MSTRG.10774.2.p1 (mRNA) -

Overview
NameMSTRG.10774.2.p1
Unique NameMSTRG.10774.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000076_pilon:413636..417524+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10774.2.p1 ID=MSTRG.10774.2.p1|Name=MSTRG.10774.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3889bp|location=Sequence derived from alignment at sc0000076_pilon:413636..417524+ (Clytia hemisphaerica_ch_hm2_pilon)
cCATATttggaaattcgaacgtttccGAATCGAACGTCTCTGGAAATGAT
CGTTGTTAAACATTTTCGAAATGGTTAGTTCATTGAAAGTCTTCTACTAC
GTAACTTCATTGAAGATTTTTCTacgataaaactccaataaatTTCATCA
TGGTAAGCATTTGGACttctttattttaaaaacattgggAGAAGATTTGT
TATAGTGATACTGTTGGGTTCTACCTTTTATTTCCTAACTTTTACAAAAG
GTAAAGCGAATATCAAAGGTTGGTTCTTAAGGGGATTAAGcaaatcttga
tttttgttttgctgaAGATTTTCTGTGGATATCCCGTACAAGGATTCAGC
AAGTTCGAGGCTTTGACTTCATTCTTTTCATTCTTTAGAGAGAGTGTATT
TCTATCCACGTCGGACAAGCCGGTGTCCAAATCGGAAACGCTTGTTGGGA
ATTGTACTGTTTGGAACATGGAATCCAACCTGACGGTCAGATGCCATCAG
ACAAAACCATTGGAGGTGGTGATGATTCATTCAACACTTTCTTCAGTGAA
ACTGGTGCTGGTAAACACGTCCCAAGAGCTGTCTTCGTTGATTTGGAACC
AACCGTTGTTGGTAAGAAAAATCTTTTCGGCAATCTACTTATCAGTCTAG
TCGAATtccaaaaactgagaaaaatttTGGTTCCGAAAATGGAACTCTTT
CatctctttttttaaatctttgaaaCCATGAAAttaaatgttctcaactt
ttctaTGTTTGATCGACGACACGCGATCTAAAATTTGTAAAGTTATTTCT
CACAAAGctacagattttcaaaaaaccgtaccgtttcacttttttttcat
ggttcaaaagaagaaagattgaattttaaggcatttttccaaaattctat
TGAAATGGCCTAATAAGTTAAGTTGAAGCAAGACGAGgcaaaattcagtg
gggataagaaaaatagcataatattttgcagcgaggatagctttatttga
ttattttcagttgggACAAAGTTGGAGTATAACTTTCCGCCGGGGAAgat
atttttgtcgatttttccAATGGGTCTgagaattataaaaaaagtttcat
ttttggaacttaAAGAAAAGTTCCTTTTTCTTGGAAGTTCGACAAGACTG
TCCATCCTATTTATCTTCCTAGATAGTGGTTGACCGACACCAGAAGGTTT
CTTAGAAATGGTTCTATAGAGataatgaaaatagaaattatTCTCATTGT
TTCTAGATTCCCATTATGCTTTACAGGCTTACGCACCTTTTGTTGCTAAG
TTCGTTTCAATTTTGAAAGCCttttttttCttagccagacggtgtcaatc
gaacaaatcgaacgccgaatcaattgaacgcaatcgaatattacccagga
tttgccgttcgattgcttcgattacgttcgataatcgaattgcaattatt
cgatcgcgttcgattacgttcgattggttcgattgcaatttttgttcgaa
gttgttcgattgacaccgtctggtcttGGTGAATTGCACCAGATTTGTAC
CGTGTCCCGTCCGTCACACTTTTTCTTACATAGCCAAGTACAAGAGTGAT
ACAGTTAGATACAAACTTTAAACATTCATTTCTGGTCAAATATCACTTTA
AAAATCCTGGTTGAAGGAGCATCTTTTCcgttttttcggaaaaaaatgaa
