MSTRG.108.1.p1 (mRNA) -

Overview
NameMSTRG.108.1.p1
Unique NameMSTRG.108.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000001_pilon:2013010..2014735-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.108.1.p1 ID=MSTRG.108.1.p1|Name=MSTRG.108.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1726bp|location=Sequence derived from alignment at sc0000001_pilon:2013010..2014735- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTTTTAGAATGACACCTTTGAAAGACCATCTTGATTTTCTTTTCTTTT
TCAAATTTATAAAATTTTGTTTCATTTTCGATGTTAAAAATTAGTTTCAC
GCTAAAATTTCAAAATTCAAAATAAGAGAAGAAGTGACATAGTCACGAAG
GAAAGAATTTTTTTTGCTCATCCGATTTTCATACGTTGAAAGTTGAGGTC
AACTGAAAATTACTTTTTTGCAACAGATATGTTTTTATTGTTTGGCTTTC
TTCTATTTCTTTGTCATCAATTTCAAGGTATAATTTTTGTTCATAATTCT
TAAGGTTTTGAAAAATTAACCAGTGTCTTTCTAAGATTGGTGAAATTTCA
CCGGCGCTAAATTTTTAAGGGGAAATTAAATTTTGACGTAGAGTAGCTTA
TTTTATTCATAGTACGACTTCAATCTTTAAAGTAATAATAAGTTGCCAAT
TTTGAACACTCCTAAAAAGTTTCATAAATATAACTATTATAGTTTTGAAG
ATATGAATATTCACGTAAAGTTTAAGAATGACTTGTTTATAGATTTGACG
TCAATCTTTCCTATTTAGGTCCAATAAGATCTACATTGGTTTTCAAAGCT
TCTAAACTTCTAATATTTCATTTAGATACTCATGGATTATCCATCAGAGG
CCCAAATGACGCACAGCAATTGATAAATTCTCATGGTGAGAATGATTTGC
CAAGTGGTGGAATGTGGGAAACTGCAAAATCACAAGCTATGGAGACATAT
CGTAAAGATTCCCGGCGGGGAATTCCCAAAAGAGGTCGATCCTCTTTCCT
GGCTATTGGAAAGAAAGACGATTCCCTGAGCCTGGGGTCGAAAATGAAGA
AATCTTTGGAATCACCCTCACTTAGTGTTTGGAGACGAGGAGATTCCCTT
CACTCAATCTTAAGGGTAAATCCTTCTCTGGGGATCTGGAAGCGAGGAGA
TTCCCTGATGAGAAGATTTGGAAGGAAGAATTTTGGAAAAGATAACTCTC
GGAGGTCACTGGTGAGGGAAATTGAAAATGACGCTTTTGGAATGAATAGG
AAAGACGAATTTCCCTCACCAGGTATGTGGGAAAAAGCAAAATCCCAATA
TTTTGGAAAGAGAGAATTTAGAAATTCCATCCTCGGAAAGCATGGGAAAG
ACGAATTCCCCTCGCCAGCCATGTGGGAGAAAGCGAAGAACCAATATTTT
GGAAAGAGGGATATTAGAAATTCCATCCTTGGAAAGCATGGGAAAGACGA
ATTCCCTTCACCAGCCATGTGGGAAAAAGCAAAGAACCAATATTTTGGCA
AAGGAAGATAAACATTACAGATATTCAACATACAATATAATTTAACTATC
CAGATTGTCCTGATTGCATTTTAAGTTGAAAAACATTGAAAATTCTTGCA
AGATATTTTACATCTAGTCAGTATCAGCTTTAACACTTTTAAAAGGGATT
AGGCTCAAGTTTATCGGGATCAAATGCCGTCAAAATAAGCGTAAGTATGA
GTGTATCAATACAATGACAAAAATTTGACGTCCATCCAACCCTGGAAAAC
TCCGACCTAGTCCCTTTCATTCAACTTTTTTGAACGAAGACAGGTGTATT
TTTATGATCTTTATGTTTTTTACTTTTCTTATATAAATTTCACCATAACT
ATTGAAGAAAGGACCGTGGCACTTAAAGGGTTAATCCTTGAAGCCTTTTT
GAGTTATCAAAAAATAAATGGTTAAC

