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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000076_pilon:9940..13857+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10748.1.p1 ID=MSTRG.10748.1.p1|Name=MSTRG.10748.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3918bp|location=Sequence derived from alignment at sc0000076_pilon:9940..13857+ (Clytia hemisphaerica_ch_hm2_pilon)
tgtaacattttttgaaaagtgtataATTTTGGAGAGATGGCATCTGGATT
GCAAtccaaagaaaatcaagaaggagacaaattgaaagtagaacaagaaa
atcgaaacaaaggaaaagaaactgaggaaaaacataaaacatccaaacac
aaaTGGTACCATGTTAATCCAAATGCAATCTCATCTAAATGTGCTTATTT
CTTTGAATGTGCCATGCGGAGTGGATTGCAACCAAATCTGGTGATGTTTT
TCACCAGTATTGGTTTAAATAAAGCTGAAGCTGGATTCATTGTAGGTCTA
AGGTATTTgcagatctttttttttttgcaaacaacTAGCAATGTGCCATG
TTGACAAGCCCGACCTAACAACAGGCCAGGGGCCTTTTAACTCTCGAGGA
Aatcaatgaggtgaattttgcgagtctgtagttttttccgtgtttaagtc
taaacagagctttacgccgaaaatacattcgaattttcaaatgtaagcag
cgctttgaaaatcgaatgttttttagtGTTCACACGAGCGcgcaaatgtt
ttcgaatgttttgaaacaatttattttagtaagtacgttcaatctggaca
gtctggaaaatgttatttgtcactcgatctttcgaaatcattgaaatctt
tttttctgagaggggaaggactctgatattttctttttctaattgTTGCA
TACCGGTATTCTTTTCATTTAACAGagtcaaaatgtattttctttcaaag
aattatgaTCTATAATCAGGAAACACTTCTTAGTAATTTTAACTGTATTT
TGGATGCACAAGTTTATTGGAAGGGCATTTAATATTTTTGCCCAGAgtta
tagcttcagttttcatttttattcacttctttgttgtttacaattcttta
ttttattctccaaaaagctttagattttttttggtgttgtcaatgatgat
gatgttagtgcaatttaagaacgaagaagatgggaagaagaaaaaaccga
gctttcttcagttttgagatgtttttgaatttgaaatgcgtgctggagct
caactacaataaaacaaaggttagttaacttttattaattgtGGATTCTT
GATATTATAAGTCGCAGATGACAAGAGCAAGAGAATTCTCTCACTGTCAA
CTGAAGCAGGAGTTGTGGTACCACCTCAAAATTGGTCGAAACTCATGGAG
AATCCAGCCTGACTCAGCTCATTATTATTTGCTGGCAAATGCTAAACCCC
CTTCACTCTCCTCACTTTAGATATTTAATTTCCCTACATAAGAGCTaagg
ctctttcattttctaagaTCCCTGTTCTGGCAGAATGTAGATTAAAATGC
TATGTTATGCTATTATGGtctttaaagagaatggaagTAAAAGATGGGTA
CTTTATGCTAaccatccctgtctcactgaaagTTTTATCTCTATAAGGTT
ATGGATTGATGACACAAATCTTGATTTATATTAgatttatttatattctt
tctttttcttcaggatgtagaaaaaatggatttcagatggttttggagtc
atttttttctggattttttatgtctgagctacagaaagtttaaaatatat
tgtgcaTTCTGGTGCATTGTGTATCAAAAAGACACCTTGTCTCGTTCTTC
TAAATCTGATGTCTAGTCCTTCTAGTTTAGATACATCCCCGTCCTATGAA
TGAgctataaaatatttcacaagaagaataaaattcatttctttcctttc
aatttttgcaagtttcttgatttttgaagttcattttgagacatttcgcc
tctttttcTTCCCCGCCTCCTTCttaaagaaaattcaattttttctacGC
CAATCAGATCTCACGTCTTTTTCCCGATCAGCCAATCACAATGGCTTGTA
GAGGGCATTGCGTAATTTtttgtctggtctgtaattttgatgttttctca
aatccaatgaattttctttagcagAGTAATGGGGCCCACTAAACCTGCAA
ATGCAGCGATTGTATTGGCTATCAAAAagccattttagattttcttgaaa
gccaGATAAATTGCGGACCGAACCGTGGGTCGGGGCTATTTTTTCATGGT
