGTCTGCAGGTTTGTTTTATTGAAATGTTCTAA
TAAATTGTAAACCATGTACTATTTGGTGAAAGGGTTTTTTATGCCTAAAG
ATATTGTACTTAACTGCTTTCAAATGAGAAAATGACAGCTCTAGAACAAA
GCTCAAATTGTTAAATTGCTCATAGTGTCAGCCCGCCCCCCAGAAATCTG
AAGGGCACCTAGGCCAGGTTAGGGATTGGGGGCTAATATTTTGCAATTTT
TTAGGGTTGCCAGGGGGGTACCGAGTCAGTGTAAAAACTTAAAAAAAAAA
CCACCCCACCAGCTATGGGCCAGCATAGCTGGTGGGGTGGTGTATTTTTT
AAGTTAAATTGAGTTAAAAGGGTGGTCCTCTGAGAAAAATACATTAAAAA
AGTTAGTACACTGTACTAAAAAGGGTGGTGTTCTGAATTGATACACACTG
AGAAGTTAGTACATTGTACTAATTTCAGTGGTAAAAACACACAAACCCAG
AGAATTCTCAAAGTTGGTTTTGAGTGTTTTGACGTGCTAGTTTCAGCTAA
TCTCACTGTATTCGAATGACTTTGTCTGTTTCATTGTTTCAGTGTTTGTA
CAACAAGGATTCAAATATTTTAATGTTCAAATCTTTCCTTTTATATAATT
TGGTGCTTTTCTTAGCAAAATGCTTCAAAACCTTTGTATACGGGGGTAAT
TAAACTTATCTGGTCAAGAAGAAATTAGAACAATGCACTATAAGGGGTGG
TTTCTAAACTTATCTGATCCAAAAAACAGCTAGTACAGTGTACTAAAAGG
GTGGTATCAAAAATCCGGCCATGGAGAAAAGTCAGTACACTGTACTAAAA
GGGTGGTGTCAAAGCCCCGACCGTATAAGAAAGTTAGTACAGTGTACTAA
AAAGGGTGGTGGTCTCCTTTTTTGGGAAAAAATCCAAAAATCAAGTTAGT
ACCCTATGGTCCAGTACACTGACTTGGTACCCCCCCCCTGGGGTTGCCTA
TTCATACCTAGCTGTTTTGATGGAGGCTCTGGGGCTGTGTATATTTTCCA
AATTGAATATTTCAAACTATTGAATTTTTTTACCCCTGCGCCCAGCTTCG
CATCCAATTGCGATTTTCGTTTCTTTCCACGCACGTCATCTTTAGCTATA
TTTTTCAAATGTGACTGTTTTGATTTAGACAGCCGCCATTATTTTAGCAT
AATAACAAACCGCCCCAAAAATCATTAAGATTATTTAGGAATGACAAAAG
AACAAAAAGTGTCAATTCAAAAAAATTATCGGCTGAATTATCGGGTACCT
AACTCAAAGCAATTTCTCAAGGGGACTTAACTCGTTGGGTGCACCATGCT
TCAAAGGGGGTACTCAAAAAGTGGGGTGAAGCCATGTCATGTTACTGTTA
TACCTAAAATTAAAGATGGATGTATTGTTTATATTCAGTTTCCAATGACG
TGTTACATGGTTTGTGGGACACAGAGTGAAGGGAAGCCAAACCAGTTGTT
GTTAATGAAAATGTCAAATTTAACCAAAATAATAAGCGAAGACAGTAAGT
ATGCATCTTTTGTTTTTGTTTTTTTGTTGTTGTTCACTTTTTCGTATTTT
GGACAATAAAATCATATTTCCCGTCAAAACTATATATGGCTAAGATCAGA
GATCTGACCTCAAAGAGAACAATTGTTGAAAATATTAAATAAAATGAAAA
TGAAACATAAAAAGAGACTAATAATTCTATAATCATACCGTTTTTGGACT
TACCTTGGATGTCCTTTAAATTAACCTTCGTTTGTTCTTTCGTTCGTTCC
GTCCGTTACCAGCTTTTCTCGGGATTGGCTCATTAGTTTTTTTACATAGT
GATGCAAAACGACAGTACCCAAATAGTAAAGGAGCCCGATTTTCGAAAAA
CAATTTTTCTGGCCGAAAATGCCGGAATTATGCCGGAAAAACCGATATTT
TGGAATTTTTTCGAGATTTCATCATTAGTTTTTTCTGATTTTTCGCACAG
AGATGTGTATTAGCAATGCCCAAAGCATAGTCGAGTCTGATTTTTGAGAA
AACTTTTTTTCCGGCCGAAAATACCGGAAATATGCCGGAGATCGCCGTTT
TTGGAGATTTTAATTGAACTTTTTCCTTATACTTCTTTTTTTTTCGCACA
AAAACATTATTGATATTAACAATACCCACCATCAAGCATGATTCAATTGT
CAATAAAACTGATTTTTGCAACCAGAACTTTCTATTTTTATTTCCCTACT
CCCCTTCCCTCTCCCTCATCAACAATCAATGATGAAATTTAATGTGTTAT
