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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000076_pilon:1241702..1245203+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10821.5.p1 ID=MSTRG.10821.5.p1|Name=MSTRG.10821.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3502bp|location=Sequence derived from alignment at sc0000076_pilon:1241702..1245203+ (Clytia hemisphaerica_ch_hm2_pilon)
AAtaaatttcagttttgtttgttttcacctTTGGTATTTGTGATACagaa
tttgaaagaattctGTTGAAAATGTGAACAGGAATGGGATGTGCTTCAAG
TAACTATCAGAAACAAAATATTCAAGTGACACCTTTggctaaaaagaaga
aacaagatGTGATCCCAAACCAGTCTCCTTATTTACCTAGAAATGCAGTG
GAACCTTTGAAAAGGGTTTTCAATCCTGATGCAGGTTTGTTGGTTACAAT
TTTGAAATCTTATCTTGAAAGttcaaacaatttcaaaagGGTTTGTCTTA
TTGCATACGAGTGAAGCACTTTGATACTCTTTTCTTTAGCTGAATTCATG
AGCTGAGAGATCTGTTTATTTTACGTCAGAAGGATTGTTTCAACTTTCAG
CCTTTGCATCATCAATCATCATTCAAAAATGGTACCGAAGATACAAAGCC
AGACTTGAATTGAAAAGACATTGTGCTTGGAAGGTCTTCCAAGAAATCGA
ATATTCTGCTGAACATGACCAAATTAACgtatgcaaagttttttttgtaa
tttctctCCCAATGAATCCATAAATCGATTATGCGAATGAATTTGTGCAT
AGTTTTCTCATTTATCGTGAACGACATGAAAAATACTAGTAATCAGATTG
GCTGAtcgcgtacataaatgctgtatttcgtATTGTACCGTACAAGACCG
TTCAAAGAAGGGGCTTGGTAAGCGAGAGACCATATTTTGTACTTTCTTGT
TGTATCTTATACCCAAATTTATTCTcagaaatgttttcttttttctctca
aagCACAAAAAGGTTGTCAAATAagaatgtttttaattgtttaatGACAA
CTCGAATCATTTAGAATGTTTTGATATTGATACCGAAATACAggagtgaa
aaaacaaaaattagggAACAAAACACAATCTGTGACTAAATATTGTGGCA
AGAATTCCCTTCCCTCACCCCTAGTATCAATGTTTATGGGTAGAAAGGCT
GCTACCATGCTCAGAAAAAGCTCACATTAACACTGATATTAGGGGGGAAg
gggtttttcaaaaaattgccaCATATTTTGTCATTGATTGTAGAGAGaga
aagtttgttgatattgGCGATAAACCAGTTTATCACACTTTTACTTGTAC
AATATTggatatatatttttctcgttcaaagttttctatattttgtaTGA
CgaaaaatttgagctcaaaaaaTATATCCAACATTGTATTCGGTACCGTG
CGATAACTATTATGAAGACGAATGAATGGTCTAAAACCATTCCAGGAGAA
GCTTTGAATTATTTCGTTatcctttttttttcagctttacAACTTTTTCA
ATGAGATGGTATCAAATGTCGaaaaaaaCGGCAGTAAgattctttaattt
tctttcaggGATCTTATTTTCTGTTTCTTCAAAAATACCACTTAGATGAA
CCTTTGTTATTGTAACACTCCAGTGTTTGGGAAATGTGTTCTTCTTCTAG
TACTCTTATAAGTCTTCATTGCTCATTCTTTTTAAATTATGGAAAGGAAA
TAAACTTTTGGACTCTTTTTGCTTTTAGACCACTCGAATAAAGGATTTGT
CAATATGTTGACCAAAGCTCAAACCAGCAACAATCTATTGGAAACTGAAT
CCATGGCTGAAGTTTCAAACATGGTGGTGGATAGCTCTTATAAAGGACCG
CACGTCGAGCTACCAATAACACtggagaaaacaaaagaattgctgGAATA
TTTCAAAGGAAAGAAAAGACAGGtagaagtttgtttatttatgaATTCAT