CCCTATCTCGAATAAACAGAGATCAAAGTCTGGACTTCGAAAATTCCTTC
GACAAAATaacttcctgaagaaaatatttaagccaTAAAATTAGCCCCGA
CCCTAGATCAGGTGCCCCTATGTGCAGGCCACCCTAAACAGTTGTTTTTG
ACCCTTAACTCTCGGCCGAGTCgttgctttttttgataaacagcaaTTTT
GGGACCTTACTTCAGTAGTCGTTTACTCGcggtttttgacagttttaaca
aaagagtttgccctaaacttcagttaaaaggttatattttcacaataaat
caattacacaatattctgaacttgtttatacgtttaaatttgagctcaat
actcttcattatgaaaatcgcaaaatttgataaattttacagaccagaaa
attcacctcattgaCACACTCGAGCTGTCTCGGGATTTTCGCAAGACAAG
GCTTTCCCAGAAAAGGACATTGCAACCTCTGTAAAACCAATgtcctttga
aaaattttggtgaCTATATTTTCATTGTGTTAGGGTAATATATTCTCGTT
AAAAATATTACGATATGGTAATTTAGATGTCTACATCACTTGCATAGAGA
ATTTTtatcgaaaagcttttgctcatttttaaaaataaactttccaaATG
GCAGAATTTCAAAGATAATCTAAATATTATCATTTACTTATCACAGGATG
ATTGGGATGATTTTAGGAGGACCATTTTGGGGATTGATCGCTGATAAATG
GCATTGTCACCGTATTGTGATTCTCTTGATGTGCATCACATCTCTATTGA
CCATCTCCACTCAACCTTTTGTTGGACTACATTTTGGAAACCCTGAAACC
AACAAATGTCCTTACGTTAAAGACACTACTTCAAGTAGTATCAACTTGTC
CTCGCAGGTGATAAATGCGTCAAATTACAGTATACTTACAACTGGAAACT
ACCTCCAAAACAATGCTCTCAGCGTATCAAATAGATCTAATGTCACGAAA
TCTCTTAAAACTTCACTGTATAAAAATCTTACAATAAACTCCCTGGACCA
AAACATTACTTTCTATTCATCAAACAATGCTCGATCACGAGTTATATCTC
AAAAACGAAACCCAATGAACAGAACTTCCAACTTAAATATACCAAGGAAG
GTATCAGAATCAAACCAAAACACAACCCAAAAAGATACCTACGCAAGTAC
TTTTGGGACTCTTTATTTCGCTATGTTTTCAATCAACTTTATCTTATCAT
TTGCTGAAGGGAGTGCAGTGGGCTTTGTAGACTCTGGAACAATGCGGCGT
AGCCAGTTAGCCACAACACGCCCAGTAGCTTACGGCCGACAACGAATGTT
TTCCAGCTTCGGTGGAGCATTTGGAATCCTGATCACCAACCTGGCAATCG
ATTATTTCCCAGCATCGAACATAACTTGCTATACTGGTATCTTTGTAGTC
TATGGTCTGTTCACTGTATGTTATTGTATCTCTACTATATCTCTATTCCA
AGGACTGTCTTTTTACAGCAAGCCTACAGACCTTGATACTGATTGTGAAG
ATCAACGTGAGCAGACAACAGACCAGAAAAGGCTGTTAGGAAGccaaaaa
tacgaaaagaaTGATATCAGCTTGAACAAATCTAGAAATAACTTGCGTAA
AACCTTGATCAGAACTCTGTCCCGACCGGAAACGATATTTTTCTACTTGA
CTACATTCGTGAGTGGACTTGAATATTCGCAATCAATGAATTTCTTATAC
CCATACCTCCGAGAAATGAACGCACCATCCATTCTCCTAACCCTTTCAGT
TGTGTTTTCAAACTTCGC Coding sequence (CDS) from alignment at sc0000076_pilon:9940..13857+ >MSTRG.10748.1.p1 ID=MSTRG.10748.1.p1|Name=MSTRG.10748.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2772bp|location=Sequence derived from alignment at sc0000076_pilon:9940..13857+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATCTGGATTGCAAtccaaagaaaatcaagaaggagacaaattgaa
agtagaacaagaaaatcgaaacaaaggaaaagaaactgaggaaaaacata
aaacatccaaacacaaaTGGTACCATGTTAATCCAAATGCAATCTCATCT
AAATGTGCTTATTTCTTTGAATGTGCCATGCGGAGTGGATTGCAACCAAA
TCTGGTGATGTTTTTCACCAGTATTGGTTTAAATAAAGCTGAAGCTGGAT
TCATTGTAGGTCTAAGGATGATTGGGATGATTTTAGGAGGACCATTTTGG
GGATTGATCGCTGATAAATGGCATTGTCACCGTATTGTGATTCTCTTGAT
GTGCATCACATCTCTATTGACCATCTCCACTCAACCTTTTGTTGGACTAC
