MSTRG.10764.1.p1 (mRNA) -

Overview
NameMSTRG.10764.1.p1
Unique NameMSTRG.10764.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000076_pilon:253951..257503+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10764.1.p1 ID=MSTRG.10764.1.p1|Name=MSTRG.10764.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3553bp|location=Sequence derived from alignment at sc0000076_pilon:253951..257503+ (Clytia hemisphaerica_ch_hm2_pilon)
ACGCATAAACATACATAAACGACTGAAAGTTGTtgaaaaaagttattcaa
aGCTGCGAACTTTGAGATGAtgttgaaatcaaaaatttaatttaattgag
TTTCAGAGAGTTTCACGAAGGCTTTAAAGGGGGATCAATCACATACAGTA
ACATAAGAAGTCATTTCGAGCACTCAAAGCTTTAAAAGATCGATTCTGTC
GAATTCTGATAATAAAAAGAGTCGACTAACACAGGCGCGACAATGTTTAT
AATTTTATGTATTGGTGGTCTCATTGTCGCTACAGAGGCGGTTTTACGCC
CGGGTGGAATACCAAACTCCACTTACATAGCTTCGAAAGACACATGGGTG
TGCCCCATTATCAAAGAAGAGGGCGTTACTGGCAGTTTGAAGAAGGTAAT
AATAAGcctccttcctctcttcctcccttcctccttcctGAATCTGTATG
AAAAGGTTTTTTATCATCACCCCAGACATTGTATGCTTTGCTAAAGTGCG
TGGTTGAAGTTTTTGCCACTGTTTTACGAAACAGACAATGAGTAGTGACA
GCAGTGAATCAAATCATtcatcgaaaaatttttgttttctaaacaTTATA
TGCTTTAAAGAGAGACACTCGGCTAAATTGTAATTGAAGATTTGACAGTG
TTTAGCGTGACAGACAGTGGCATCGAATCGAATCGAACTGCAACTTTTAA
GAAGATATTGTTTATGTTTTCTAAACATTATATGCTTTAGAAAGAGAGAC
ACTTGGCTTGTAGTTGAAGTTTTGACAGTGTTTAGCGTGATAGACAGTAA
TACTCTATACCAAAGTGTAtatcacgtttatcgcttcgtagtactcTATg
gcaaagaattttgaaataaaccgTAGctactgggtttgtgtacagacaag
acAGGAATCGAATCGAACTTCAACTTTTTAAGAAGACTGTTTATGGTTTC
ATCTTGTTAGGCATCACTGAAGGTCACTCATTGCCCTGTTGCATCAGATG
ATGGGTTCCGATGTCCAGGATATATGAATCCGGTCGATTTCGTTTTGACC
AAAGGAGAAGAAGCTGTCATTATCAAGGAAGGAAATAAATCTTACTACCA
GACATCACAACTTGCGCAGTTCTTTGGTAAGCATTCGTCTTCCTTCTTAT
CAAATTCTACATATAGCTACCTTAGTCCAAGTACCCcaaattcaaaaggg
gcctaagtccaggtacaccaaaatctcaaaatggGCCTAAGTCCAAGCTC
CCcaaattcaaaaggggcctaagttcAAGTTCCCCGAATTCAAAAGGGTC
TTAAGTCCAAGCTCTCCAAATTCAAAAGAGTCCTAAGTCCTAGTACCCCT
AATTCAAGTTCTTTGGTAAGCatttctggcgagaaagtcactTCTGGGCT
ATTATTAAATGCTTTTTGATCctcttaagtctagtgttaaaactctacaC
TTCCAATCTAAGTTAGAGCGCTTTCAAATCGTCTGTGGCTATAAGATCTT
GtggggatttcccttttttctcaaatattatgacgtTGATtgtaccttaa
ttcaaaagaaGCCTAAGCCAATCAACCccaattcaaaaggggccttaGTC
CAAGTACCCCCAATTCAAAAGGGATCTAAGTCCAGATACCCCAATTCAAA
AGGGGCCCCAAATCTAGGTACCCCAAAAtctcaaaaggggcctaagtcca
agTACCCCAAAATCTCAAATGGGGCCTAAGTCCAGGTACCCCAAAATCTC