AtcattctaaatattttgttcttattttattaTCCGGTTTTTAGTAGTTG
AGTTATCCACGGAAGAGTTAGCCTCGGAAGAGTTAGCCTAACCatttctt
ttaAGAACTAATTTACATATAACAAGAATTCTTAGGACATTTAGCCTTTA
GTACTTACTAAATGATCCAAATATTATTAGTTAATTATATATTTAGATTA
CATTCCTGTCTCTGAGAAATCCTTTACCAGGATAACTAAAATATGCTTTG
CACTTTCTTCAGATATTACATCCGAAATACGTGAAAATGATTCTATTGGA
AGcgttttcgcgaatgaaaatcCTTCCCAACGTCATAGAGATTAATTTGA
ATATTTGTAAACAAGTCACTGTGGTTGGTGATATTCATGGAAAGTTCAAC
GATTTCATCACAATATTTAACAAGGTAATTAATTCCAAATTTTTCACCGC
ATGGGCTTCTGATCAAGGGTTAATGACCATCAACCGGACGTAAGTCTATT
GTAAGGGTTAACGAAAGAAAAACTTTGGGATATGCGAAATTTTAGGATAT
GCATTATAATTGttgtttttggtcaaaaatgttcttgcatttttgggcca
aattagGGCCGAATATACATAACAAAACAGGCTTTCCCAGCTGCCTGCAG
TTATAGGTTAaaccttctttattttttcatcgtACATAGTagatttctac
ttttttcaccAGCTTTCACTGGAAGCTGCTCAATATGCTTTGCTTatcca
aggacacttgtatagcgtagctggactgagcacaaatttattttctttga
accatGTGTGTCGTCGTAATAATAGACATTGTATTTCTTTGACCAATAAG
AGGTCGTTCCTCATGTTtttccaaccaatcagaaatactttttaataaaa
gtacttttcaatgaaaaaccaTCGTCAGACAGATGGATTTTGCACGGAAA
GTTTGTTGCTAaagatattttatgaaattgctTTGACATGATTACAATAA
CAATCAAAAAATTACTTTATGATGAGTTTTATCACACCTTTATAcaatca
aatcattaaaaaagagaaaattttctttctcgtGAATGATGTTTAGATTT
TGCTTTTAGCAGCTTGTAGTATAAAATTCCGTTCTTGTTCGACATCTTGC
TATAGCCTTAAGATTGGGACTTTGGTGAAAGTTTTAGGCGAGTTTAGGct
atttttactcatttttttctcgTCATTTTCAACTTCACCTTCTAAgagtt
gtttaaaatatttgttacacCTTGAAATACTTACGTAATTTACACTTTAA
CTATTTCGaaggttttttttcaattgtttttaattattgatcaaacttat
attttattttaaaattcaagataaagtcaaaaatttgcaaacAAAGTCCC
TcattgaaaaataaacttttgcaACACCAATTATTtcattaatttgaaat
attctcaacGCTGCCGGTTCGCGGATTCGCTCCGACAGGCATGTGTTGAA
AACTCGTTTGTCCTAGTCCAGcttcgctatacaagtgtccttggctTATC
TAACATTAATTCATCATCGATGTTTCGCCTACAGAATGGGTTGCCATCTC
CTGAAAATCCATATATTTTCAACGGTGATTTGTAGATCGTGGTAAAAATA
TAGAGATTTCCTGCTGTTGTGTTGCTTCATGTTTTGTCCCCGATTCACGT
GG Coding sequence (CDS) from alignment at sc0000076_pilon:1241702..1245203+ >MSTRG.10821.5.p1 ID=MSTRG.10821.5.p1|Name=MSTRG.10821.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4536bp|location=Sequence derived from alignment at sc0000076_pilon:1241702..1245203+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGATGTGCTTCAAGTAACTATCAGAAACAAAATATTCAAGTGACACC
TTTggctaaaaagaagaaacaagatGTGATCCCAAACCAGTCTCCTTATT
TACCTAGAAATGCAGTGGAACCTTTGAAAAGGGTTTTCAATCCTGATGCA
GAAGGATTGTTTCAACTTTCAGCCTTTGCATCATCAATCATCATTCAAAA
ATGGTACCGAAGATACAAAGCCAGACTTGAATTGAAAAGACATTGTGCTT