Coding sequence (CDS) from alignment at sc0000001_pilon:2013010..2014735-

>MSTRG.108.1.p1 ID=MSTRG.108.1.p1|Name=MSTRG.108.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1470bp|location=Sequence derived from alignment at sc0000001_pilon:2013010..2014735- (Clytia hemisphaerica_ch_hm2_pilon)
ATACTCATGGATTATCCATCAGAGGCCCAAATGACGCACAGCAATTGATA
AATTCTCATGGTGAGAATGATTTGCCAAGTGGTGGAATGTGGGAAACTGC
AAAATCACAAGCTATGGAGACATATCGTAAAGATTCCCGGCGGGGAATTC
CCAAAAGAGGTCGATCCTCTTTCCTGGCTATTGGAAAGAAAGACGATTCC
CTGAGCCTGGGGTCGAAAATGAAGAAATCTTTGGAATCACCCTCACTTAG
TGTTTGGAGACGAGGAGATTCCCTTCACTCAATCTTAAGGGTAAATCCTT
CTCTGGGGATCTGGAAGCGAGGAGATTCCCTGATGAGAAGATTTGGAAGG
AAGAATTTTGGAAAAGATAACTCTCGGAGGTCACTGGTGAGGGAAATTGA
AAATGACGCTTTTGGAATGAATAGGAAAGACGAATTTCCCTCACCAGGTA
TGTGGGAAAAAGCAAAATCCCAATATTTTGGAAAGAGAGAATTTAGAAAT
TCCATCCTCGGAAAGCATGGGAAAGACGAATTCCCCTCGCCAGCCATGTG
GGAGAAAGCGAAGAACCAATATTTTGGAAAGAGGGATATTAGAAATTCCA
TCCTTGGAAAGCATGGGAAAGACGAATTCCCTTCACCAGCCATGTGGGAA
AAAGCAAAGAACCAATATTTTGGCAAAGGAAGATAAATGTTTTTATTGTT
TGGCTTTCTTCTATTTCTTTGTCATCAATTTCAAGATACTCATGGATTAT
CCATCAGAGGCCCAAATGACGCACAGCAATTGATAAATTCTCATGGTGAG
AATGATTTGCCAAGTGGTGGAATGTGGGAAACTGCAAAATCACAAGCTAT
GGAGACATATCGTAAAGATTCCCGGCGGGGAATTCCCAAAAGAGGTCGAT
CCTCTTTCCTGGCTATTGGAAAGAAAGACGATTCCCTGAGCCTGGGGTCG
AAAATGAAGAAATCTTTGGAATCACCCTCACTTAGTGTTTGGAGACGAGG
AGATTCCCTTCACTCAATCTTAAGGGTAAATCCTTCTCTGGGGATCTGGA
AGCGAGGAGATTCCCTGATGAGAAGATTTGGAAGGAAGAATTTTGGAAAA
GATAACTCTCGGAGGTCACTGGTGAGGGAAATTGAAAATGACGCTTTTGG
AATGAATAGGAAAGACGAATTTCCCTCACCAGGTATGTGGGAAAAAGCAA
AATCCCAATATTTTGGAAAGAGAGAATTTAGAAATTCCATCCTCGGAAAG
CATGGGAAAGACGAATTCCCCTCGCCAGCCATGTGGGAGAAAGCGAAGAA
CCAATATTTTGGAAAGAGGGATATTAGAAATTCCATCCTTGGAAAGCATG
GGAAAGACGAATTCCCTTCACCAGCCATGTGGGAAAAAGCAAAGAACCAA
TATTTTGGCAAAGGAAGATAAATGTTTTTATTGTTTGGCTTTCTTCTATT
TCTTTGTCATCAATTTCAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.108MSTRG.108Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.108.1.p1.exon2MSTRG.108.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.108.1.p1.exon1MSTRG.108.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.108.1.p1MSTRG.108.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001_pilongenomesc0000001_pilon:2013010..2014735 -