aaaccgtGTAATTTCAAGGCAAAATAATTTCTAACGGGTACACCTTTAGA
TGACACtggttttctttttagaaaGTATAGACTTCAATATGGTTTTGGGA
AGTTTTATGCGTGACAAGGtttttttACatcaatttttgcaaaaatcttg
TTTTGTATACAAAATTTGTCCCGTCCGTCACACAAGTACTTAATGGGTCT
TTTGGGAGTGTTTAATGCAACTGTAAagttatttttacataattcaaGGT
CTTACACTGAACCTGtttttttGTGGTTGCGAATGTTGATGcttaagaaa
ttttttgtttgagcTTCTATGTTTGGCTGGTTCATTTAATTCGGATCTCT
TTTTGTTCTTTAGACGAAGTCCGTACCGGTACCTACCGTCAACTTTTCCA
CCCCGAACAATTGATTACTGGCAAAGAAGATGCTGCCAATAACTACGCCC
GCGGACATTACACCGTCGGTAAAGAAATCATCGATTTGGTCCTCGACAGA
ATCCGAAAACTCGCTGATCAATGTACTGGTCTTCAAGGTTTCTTGATCTT
CCACTCCTTTGGTGGTGGTACCGGATCTGGATTCTCCTCCTTATTGATGG
AACGTCTCTCCGTCGATTTCGGTAAAAAATCCAAGTTGGAATTTGCCATC
TACCCAGCTCCTCAAATCTCAACTGCTGTTGTTGAGCCATATAACTCTAT
CTTGACCACCCACACCACCTTGGAGCACTCTGACTGTGCTTTCATGGTTG
ACAATGAAGCCATTTATGATATCTGCCGTCGCAACTTGGACATCGAACGT
CCAACTTACACCAACTTGAACAGATTGATTGGACAAATCGTCTCATCCAT
CACTGCTTCTCTTCGATTTGATGGTGCTTTGAACGTCGATTTGACTGAGT
TCCAAACTAACTTGGTCCCATACCCACGTATTCATTTCCCACTTGCTACC
TACGCACCAATCATCTCTGCTGAGAAAGCTTACCACGAACAACTCACCGT
TGCTGAAATCACCAACGCTTGTTTCGAACCATCCAACCAAATGGTCAAAT
GTGATCCTCGTCATGGAAAATACATGGCCTGTTGTATGTTGTACCGTGGT
GATGTTGTCCCAAAGGATGTCAATGCTGCCATTGCCACCATCAAAACCAA
ACGAACCATCCAATTTGTCGACTGGTGTCCAACTGGATTCAAAGTCGGAA
TCAACTATCAACCACCAACTGTCGTTCCAGGAGGTGATCTTGCCAAAGTC
CAACGTGCCGTCTGCATGTTGTCCAACACCACTGCCATCGCTGAGGCTTG
GGCCCGTTTGGATCACAAATTCGATTTGATGTACGCTAAACGTGCTTTCG
TCCACTGGTATGTCGGAGAAGGTAAGAtagaaatgttattttctccTGTC
TATTGTAACCGTTGTTAGTTTTAGAGATTTCAACAAAGGTTTTAGATCAA
ATTTATTCATTTCTGTATCACTAGAAATCCTGACATCAACTTGTGTGTAT
TTTCTCCATTCAAATCTTAACATACTACCGTGGTCTATACCTATCAACTT
TCTAATCactttttaaaacttactttcaCTTCAGGTATGGAAGAAGGAGA
ATTCTCTGAAGCTCGTGAGGATTTGGCTGCTTTGGAGAAAGATTACGAAG
AAGTCGGTGTCGATTCCGTTGAAGCCGAAGGGGAAGAAGAAGGAGATGAA
TATTAAATCATCATCCCTCCCTTCACCAAAAACTTGTAAATAGTGTAAAT
AGTCTTGTTCCGAATAAATTTATTGATGATAGGAAAATTATAACTAAtct
ttctgttttattttttttattacaaaaatttcGGATACCTGTCACGTCAA
ACAAAATACCTTTTGAAGATTGGACTAACTTTTCATATGTGTAGAGGCGG
GGGGTCAGTACAAAAATTTAGTAGtaaaaaaagacagaaaaagcggactg
ggttcgagttccCATATTCTTGATATGTCCACTAAAAAGtttttcgagtt
agctttttttcataactcggatttctttgtagatttttttcttttatgta
GAAAATCTAAATGTCTTTAGATAAATTTGCATTTACTttaaagggaacga