GGAAGGTCTTCCAAGAAATCGAATATTCTGCTGAACATGACCAAATTAAC
ctttacAACTTTTTCAATGAGATGGTATCAAATGTCGaaaaaaaCGGCAA
CCACTCGAATAAAGGATTTGTCAATATGTTGACCAAAGCTCAAACCAGCA
ACAATCTATTGGAAACTGAATCCATGGCTGAAGTTTCAAACATGGTGGTG
GATAGCTCTTATAAAGGACCGCACGTCGAGCTACCAATAACACtggagaa
aacaaaagaattgctgGAATATTTCAAAGGAAAGAAAAGACAGATATTAC
ATCCGAAATACGTGAAAATGATTCTATTGGAAGcgttttcgcgaatgaaa
atcCTTCCCAACGTCATAGAGATTAATTTGAATATTTGTAAACAAGTCAC
TGTGGTTGGTGATATTCATGGAAAGTTCAACGATTTCATCACAATATTTA
ACAAGAATGGGTTGCCATCTCCTGAAAATCCATATATTTTCAACGGTGAT
TTGTAGATGGGATGTGCTTCAAGTAACTATCAGAAACAAAATATTCAAGT
GACACCTTTggctaaaaagaagaaacaagatGTGATCCCAAACCAGTCTC
CTTATTTACCTAGAAATGCAGTGGAACCTTTGAAAAGGGTTTTCAATCCT
GATGCAGAAGGATTGTTTCAACTTTCAGCCTTTGCATCATCAATCATCAT
TCAAAAATGGTACCGAAGATACAAAGCCAGACTTGAATTGAAAAGACATT
GTGCTTGGAAGGTCTTCCAAGAAATCGAATATTCTGCTGAACATGACCAA
ATTAACctttacAACTTTTTCAATGAGATGGTATCAAATGTCGaaaaaaa
CGGCAACCACTCGAATAAAGGATTTGTCAATATGTTGACCAAAGCTCAAA
CCAGCAACAATCTATTGGAAACTGAATCCATGGCTGAAGTTTCAAACATG
GTGGTGGATAGCTCTTATAAAGGACCGCACGTCGAGCTACCAATAACACt
ggagaaaacaaaagaattgctgGAATATTTCAAAGGAAAGAAAAGACAGA
TATTACATCCGAAATACGTGAAAATGATTCTATTGGAAGcgttttcgcga
atgaaaatcCTTCCCAACGTCATAGAGATTAATTTGAATATTTGTAAACA
AGTCACTGTGGTTGGTGATATTCATGGAAAGTTCAACGATTTCATCACAA
TATTTAACAAGAATGGGTTGCCATCTCCTGAAAATCCATATATTTTCAAC
GGTGATTTGTAGATGGGATGTGCTTCAAGTAACTATCAGAAACAAAATAT
TCAAGTGACACCTTTggctaaaaagaagaaacaagatGTGATCCCAAACC
AGTCTCCTTATTTACCTAGAAATGCAGTGGAACCTTTGAAAAGGGTTTTC
AATCCTGATGCAGAAGGATTGTTTCAACTTTCAGCCTTTGCATCATCAAT
CATCATTCAAAAATGGTACCGAAGATACAAAGCCAGACTTGAATTGAAAA
GACATTGTGCTTGGAAGGTCTTCCAAGAAATCGAATATTCTGCTGAACAT
GACCAAATTAACctttacAACTTTTTCAATGAGATGGTATCAAATGTCGa
aaaaaaCGGCAACCACTCGAATAAAGGATTTGTCAATATGTTGACCAAAG
CTCAAACCAGCAACAATCTATTGGAAACTGAATCCATGGCTGAAGTTTCA
AACATGGTGGTGGATAGCTCTTATAAAGGACCGCACGTCGAGCTACCAAT
AACACtggagaaaacaaaagaattgctgGAATATTTCAAAGGAAAGAAAA
GACAGATATTACATCCGAAATACGTGAAAATGATTCTATTGGAAGcgttt
tcgcgaatgaaaatcCTTCCCAACGTCATAGAGATTAATTTGAATATTTG
TAAACAAGTCACTGTGGTTGGTGATATTCATGGAAAGTTCAACGATTTCA
TCACAATATTTAACAAGAATGGGTTGCCATCTCCTGAAAATCCATATATT
TTCAACGGTGATTTGTAGATGGGATGTGCTTCAAGTAACTATCAGAAACA
AAATATTCAAGTGACACCTTTggctaaaaagaagaaacaagatGTGATCC
CAAACCAGTCTCCTTATTTACCTAGAAATGCAGTGGAACCTTTGAAAAGG
GTTTTCAATCCTGATGCAGAAGGATTGTTTCAACTTTCAGCCTTTGCATC