ATTTTGGAAACCCTGAAACCAACAAATGTCCTTACGTTAAAGACACTACT
TCAAGTAGTATCAACTTGTCCTCGCAGGTGATAAATGCGTCAAATTACAG
TATACTTACAACTGGAAACTACCTCCAAAACAATGCTCTCAGCGTATCAA
ATAGATCTAATGTCACGAAATCTCTTAAAACTTCACTGTATAAAAATCTT
ACAATAAACTCCCTGGACCAAAACATTACTTTCTATTCATCAAACAATGC
TCGATCACGAGTTATATCTCAAAAACGAAACCCAATGAACAGAACTTCCA
ACTTAAATATACCAAGGAAGGTATCAGAATCAAACCAAAACACAACCCAA
AAAGATACCTACGCAAGTACTTTTGGGACTCTTTATTTCGCTATGTTTTC
AATCAACTTTATCTTATCATTTGCTGAAGGGAGTGCAGTGGGCTTTGTAG
ACTCTGGAACAATGCGGCGTAGCCAGTTAGCCACAACACGCCCAGTAGCT
TACGGCCGACAACGAATGTTTTCCAGCTTCGGTGGAGCATTTGGAATCCT
GATCACCAACCTGGCAATCGATTATTTCCCAGCATCGAACATAACTTGCT
ATACTGGTATCTTTGTAGTCTATGGTCTGTTCACTGTATGTTATTGTATC
TCTACTATATCTCTATTCCAAGGACTGTCTTTTTACAGCAAGCCTACAGA
CCTTGATACTGATTGTGAAGATCAACGTGAGCAGACAACAGACCAGAAAA
GGCTGTTAGGAAGccaaaaatacgaaaagaaTGATATCAGCTTGAACAAA
TCTAGAAATAACTTGCGTAAAACCTTGATCAGAACTCTGTCCCGACCGGA
AACGATATTTTTCTACTTGACTACATTCGTGAGTGGACTTGAATATTCGC
AATCAATGAATTTCTTATACCCATACCTCCGAGAAATGAACGCACCATCC
ATTCTCCTAACCCTTTCAGTTGTGTTTTCAAACTTCATGGCATCTGGATT
GCAAtccaaagaaaatcaagaaggagacaaattgaaagtagaacaagaaa
atcgaaacaaaggaaaagaaactgaggaaaaacataaaacatccaaacac
aaaTGGTACCATGTTAATCCAAATGCAATCTCATCTAAATGTGCTTATTT
CTTTGAATGTGCCATGCGGAGTGGATTGCAACCAAATCTGGTGATGTTTT
TCACCAGTATTGGTTTAAATAAAGCTGAAGCTGGATTCATTGTAGGTCTA
AGGATGATTGGGATGATTTTAGGAGGACCATTTTGGGGATTGATCGCTGA
TAAATGGCATTGTCACCGTATTGTGATTCTCTTGATGTGCATCACATCTC
TATTGACCATCTCCACTCAACCTTTTGTTGGACTACATTTTGGAAACCCT
GAAACCAACAAATGTCCTTACGTTAAAGACACTACTTCAAGTAGTATCAA
CTTGTCCTCGCAGGTGATAAATGCGTCAAATTACAGTATACTTACAACTG
GAAACTACCTCCAAAACAATGCTCTCAGCGTATCAAATAGATCTAATGTC
ACGAAATCTCTTAAAACTTCACTGTATAAAAATCTTACAATAAACTCCCT
GGACCAAAACATTACTTTCTATTCATCAAACAATGCTCGATCACGAGTTA
TATCTCAAAAACGAAACCCAATGAACAGAACTTCCAACTTAAATATACCA
AGGAAGGTATCAGAATCAAACCAAAACACAACCCAAAAAGATACCTACGC
AAGTACTTTTGGGACTCTTTATTTCGCTATGTTTTCAATCAACTTTATCT
TATCATTTGCTGAAGGGAGTGCAGTGGGCTTTGTAGACTCTGGAACAATG
CGGCGTAGCCAGTTAGCCACAACACGCCCAGTAGCTTACGGCCGACAACG
AATGTTTTCCAGCTTCGGTGGAGCATTTGGAATCCTGATCACCAACCTGG
CAATCGATTATTTCCCAGCATCGAACATAACTTGCTATACTGGTATCTTT
GTAGTCTATGGTCTGTTCACTGTATGTTATTGTATCTCTACTATATCTCT
ATTCCAAGGACTGTCTTTTTACAGCAAGCCTACAGACCTTGATACTGATT
GTGAAGATCAACGTGAGCAGACAACAGACCAGAAAAGGCTGTTAGGAAGc
caaaaatacgaaaagaaTGATATCAGCTTGAACAAATCTAGAAATAACTT
GCGTAAAACCTTGATCAGAACTCTGTCCCGACCGGAAACGATATTTTTCT
ACTTGACTACATTCGTGAGTGGACTTGAATATTCGCAATCAATGAATTTC
TTATACCCATACCTCCGAGAAATGAACGCACCATCCATTCTCCTAACCCT
TTCAGTTGTGTTTTCAAACTTC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000076_pilon | genome | sc0000076_pilon:9940..13857 + |
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