AAAAGGGACCTAAGTCCAGGTACCCCCAATTCAAAAGGGGCTTAAttcca
ttttcattaaatttgagatTGTCACAAAGCACTGCTTCTTCGTTATCAAT
CATAATTCATATAGTTAGTGGagtacaatcagggacaaaatacttggcac
aaaaaggaaattcaccggggtgttttgaaaccataatcgatttgtaagtg
ctctaaagtaggttcgaagggtagagttttaacgctagacttttgactta
ggaccttaggatctgaggatccaaaagtttaaaaatggtccagtagggct
tgaaatatagcctagaaaccaataaatccctccgaGATCAAAATACTCGA
TGAAATCAaattgaaggcctaaaaattgagaTTCTcactcgaacttcaat
tttcgaaaaattgtaaattagccaaaagtgccaatatattatgacactGA
TTGTAGTTATAGAAtggagtctccttaactcggaTAAGTTTTATGGTTCC
TTCACTAGTTAACAATGCTTTATAAACCTCACTCAATAACACGAAATTTC
CAGctctcgaacaaatttgcgttcccgTGTGTTTTTGAGTCATGGAGACT
AAACTGTACTAATATTCCCGTGTGTTTTTGAGTCATGGAGACTAAACTGT
ACTAATATTCCCGTGTGTTTTTGAGTCATGGAGACTAAACTGTACTAAAT
TGGATATATCCCCTTTATTTTTCAGGCAACAAGGTTTGTATTAGTTATCC
TTATTATGCTTACACAACTTCGAAGAAAGAAATCACAGCCCAATGTCGCT
CCAAATGTTTCAAAACTACACATGGTCCGATCATTGCAAACAGAATGATT
AATTTATTAGGGCGTTATGCAGGTAATGGCTATCGTTACGATGTAACATC
TTCGAGTACTACGATAAAGCCGATGTGGTTGTTCACACTACTGTTTGTGA
TGCTTGGTTTTAGCAGCATGCCTTAGAAAACCATTACAATTTACGAAAGC
ATCCAGCTAGGACCTTTTTTCaacatctgtttcccaggcatagccttcct
ggaaaatttgaactATCGGCCAAAAGtgtcaaaaatcttattcctagaaa
tgaagatgttttgaaaattcttaatctcaaagtatcttccctAGAAAATT
GGGTCtgtttccatttttcaaaaaggaagaACTCTTTAGCTAAGACAATG
TAGATAGCGGTGATAAAAGCTTCAGGATGTAGCGGGATCTAAATGAGATG
AATAAGTTCTGCCTGTCGAACCTTACACGACGAAAAACCTTTACGAACCT
TTGAGAAATCTTTACGAAGACAACCTTTATGACCTTAGAAGGTCATAAGG
TCATAAATTTTATTATAATATTCATATATTGTACCTATTCTATACTTATG
CaaatttttatgattctgaaTGAATATGTTTAAATAAATTGAAGTTTTAA
GAAGAGTAGACGCAACGGGCCacgttcattttttttattccgGCATTTTT
CATTTATGCATTCATTCAATGTATATGTACAGTGATTATACAATAAAATT
ATTACACAatatcattttgatattttgatcaaaaactcgtcaaattttat
tgttccatatTTTAAGACCTCATACCGCGTCATACGAGGTTAATAAAGGT
CCGAATTGCTACGAAAATAATGCTGAGCTTGCGAAAACATTGCAGTTATT
AAAACAAATCATTGCGCGCTGAACGAATGTTCTACATTTTCTACAGtcca
attttgaaaatacacgtttttttataacagaaaactatataagagcataa
gga

Coding sequence (CDS) from alignment at sc0000076_pilon:253951..257503+

>MSTRG.10764.1.p1 ID=MSTRG.10764.1.p1|Name=MSTRG.10764.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1710bp|location=Sequence derived from alignment at sc0000076_pilon:253951..257503+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTATAATTTTATGTATTGGTGGTCTCATTGTCGCTACAGAGGCGGT
