MSTRG.10804.1.p1 (mRNA) -

Overview
NameMSTRG.10804.1.p1
Unique NameMSTRG.10804.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000076_pilon:1045714..1048499-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10804.1.p1 ID=MSTRG.10804.1.p1|Name=MSTRG.10804.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2786bp|location=Sequence derived from alignment at sc0000076_pilon:1045714..1048499- (Clytia hemisphaerica_ch_hm2_pilon)
CCAGATTACATTGCCAAGGAACGTCAGATGTACGAGAAAGTCGAACAAGC
ATTTCTCCAGCATCAAAACAAAAGAGGAATCCCACCTGTCAATCATCACA
TGACCAATAAGAACCAATCAGATCGACACCTAATTACTGATTGCCAATCA
GAGAGCGTAATTAAACAACACGTGATCGAAGATGACCAATCAGATGACTC
AGGTCTATCAGGAGATACCGATTCATTATGTAGTTTTGTTGGTGAGAAAC
CCTTCTTATTATTTTGTTATCTTTCGATTCAGATCGACTGTATCGGTAAA
AGGAAATAAATACATTTGCAGGAAAAGGAATACTCGTCAAAAACACCCAT
AATAGACCTTATCATAAATTATGTCATGAGCAACGCTTACCTTGCTTTTA
AAATATTATGGTAATCCCCAGAAGAGTTTATAATAAGTTGAAGACTCGGG
GGGATTTAATTACCTAAGCAATGGTTTCAAAACGAGGTAGTCGTTACACT
CAAAACAATCAATGTAAAGACCTATAAGGCAATGATCCAGAAACAAGAAA
AGATCGCTGTCATTGTTTCGCTTGTTAAAAATTTATGTGTTCTACATTGA
GTTAAAAGTCCGAAGGGCTAGAGTAGAATCTAACCTTTCTCAGGCAAGAA
AAACTGAGGCAACTATCATCCCATCCAGAACGTGCCTAGAATGCGTCGCA
ATCATGACGACGAATTGTATCTAGTGGTTCTTTCGTTTTTGAGGACCTAT
TTTTTCTAGCGATAGATTTTACTTTCAATCCGGTGTTTGTGTAAAAATCA
CGCGCGGGCGTTCTGGATGGGAAATTAAGTGGCTCATTTCCCATTCAGGA
GTCTCGAGTTTATCCCTTCGGGCTTGGAAGTCAATGGTGTTCTACATCCG
TGAATAATTTTATCACTTATGCTTCTCTTTTAGACAAGGAACGAGATCTC
ATTGAACAAACAGAAGAGATGTTTCAAAAGTTCGAAGCACTCCACAAACA
GAGCACCGCTTCTTATCTTCTAAAATGAAAACGAGTTGTATCAGTAGAAG
CTCATCAACCAGCTAGCAAAGCGGATTCTACCAGGAATTCACTTATAAGT
GAAAACAGTAATTTTGTAAAGGACTCGCTTCTTGTCCGCCTGCAAATCGC
CGAGAGGAACGCCGTGAATCAAAGGAAAATTATTTTTCATGGAAAATAGA
AGGTTTGAATTTTTTTTCCATGGAGACATGTTTCTACCCATATTAGTTTT
TTTTTTTTGTATCGAAAAATGTTTGTGTATTTCCCAGAACGAAATATGCA
CCTCCATAATTGAATTTTCACCAAAATTTTCTGCTTTTTCAGGTCGTCTT
GACGACGCGCTAGACGCAGAGGAAGACTATCATGCTTTTTCATTGGAAGT
CTCGAAATTGAAAAGAAAATTCTTCAACTGGAGAAAGAATCAAGCAATGG
AAACGAGACAGCAACAAGGTACTGTATATTTTATAGATACAAGTTACTCA
CGCTTATTCGAGCTTCTATTATTCAAATATTTCTTTAATTCAAACTTGTT
TTTAGTCCCCGTCAATGAAAAACCCTGTTAAGATATTCTCTATAATTTGA
ATCTCTCTAAAATTCGCTTAAATAAATTTACCGCTCGATTTTGAATCAGT
GAAAGCCAACTATTACTTTACTCAGATTTAGCCTGAAGAAAAATTTACTG
ATTAAGTGTATTTTCAGATCAGTAAATATTTCAAAACACAATATTTAAAA
AAAATCCGCAAACTCTCTTTACACTTCATATTTTCCAAGACGTGGTAGCA
AAACGGAAACAATATCAACAACTGTCACGCGTGAATGTAAACTTGGTTAT
CAAATCAAGAAGTCTGGGAACGAGTTTGTTGATAAATCATGTTATAATGA
TGACGGTGATTGCGTGCCTGAAGGAATCATCAACCACCGGAGACAGGTAC
CAATTTGTAACTATATATTTCAGCTTTGACTTATCTCTGCCTTAAGCTCT
TGTCCTTTTTACTAATATATCCATGTGGGATCCCTGTCTCAATTCTGTTA
CATGTTTTCCCAGGAGAGACACTTACAAAAAATTGGGTACGAGGACGTGT
CGCTGGTCAGGGTCCCTTTTTAGGCTCTGAAGATATTCTGACAGGGTTCC
AAGTTTACTAACTTTCAAGATGTGTATATGACAGGGTCGACTTTTGAGAA
TTTTTTACAATTTTCAGGGCAGCATTAAAAATTGCTTTCCATTTCTCGTT
TTCTTTTAGTCTTTTGGCCACATTTCAGGGTGAAAATCGATTTATCTTTA
TGACAGGTCCCCAAATTCACCAGATATGTATTTGAAAGTTTCTATTTTTC
AAATTCCAGCGGCACGTCCCCGTCAGCTGTCAAGGTCAGTGCCCCCGGGC
ATGTTTTCTTTAAAGGAACGTCCAAAATTTATTTAAAACAGCCCTCGGAT
GTTATCAATTTTTTTGAGTTTTAAGCGTAAAAATGTTCTCAAAATCTTCT
TATTTTCACCATTTTGTGAGTATTTTTTGCAAACAATTTATTCAGGAATT
TGGTGTTTTAAAGTCTACAAAGCCTAAAGTGTTCTCAACATTTTGGCAAT
CAAAGCCTTATATAGTTTGTTCAAGTGCACACTCTTCACTTATCTAAGCT
ATGTTATACCCTTCCTCTGCCCCTGTTACACCCCTGCCTAAGTACTGAGC
TTATATTTTACTTTCTAGGTATATCAATCTTCATGAGCTTTAAGATGGTT
CGGTTTGGTCCAAAATAGTGTTTCGTCAAAAATAAA