ATCAATCATCATTCAAAAATGGTACCGAAGATACAAAGCCAGACTTGAAT
TGAAAAGACATTGTGCTTGGAAGGTCTTCCAAGAAATCGAATATTCTGCT
GAACATGACCAAATTAACctttacAACTTTTTCAATGAGATGGTATCAAA
TGTCGaaaaaaaCGGCAACCACTCGAATAAAGGATTTGTCAATATGTTGA
CCAAAGCTCAAACCAGCAACAATCTATTGGAAACTGAATCCATGGCTGAA
GTTTCAAACATGGTGGTGGATAGCTCTTATAAAGGACCGCACGTCGAGCT
ACCAATAACACtggagaaaacaaaagaattgctgGAATATTTCAAAGGAA
AGAAAAGACAGATATTACATCCGAAATACGTGAAAATGATTCTATTGGAA
GcgttttcgcgaatgaaaatcCTTCCCAACGTCATAGAGATTAATTTGAA
TATTTGTAAACAAGTCACTGTGGTTGGTGATATTCATGGAAAGTTCAACG
ATTTCATCACAATATTTAACAAGAATGGGTTGCCATCTCCTGAAAATCCA
TATATTTTCAACGGTGATTTGTAGATGGGATGTGCTTCAAGTAACTATCA
GAAACAAAATATTCAAGTGACACCTTTggctaaaaagaagaaacaagatG
TGATCCCAAACCAGTCTCCTTATTTACCTAGAAATGCAGTGGAACCTTTG
AAAAGGGTTTTCAATCCTGATGCAGAAGGATTGTTTCAACTTTCAGCCTT
TGCATCATCAATCATCATTCAAAAATGGTACCGAAGATACAAAGCCAGAC
TTGAATTGAAAAGACATTGTGCTTGGAAGGTCTTCCAAGAAATCGAATAT
TCTGCTGAACATGACCAAATTAACctttacAACTTTTTCAATGAGATGGT
ATCAAATGTCGaaaaaaaCGGCAACCACTCGAATAAAGGATTTGTCAATA
TGTTGACCAAAGCTCAAACCAGCAACAATCTATTGGAAACTGAATCCATG
GCTGAAGTTTCAAACATGGTGGTGGATAGCTCTTATAAAGGACCGCACGT
CGAGCTACCAATAACACtggagaaaacaaaagaattgctgGAATATTTCA
AAGGAAAGAAAAGACAGATATTACATCCGAAATACGTGAAAATGATTCTA
TTGGAAGcgttttcgcgaatgaaaatcCTTCCCAACGTCATAGAGATTAA
TTTGAATATTTGTAAACAAGTCACTGTGGTTGGTGATATTCATGGAAAGT
TCAACGATTTCATCACAATATTTAACAAGAATGGGTTGCCATCTCCTGAA
AATCCATATATTTTCAACGGTGATTTGTAGATGGGATGTGCTTCAAGTAA
CTATCAGAAACAAAATATTCAAGTGACACCTTTggctaaaaagaagaaac
aagatGTGATCCCAAACCAGTCTCCTTATTTACCTAGAAATGCAGTGGAA
CCTTTGAAAAGGGTTTTCAATCCTGATGCAGAAGGATTGTTTCAACTTTC
AGCCTTTGCATCATCAATCATCATTCAAAAATGGTACCGAAGATACAAAG
CCAGACTTGAATTGAAAAGACATTGTGCTTGGAAGGTCTTCCAAGAAATC
GAATATTCTGCTGAACATGACCAAATTAACctttacAACTTTTTCAATGA
GATGGTATCAAATGTCGaaaaaaaCGGCAACCACTCGAATAAAGGATTTG
TCAATATGTTGACCAAAGCTCAAACCAGCAACAATCTATTGGAAACTGAA
TCCATGGCTGAAGTTTCAAACATGGTGGTGGATAGCTCTTATAAAGGACC
GCACGTCGAGCTACCAATAACACtggagaaaacaaaagaattgctgGAAT
ATTTCAAAGGAAAGAAAAGACAGATATTACATCCGAAATACGTGAAAATG
ATTCTATTGGAAGcgttttcgcgaatgaaaatcCTTCCCAACGTCATAGA
GATTAATTTGAATATTTGTAAACAAGTCACTGTGGTTGGTGATATTCATG
GAAAGTTCAACGATTTCATCACAATATTTAACAAGAATGGGTTGCCATCT
CCTGAAAATCCATATATTTTCAACGGTGATTTGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000076_pilon | genome | sc0000076_pilon:1241702..1245203 + |
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