cgcatggtatatttatgaaatgctgatctagcattggcacaaacacccat
acggaggagtatttaggagtgctggatcataacaaaaac

Coding sequence (CDS) from alignment at sc0000076_pilon:413636..417524+

>MSTRG.10774.2.p1 ID=MSTRG.10774.2.p1|Name=MSTRG.10774.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5424bp|location=Sequence derived from alignment at sc0000076_pilon:413636..417524+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAGAGTGTATTTCTATCCACGTCGGACAAGCCGGTGTCCAAATCGG
AAACGCTTGTTGGGAATTGTACTGTTTGGAACATGGAATCCAACCTGACG
GTCAGATGCCATCAGACAAAACCATTGGAGGTGGTGATGATTCATTCAAC
ACTTTCTTCAGTGAAACTGGTGCTGGTAAACACGTCCCAAGAGCTGTCTT
CGTTGATTTGGAACCAACCGTTGTTGACGAAGTCCGTACCGGTACCTACC
GTCAACTTTTCCACCCCGAACAATTGATTACTGGCAAAGAAGATGCTGCC
AATAACTACGCCCGCGGACATTACACCGTCGGTAAAGAAATCATCGATTT
GGTCCTCGACAGAATCCGAAAACTCGCTGATCAATGTACTGGTCTTCAAG
GTTTCTTGATCTTCCACTCCTTTGGTGGTGGTACCGGATCTGGATTCTCC
TCCTTATTGATGGAACGTCTCTCCGTCGATTTCGGTAAAAAATCCAAGTT
GGAATTTGCCATCTACCCAGCTCCTCAAATCTCAACTGCTGTTGTTGAGC
CATATAACTCTATCTTGACCACCCACACCACCTTGGAGCACTCTGACTGT
GCTTTCATGGTTGACAATGAAGCCATTTATGATATCTGCCGTCGCAACTT
GGACATCGAACGTCCAACTTACACCAACTTGAACAGATTGATTGGACAAA
TCGTCTCATCCATCACTGCTTCTCTTCGATTTGATGGTGCTTTGAACGTC
GATTTGACTGAGTTCCAAACTAACTTGGTCCCATACCCACGTATTCATTT
CCCACTTGCTACCTACGCACCAATCATCTCTGCTGAGAAAGCTTACCACG
AACAACTCACCGTTGCTGAAATCACCAACGCTTGTTTCGAACCATCCAAC
CAAATGGTCAAATGTGATCCTCGTCATGGAAAATACATGGCCTGTTGTAT
GTTGTACCGTGGTGATGTTGTCCCAAAGGATGTCAATGCTGCCATTGCCA
CCATCAAAACCAAACGAACCATCCAATTTGTCGACTGGTGTCCAACTGGA
TTCAAAGTCGGAATCAACTATCAACCACCAACTGTCGTTCCAGGAGGTGA
TCTTGCCAAAGTCCAACGTGCCGTCTGCATGTTGTCCAACACCACTGCCA
TCGCTGAGGCTTGGGCCCGTTTGGATCACAAATTCGATTTGATGTACGCT
AAACGTGCTTTCGTCCACTGGTATGTCGGAGAAGGTATGGAAGAAGGAGA
ATTCTCTGAAGCTCGTGAGGATTTGGCTGCTTTGGAGAAAGATTACGAAG
AAGTCGGTGTCGATTCCGTTGAAGCCGAAGGGGAAGAAGAAGGAGATGAA
TATTAAATGAGAGAGTGTATTTCTATCCACGTCGGACAAGCCGGTGTCCA
AATCGGAAACGCTTGTTGGGAATTGTACTGTTTGGAACATGGAATCCAAC
CTGACGGTCAGATGCCATCAGACAAAACCATTGGAGGTGGTGATGATTCA
TTCAACACTTTCTTCAGTGAAACTGGTGCTGGTAAACACGTCCCAAGAGC
TGTCTTCGTTGATTTGGAACCAACCGTTGTTGACGAAGTCCGTACCGGTA
CCTACCGTCAACTTTTCCACCCCGAACAATTGATTACTGGCAAAGAAGAT
GCTGCCAATAACTACGCCCGCGGACATTACACCGTCGGTAAAGAAATCAT
CGATTTGGTCCTCGACAGAATCCGAAAACTCGCTGATCAATGTACTGGTC
