MSTRG.10766.3.p1 (mRNA) -

Overview
NameMSTRG.10766.3.p1
Unique NameMSTRG.10766.3.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000076_pilon:311039..313333+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10766.3.p1 ID=MSTRG.10766.3.p1|Name=MSTRG.10766.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2295bp|location=Sequence derived from alignment at sc0000076_pilon:311039..313333+ (Clytia hemisphaerica_ch_hm2_pilon)
TAAATACCAAGCTGTGAAAAGACTGGCACACATCTTCCTGAATCATTGTA CAAGAGGTACAGGTAGATAAAGAAAGCATCAACATGTTGAGGTTGACACT GGCAATTGTGTTTGTGGCTCTCGCAGCTCAAGCCCAAGGAGAGGAGGTAA GTGCTGTAAacacttttcttttataagaaccagtaaaattttgcggaggc tgttcttattttttcttgacACTTAgagtctcaaattgttcttatcatgt tcttatatagagtgtaaatgagatattttaggctttaaacccaattttta ctattttaacacctaaattgcttgaaattgagtaatttcaggctcaaaat ttttctaattttgtggcaattttgagcctcattgttctcataaaaaaagt gtatattcTATGCGATTTTTTATTAGGAatacgtttataaggaacttgag gcagAAAATAGtccgaaaaataagaaattacgAAGGAACTGTTCAGGCTT AGAATAATAAAACAAGTAATTTTTAAGTTACATACTTAGaaaatccaaac ttagcagcttgGTAAATAAGGagctcgataaggaactttgaggctgaaat tctcttgaaaatataacaaacaGAGCCAAgttaaaggtttcatttttaca caagtgttcccgtttcatatgagacacatatttcatttcAGGACAATgtt tgcctattgttatattatgttgatataaacaaaaaatgattttctttttc ctctttgttaccaatcttgctccacatccgtgtcaattcaatgtgaaaaa gcttgtgaattaaaattgatgagtataAGCAAACGATAcaactcttattt aaaaacaagacCTTAAAGGCCggactccactttcgcgcgaaatgggcgac cgtttttttctaaccttttttgTCTGAAGAAAAGAtcacgtcataaaaaa gtttcgcgcgaacaaaaaaaaagttgaaagaagttttttcatccgttacg tcaatttcgaccaatggaattgcttcattttcaacCGTCCAataacctta caaaaacgtcaaaaaaaataaataataataatataaaaaatgtgtacatt TACGAGGCTTTCTAAATCAGGATATGGAATGATTGctctaaaataaaaac tttctgaTGAACAGAAGCTAAAATCATATAAAATACCGACTCTATCTAAT CATCTACAGTAtctattgttttttcttttttagaacgAAAAGTTCCCAAG CTTGAGTCCATCAGCGTCCTTAAACCCAAGCTGGCGCCCATCGTGGAAAC CAAGCTATCGCCCATCGTGGAACCCAAGCTGGCGCCCATCGTGGAAACCA AGCCATCGTCCATCGTGGAACCCAAGCTATCGCCCATCGTGGAACCCAAG CTGGCGCCCATCGTGGAAACCAAGCTATCGCCCATCGTGGAACCCAAGCT ATCGCCCATCGTGGAACCCAAGCTATCGCCCCATCGTGGAACCCAAGCTG GCGCCCATCGTGGAAACCAAGCTATCGCCCATCGTGGAACCCAAGCTATC GCCCATCGTGGAACCCAAGCTATCGCCCATCGTGGAACCCAAGCTATCGC CCATCGTGGAACCCAAGCTATCGCCCATCGTGGAACCCAAGCTGGCGCCC ATCGTGGAAACCAAGCTATCGCCCATCGTGGAACCCAAGCTATCGCCCAT CGTGGAACCCAAGCTGGCGCCCATCGTGGAAACCAAGCTATCGCCCATCG TGGAAACCAAGCTGGCGCCCGTCGTGGTTCCCAACCTGGCGCCCATCATG GTTTGATGACTCTGAGATAGACACAACAGGACGCCCATCAGGCAGACCAA GTGGACACCCATCAGGCCGACCAAGTGGACACCCATCAGGCCGACCAAGT GGACACCCATCAGGCCGACCAAGTGGACACCCATCAGGCCGACCAAGTGG ACACCCATCAGGCCGACCAAGTGGACACCCATCAGGCCGACCCAAGTGGA CACCATCAGGCCGACCAAGTGGACACCCATCAGGCCGACCAAGTGGACCC CACCCCATCAGGCCGACCAAGTGGACACCCATCAGGCCGACCAAGTGGAC ACATACCAAGTGGACACCCATCCAGGCCGACAAGTGGACACCCATCAGGC CGACCAAGTGGACACCCATCGGGCCGACCAAGTGGACACCCATCAGGCCG ACCAAGTGGACACCCGTCTGAGCCAAGACCAACCGAATaggcttttaaaa atattttattatgaagaataaaaaaaattgaatactgTACCAAAC