Coding sequence (CDS) from alignment at sc0000076_pilon:1045714..1048499-

>MSTRG.10804.1.p1 ID=MSTRG.10804.1.p1|Name=MSTRG.10804.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=672bp|location=Sequence derived from alignment at sc0000076_pilon:1045714..1048499- (Clytia hemisphaerica_ch_hm2_pilon)
ACAAGGAACGAGATCTCATTGAACAAACAGAAGAGATGTTTCAAAAGTTC
GAAGCACTCCACAAACAGAGCACCGCTTCTTATCTTCTAAAATGACCAGA
TTACATTGCCAAGGAACGTCAGATGTACGAGAAAGTCGAACAAGCATTTC
TCCAGCATCAAAACAAAAGAGGAATCCCACCTGTCAATCATCACATGACC
AATAAGAACCAATCAGATCGACACCTAATTACTGATTGCCAATCAGAGAG
CGTAATTAAACAACACGTGATCGAAGATGACCAATCAGATGACTCAGGTC
TATCAGGAGATACCGATTCATTATGTAGTTTTGTTGACAAGGAACGAGAT
CTCATTGAACAAACAGAAGAGATGTTTCAAAAGTTCGAAGCACTCCACAA
ACAGAGCACCGCTTCTTATCTTCTAAAATGACCAGATTACATTGCCAAGG
AACGTCAGATGTACGAGAAAGTCGAACAAGCATTTCTCCAGCATCAAAAC
AAAAGAGGAATCCCACCTGTCAATCATCACATGACCAATAAGAACCAATC
AGATCGACACCTAATTACTGATTGCCAATCAGAGAGCGTAATTAAACAAC
ACGTGATCGAAGATGACCAATCAGATGACTCAGGTCTATCAGGAGATACC
GATTCATTATGTAGTTTTGTTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10804MSTRG.10804Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10804.1.p1MSTRG.10804.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10804.1.p1.exon5MSTRG.10804.1.p1.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10804.1.p1.exon4MSTRG.10804.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10804.1.p1.exon3MSTRG.10804.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10804.1.p1.exon2MSTRG.10804.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10804.1.p1.exon1MSTRG.10804.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000076_pilongenomesc0000076_pilon:1045714..1048499 -