TTTACGCCCGGGTGGAATACCAAACTCCACTTACATAGCTTCGAAAGACA
CATGGGTGTGCCCCATTATCAAAGAAGAGGGCGTTACTGGCAGTTTGAAG
AAGGCATCACTGAAGGTCACTCATTGCCCTGTTGCATCAGATGATGGGTT
CCGATGTCCAGGATATATGAATCCGGTCGATTTCGTTTTGACCAAAGGAG
AAGAAGCTGTCATTATCAAGGAAGGAAATAAATCTTACTACCAGACATCA
CAACTTGCGCAGTTCTTTGGCAACAAGGTTTGTATTAGTTATCCTTATTA
TGCTTACACAACTTCGAAGAAAGAAATCACAGCCCAATGTCGCTCCAAAT
GTTTCAAAACTACACATGGTCCGATCATTGCAAACAGAATGATTAATTTA
TTAGGGCGTTATGCAGGTAATGGCTATCGTTACGATGTAACATCTTCGAG
TACTACGATAAAGCCGATGTGGTTGTTCACACTACTGTTTGTGATGCTTG
GTTTTAGCAGCATGCCTTAGATGTTTATAATTTTATGTATTGGTGGTCTC
ATTGTCGCTACAGAGGCGGTTTTACGCCCGGGTGGAATACCAAACTCCAC
TTACATAGCTTCGAAAGACACATGGGTGTGCCCCATTATCAAAGAAGAGG
GCGTTACTGGCAGTTTGAAGAAGGCATCACTGAAGGTCACTCATTGCCCT
GTTGCATCAGATGATGGGTTCCGATGTCCAGGATATATGAATCCGGTCGA
TTTCGTTTTGACCAAAGGAGAAGAAGCTGTCATTATCAAGGAAGGAAATA
AATCTTACTACCAGACATCACAACTTGCGCAGTTCTTTGGCAACAAGGTT
TGTATTAGTTATCCTTATTATGCTTACACAACTTCGAAGAAAGAAATCAC
AGCCCAATGTCGCTCCAAATGTTTCAAAACTACACATGGTCCGATCATTG
CAAACAGAATGATTAATTTATTAGGGCGTTATGCAGGTAATGGCTATCGT
TACGATGTAACATCTTCGAGTACTACGATAAAGCCGATGTGGTTGTTCAC
ACTACTGTTTGTGATGCTTGGTTTTAGCAGCATGCCTTAGATGTTTATAA
TTTTATGTATTGGTGGTCTCATTGTCGCTACAGAGGCGGTTTTACGCCCG
GGTGGAATACCAAACTCCACTTACATAGCTTCGAAAGACACATGGGTGTG
CCCCATTATCAAAGAAGAGGGCGTTACTGGCAGTTTGAAGAAGGCATCAC
TGAAGGTCACTCATTGCCCTGTTGCATCAGATGATGGGTTCCGATGTCCA
GGATATATGAATCCGGTCGATTTCGTTTTGACCAAAGGAGAAGAAGCTGT
CATTATCAAGGAAGGAAATAAATCTTACTACCAGACATCACAACTTGCGC
AGTTCTTTGGCAACAAGGTTTGTATTAGTTATCCTTATTATGCTTACACA
ACTTCGAAGAAAGAAATCACAGCCCAATGTCGCTCCAAATGTTTCAAAAC
TACACATGGTCCGATCATTGCAAACAGAATGATTAATTTATTAGGGCGTT
ATGCAGGTAATGGCTATCGTTACGATGTAACATCTTCGAGTACTACGATA
AAGCCGATGTGGTTGTTCACACTACTGTTTGTGATGCTTGGTTTTAGCAG
CATGCCTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10764MSTRG.10764Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10764.1.p1MSTRG.10764.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10764.1.p1.exon1MSTRG.10764.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10764.1.p1.exon2MSTRG.10764.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10764.1.p1.exon3MSTRG.10764.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000076_pilongenomesc0000076_pilon:253951..257503 +