TTCAAGGTTTCTTGATCTTCCACTCCTTTGGTGGTGGTACCGGATCTGGA
TTCTCCTCCTTATTGATGGAACGTCTCTCCGTCGATTTCGGTAAAAAATC
CAAGTTGGAATTTGCCATCTACCCAGCTCCTCAAATCTCAACTGCTGTTG
TTGAGCCATATAACTCTATCTTGACCACCCACACCACCTTGGAGCACTCT
GACTGTGCTTTCATGGTTGACAATGAAGCCATTTATGATATCTGCCGTCG
CAACTTGGACATCGAACGTCCAACTTACACCAACTTGAACAGATTGATTG
GACAAATCGTCTCATCCATCACTGCTTCTCTTCGATTTGATGGTGCTTTG
AACGTCGATTTGACTGAGTTCCAAACTAACTTGGTCCCATACCCACGTAT
TCATTTCCCACTTGCTACCTACGCACCAATCATCTCTGCTGAGAAAGCTT
ACCACGAACAACTCACCGTTGCTGAAATCACCAACGCTTGTTTCGAACCA
TCCAACCAAATGGTCAAATGTGATCCTCGTCATGGAAAATACATGGCCTG
TTGTATGTTGTACCGTGGTGATGTTGTCCCAAAGGATGTCAATGCTGCCA
TTGCCACCATCAAAACCAAACGAACCATCCAATTTGTCGACTGGTGTCCA
ACTGGATTCAAAGTCGGAATCAACTATCAACCACCAACTGTCGTTCCAGG
AGGTGATCTTGCCAAAGTCCAACGTGCCGTCTGCATGTTGTCCAACACCA
CTGCCATCGCTGAGGCTTGGGCCCGTTTGGATCACAAATTCGATTTGATG
TACGCTAAACGTGCTTTCGTCCACTGGTATGTCGGAGAAGGTATGGAAGA
AGGAGAATTCTCTGAAGCTCGTGAGGATTTGGCTGCTTTGGAGAAAGATT
ACGAAGAAGTCGGTGTCGATTCCGTTGAAGCCGAAGGGGAAGAAGAAGGA
GATGAATATTAAATGAGAGAGTGTATTTCTATCCACGTCGGACAAGCCGG
TGTCCAAATCGGAAACGCTTGTTGGGAATTGTACTGTTTGGAACATGGAA
TCCAACCTGACGGTCAGATGCCATCAGACAAAACCATTGGAGGTGGTGAT
GATTCATTCAACACTTTCTTCAGTGAAACTGGTGCTGGTAAACACGTCCC
AAGAGCTGTCTTCGTTGATTTGGAACCAACCGTTGTTGACGAAGTCCGTA
CCGGTACCTACCGTCAACTTTTCCACCCCGAACAATTGATTACTGGCAAA
GAAGATGCTGCCAATAACTACGCCCGCGGACATTACACCGTCGGTAAAGA
AATCATCGATTTGGTCCTCGACAGAATCCGAAAACTCGCTGATCAATGTA
CTGGTCTTCAAGGTTTCTTGATCTTCCACTCCTTTGGTGGTGGTACCGGA
TCTGGATTCTCCTCCTTATTGATGGAACGTCTCTCCGTCGATTTCGGTAA
AAAATCCAAGTTGGAATTTGCCATCTACCCAGCTCCTCAAATCTCAACTG
CTGTTGTTGAGCCATATAACTCTATCTTGACCACCCACACCACCTTGGAG
CACTCTGACTGTGCTTTCATGGTTGACAATGAAGCCATTTATGATATCTG
CCGTCGCAACTTGGACATCGAACGTCCAACTTACACCAACTTGAACAGAT
TGATTGGACAAATCGTCTCATCCATCACTGCTTCTCTTCGATTTGATGGT
GCTTTGAACGTCGATTTGACTGAGTTCCAAACTAACTTGGTCCCATACCC
ACGTATTCATTTCCCACTTGCTACCTACGCACCAATCATCTCTGCTGAGA
AAGCTTACCACGAACAACTCACCGTTGCTGAAATCACCAACGCTTGTTTC
GAACCATCCAACCAAATGGTCAAATGTGATCCTCGTCATGGAAAATACAT
GGCCTGTTGTATGTTGTACCGTGGTGATGTTGTCCCAAAGGATGTCAATG
CTGCCATTGCCACCATCAAAACCAAACGAACCATCCAATTTGTCGACTGG
TGTCCAACTGGATTCAAAGTCGGAATCAACTATCAACCACCAACTGTCGT
TCCAGGAGGTGATCTTGCCAAAGTCCAACGTGCCGTCTGCATGTTGTCCA