GCATTTTTGCTAAACGCTATATCTTCTGATTGATTGATTGTTTTCATTTT
TCTCCTTATTGCTATCTAACTTTTATCATCAGGTAGGTCCATTCAGCATG
TAGCTTGTTTTTTCTGAATTTTGATCAAGGAAAAGTTTTTCTGGCCGAAA
ATGACGGAAATATGCCGGAAATAGTTTTATATCTTGTTTTTCCAAACAAA
AACATTATTTATGACCATTAAGCATGGTTGAATTTTCAATGAAACTGATT
TTGGTCGCCGGAACTTTCTAAAAATCGCCAGAACAGACGAGAATCGCCGG
AAAAACGGTTTTTCTTGAATTTCTCGAGTTGTTTTTGTATTTTTCTGCAT
TTTCATACTATTGCTGCTATTCTTTTAAATTGATATTTTTTTTTTGAATT
TTTCTAAATATACAAACCAACCCAACCAAACATTCTGTCAAGAAATGAGA
ATTTTATACCAAAAAAGAGAGAACCGACAAACCAATAGATATAAAGTTTA
AAAAGCTCAGCAGAATTTATATAAAGTCATCAAAATAATCTAATAACAGT
TGATTTTTTTGTTCATCATATAAAGTTATCATATTTTCCTTTAAACTAAA
GATACAAATCGAAATGATTAGCTATGTGTGAAATTTAAGGACAAAATAAT
TTCAATTTCAGGTGATTCAGAGGATAGTTATATAGACGAAGACGAGAATG
AAGGTGATGGACCCCATCTTCGAACTGTCTCCATTAATCATATTGGTGGT
GTCAACAGAATTAGGGTAAAACGATGTTGCACTTCTGTAATGTCTTTCGA
ATTTTCTTGGACAAAGCATTTAGACCATTTCCTTTCAGATCAAGTTAAAA
AACAAGGATACTAGCTCTTCTTTTTGGACCTACCTCCGGGTACCCCGGTG
GAGGTTCTATAAATTAACCCATGTCCGTCCGTCCGTCCGTCCGTCCGTTC
GTTCGTCTGTCCGTCCGTCCGTCTGTTACCAGCTTTTCTCAGGATTGGCT
CATTAGTTTTTTCTGATTTTTTGCACAATGATGCAAAATGGCAATGCCCA
GAACGTGACGGAGCCCGATTTTTGAGAAAAAATTTATTTGGGCAAATTTG
GGCCAAAAACTACCTAAAAATAGGGTTTTTTGGACTTTGTGCAAAATCCT
GTCATTACTTTTTTCTGATTTTTTGTTCAAAGATGGAGGGCAAGATTCTC
TAAAGAATGGCTGAAGTGGTTTTTCCCGGAAAATTCTTATTCGCCTTAAA
AAACGGATTTTCGTATTTTTGGGGAAATTCCCATTAACCAAATAAGCAAA
TATAGCTTTTCTCAATGTTGACTCGTTATTTTTTTCTGATTTTTTGCACA
ATGATGCAAAATAGCAATGCCTAAAATGTGTCAGAGCCCGACTTTCGAAA
AAAAATATATTTGGGCAAATTTGGGCCAAAAACTGCCTAAAAATAGGGTT
TTTTGGACTTTGTGCAAAATCCTGTCATTACTTTTTTCTGATTTTTTGTA
CAAAGATGGAGGGCAAGATTCTCTAAAGAATGGCTGAAGTGGTTTTTCCC
GGAAAATTGTTATTCGCCTTAAAAAACGGATTTTCGTATTTTGGGGAAAT
TCTCTTTAACCAAATAAGCAAATATAGCTTTTCTCAATGTTGACTCGTTA
TTTTTTTCTGATTTTTTGCACAATGATGCAAAATGGCAATGCCTAAAATG
TGTCGGAGCCTGATTTTCGAAAAAAAATATGTTTGGGCAAATTTGGGCCA
AAAACTGCCTAAAAATAGGGTTTTTGGACTTTATGCAAAATCCTGTCATT
ACTTTTTTCTGATTTTTTGTACAAAGATGGAGGGCAAGATTCTCTAAAGA
ATGGCTGAAGTGGTTTTTCCTGGAAAATTCTCATTCGCCTTAAAAAACGG
ATTTTCGTATTTTGGGGAAATTCCCTTTAACCAAATAAGAAAGTATAGCT
TTTCTCAATGTTGACTCATAATTTTTTTCTGATTTTTGCACAATGATGCA
AAATGGCAATCAATGCCCATGACCATTTTACAATATTCAACACACAAGCT
TTATTTTTCCATTCTGAATTTTTGTACAATTATTGTCACTTTTTTCTTAT
TTTCATCTGATGCTAATCATTAGGTAGGTCCATTCAGCATGTTGCTTGTT
CTTTTTTGTTATGATTCAACTCGTATTGATTTCTTCTATCTCTAGCAAAC
TACAATCAATAATAAACAGTTTTGCGCAACTTGGTCAGAAACAGGAACAG
TGTATGTTTGGGACAACACTAAAGGAATGGAAAGCCTTGACTTGCCAGGA