Coding sequence (CDS) from alignment at sc0000076_pilon:311039..313333+

>MSTRG.10766.3.p1 ID=MSTRG.10766.3.p1|Name=MSTRG.10766.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1272bp|location=Sequence derived from alignment at sc0000076_pilon:311039..313333+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGAGGTTGACACTGGCAATTGTGTTTGTGGCTCTCGCAGCTCAAGC
CCAAGGAGAGGAGaacgAAAAGTTCCCAAGCTTGAGTCCATCAGCGTCCT
TAAACCCAAGCTGGCGCCCATCGTGGAAACCAAGCTATCGCCCATCGTGG
AACCCAAGCTGGCGCCCATCGTGGAAACCAAGCCATCGTCCATCGTGGAA
CCCAAGCTATCGCCCATCGTGGAACCCAAGCTGGCGCCCATCGTGGAAAC
CAAGCTATCGCCCATCGTGGAACCCAAGCTATCGCCCATCGTGGAACCCA
AGCTATCGCCCCATCGTGGAACCCAAGCTGGCGCCCATCGTGGAAACCAA
GCTATCGCCCATCGTGGAACCCAAGCTATCGCCCATCGTGGAACCCAAGC
TATCGCCCATCGTGGAACCCAAGCTATCGCCCATCGTGGAACCCAAGCTA
TCGCCCATCGTGGAACCCAAGCTGGCGCCCATCGTGGAAACCAAGCTATC
GCCCATCGTGGAACCCAAGCTATCGCCCATCGTGGAACCCAAGCTGGCGC
CCATCGTGGAAACCAAGCTATCGCCCATCGTGGAAACCAAGCTGGCGCCC
GTCGTGGTTCCCAACCTGGCGCCCATCATGGTTTGAATGTTGAGGTTGAC
ACTGGCAATTGTGTTTGTGGCTCTCGCAGCTCAAGCCCAAGGAGAGGAGa
acgAAAAGTTCCCAAGCTTGAGTCCATCAGCGTCCTTAAACCCAAGCTGG
CGCCCATCGTGGAAACCAAGCTATCGCCCATCGTGGAACCCAAGCTGGCG
CCCATCGTGGAAACCAAGCCATCGTCCATCGTGGAACCCAAGCTATCGCC
CATCGTGGAACCCAAGCTGGCGCCCATCGTGGAAACCAAGCTATCGCCCA
TCGTGGAACCCAAGCTATCGCCCATCGTGGAACCCAAGCTATCGCCCCAT
CGTGGAACCCAAGCTGGCGCCCATCGTGGAAACCAAGCTATCGCCCATCG
TGGAACCCAAGCTATCGCCCATCGTGGAACCCAAGCTATCGCCCATCGTG
GAACCCAAGCTATCGCCCATCGTGGAACCCAAGCTATCGCCCATCGTGGA
ACCCAAGCTGGCGCCCATCGTGGAAACCAAGCTATCGCCCATCGTGGAAC
CCAAGCTATCGCCCATCGTGGAACCCAAGCTGGCGCCCATCGTGGAAACC
AAGCTATCGCCCATCGTGGAAACCAAGCTGGCGCCCGTCGTGGTTCCCAA
CCTGGCGCCCATCATGGTTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10766MSTRG.10766Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10766.3.p1MSTRG.10766.3.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10766.3.p1.exon1MSTRG.10766.3.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10766.3.p1.exon2MSTRG.10766.3.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10766.3.p1.exon3MSTRG.10766.3.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000076_pilongenomesc0000076_pilon:311039..313333 +