ACACCACTGCCATCGCTGAGGCTTGGGCCCGTTTGGATCACAAATTCGAT
TTGATGTACGCTAAACGTGCTTTCGTCCACTGGTATGTCGGAGAAGGTAT
GGAAGAAGGAGAATTCTCTGAAGCTCGTGAGGATTTGGCTGCTTTGGAGA
AAGATTACGAAGAAGTCGGTGTCGATTCCGTTGAAGCCGAAGGGGAAGAA
GAAGGAGATGAATATTAAATGAGAGAGTGTATTTCTATCCACGTCGGACA
AGCCGGTGTCCAAATCGGAAACGCTTGTTGGGAATTGTACTGTTTGGAAC
ATGGAATCCAACCTGACGGTCAGATGCCATCAGACAAAACCATTGGAGGT
GGTGATGATTCATTCAACACTTTCTTCAGTGAAACTGGTGCTGGTAAACA
CGTCCCAAGAGCTGTCTTCGTTGATTTGGAACCAACCGTTGTTGACGAAG
TCCGTACCGGTACCTACCGTCAACTTTTCCACCCCGAACAATTGATTACT
GGCAAAGAAGATGCTGCCAATAACTACGCCCGCGGACATTACACCGTCGG
TAAAGAAATCATCGATTTGGTCCTCGACAGAATCCGAAAACTCGCTGATC
AATGTACTGGTCTTCAAGGTTTCTTGATCTTCCACTCCTTTGGTGGTGGT
ACCGGATCTGGATTCTCCTCCTTATTGATGGAACGTCTCTCCGTCGATTT
CGGTAAAAAATCCAAGTTGGAATTTGCCATCTACCCAGCTCCTCAAATCT
CAACTGCTGTTGTTGAGCCATATAACTCTATCTTGACCACCCACACCACC
TTGGAGCACTCTGACTGTGCTTTCATGGTTGACAATGAAGCCATTTATGA
TATCTGCCGTCGCAACTTGGACATCGAACGTCCAACTTACACCAACTTGA
ACAGATTGATTGGACAAATCGTCTCATCCATCACTGCTTCTCTTCGATTT
GATGGTGCTTTGAACGTCGATTTGACTGAGTTCCAAACTAACTTGGTCCC
ATACCCACGTATTCATTTCCCACTTGCTACCTACGCACCAATCATCTCTG
CTGAGAAAGCTTACCACGAACAACTCACCGTTGCTGAAATCACCAACGCT
TGTTTCGAACCATCCAACCAAATGGTCAAATGTGATCCTCGTCATGGAAA
ATACATGGCCTGTTGTATGTTGTACCGTGGTGATGTTGTCCCAAAGGATG
TCAATGCTGCCATTGCCACCATCAAAACCAAACGAACCATCCAATTTGTC
GACTGGTGTCCAACTGGATTCAAAGTCGGAATCAACTATCAACCACCAAC
TGTCGTTCCAGGAGGTGATCTTGCCAAAGTCCAACGTGCCGTCTGCATGT
TGTCCAACACCACTGCCATCGCTGAGGCTTGGGCCCGTTTGGATCACAAA
TTCGATTTGATGTACGCTAAACGTGCTTTCGTCCACTGGTATGTCGGAGA
AGGTATGGAAGAAGGAGAATTCTCTGAAGCTCGTGAGGATTTGGCTGCTT
TGGAGAAAGATTACGAAGAAGTCGGTGTCGATTCCGTTGAAGCCGAAGGG
GAAGAAGAAGGAGATGAATATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10774MSTRG.10774Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10774.2.p1MSTRG.10774.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10774.2.p1.exon1MSTRG.10774.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10774.2.p1.exon2MSTRG.10774.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10774.2.p1.exon3MSTRG.10774.2.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10774.2.p1.exon4MSTRG.10774.2.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000076_pilongenomesc0000076_pilon:413636..417524 +