GTAGCGCAACATCAAACTGCGCCAAACTCAGCAAAGCACACATTTCATTT
CTCTGGTCATCAGG

Coding sequence (CDS) from alignment at sc0000076_pilon:1411687..1418250-

>MSTRG.10829.7.p1 ID=MSTRG.10829.7.p1|Name=MSTRG.10829.7.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1116bp|location=Sequence derived from alignment at sc0000076_pilon:1411687..1418250- (Clytia hemisphaerica_ch_hm2_pilon)
CAAACTACAATCAATAATAAACAGTTTTGCGCAACTTGGTCAGAAACAGG
AACAGTGTATGTTTGGGACAACACTAAAGGAATGGAAAGCCTTGACTTGC
CAGGAGTAGCGCAACATCAAACTGCGCCAAACTCAGCAAAGCACACATTT
CATTTCTCTGGTCATCAGGTGATTCAGAGGATAGTTATATAGACGAAGAC
GAGAATGAAGGTGATGGACCCCATCTTCGAACTGTCTCCATTAATCATAT
TGGTGGTGTCAACAGAATTAGGATGACGTGTTACATGGTTTGTGGGACAC
AGAGTGAAGGGAAGCCAAACCAGTTGTTGTTAATGAAAATGTCAAATTTA
ACCAAAATAATAAGCGAAGACACAAACTACAATCAATAATAAACAGTTTT
GCGCAACTTGGTCAGAAACAGGAACAGTGTATGTTTGGGACAACACTAAA
GGAATGGAAAGCCTTGACTTGCCAGGAGTAGCGCAACATCAAACTGCGCC
AAACTCAGCAAAGCACACATTTCATTTCTCTGGTCATCAGGTGATTCAGA
GGATAGTTATATAGACGAAGACGAGAATGAAGGTGATGGACCCCATCTTC
GAACTGTCTCCATTAATCATATTGGTGGTGTCAACAGAATTAGGATGACG
TGTTACATGGTTTGTGGGACACAGAGTGAAGGGAAGCCAAACCAGTTGTT
GTTAATGAAAATGTCAAATTTAACCAAAATAATAAGCGAAGACACAAACT
ACAATCAATAATAAACAGTTTTGCGCAACTTGGTCAGAAACAGGAACAGT
GTATGTTTGGGACAACACTAAAGGAATGGAAAGCCTTGACTTGCCAGGAG
TAGCGCAACATCAAACTGCGCCAAACTCAGCAAAGCACACATTTCATTTC
TCTGGTCATCAGGTGATTCAGAGGATAGTTATATAGACGAAGACGAGAAT
GAAGGTGATGGACCCCATCTTCGAACTGTCTCCATTAATCATATTGGTGG
TGTCAACAGAATTAGGATGACGTGTTACATGGTTTGTGGGACACAGAGTG
AAGGGAAGCCAAACCAGTTGTTGTTAATGAAAATGTCAAATTTAACCAAA
ATAATAAGCGAAGACA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10829MSTRG.10829Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10829.7.p1MSTRG.10829.7.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10829.7.p1.exon7MSTRG.10829.7.p1.exon7Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10829.7.p1.exon6MSTRG.10829.7.p1.exon6Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10829.7.p1.exon5MSTRG.10829.7.p1.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10829.7.p1.exon4MSTRG.10829.7.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10829.7.p1.exon3MSTRG.10829.7.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10829.7.p1.exon2MSTRG.10829.7.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10829.7.p1.exon1MSTRG.10829.7.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000076_pilongenomesc0000076_pilon:1411687..1418250 -