MSTRG.10747.2.p1 (mRNA) -

Overview
NameMSTRG.10747.2.p1
Unique NameMSTRG.10747.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000076_pilon:4804..6353+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10747.2.p1 ID=MSTRG.10747.2.p1|Name=MSTRG.10747.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1550bp|location=Sequence derived from alignment at sc0000076_pilon:4804..6353+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAAAAGTTGAATTCTGAtgagatttagaacgccatgctcACGACGTTTT
TTCAACGTCAATCTGACAATATTTGGACGTTAGGGACGTTAGAGAAACGT
TGTTATGATGAGAAAAGatttggacgtttttgagacccttttagagaatt
tttgtgaaaattttgtacgatttttccgttttCTATAAGGTTAAAATTCA
GGTTTAGAGCTTTATGAACTAGATCTAAAACGATAACTAAGATTTCTCGT
GAACCTAAAAATGTCTACTAGTAATGCTCAATTTGAGGTGTCCATTGTTA
TACCAACGTATCACAAGTGAGACACTTCCTGGCCCGGCGGGGGgaactcg
attcaaaaacgaaccGTATGagtctagcctttcgggcttggaagtcaatg
attCAACCCCACTAAGTGAAGTGGGTTCCGTCGGGGTACTAAAGCAAACC
atttattcaatatattttatatatttctttCATAGGTCGAATATTGTCGA
GGTAGTACGTTACGGAACGACCAATGTGGTGGTCGAATCCCGAATCGGAC
TTTCGATTCCGTTTCCAAGAACAACAAAGATGCTTTGAACTTACAATATA
TACCGAACAAAAACGCCACAATCTCCAGCACATCATCAAGTGTTAACGGT
AGTACAAGCCAGCTTATGACTCAAACCAGCGCTTATAGTCAATACAGTGT
TGATTCTATTATATTGGATATAGAAGAGAATGTTAGGCGTGTGGGTGCGA
AACGTGATCACAGAGGTTCTAAACGTGATCACGGAGGCTCCAAACGTGAC
TTACATCACGCACGACTACAAGATAACCGGCTTCCGTCAATGAATTCTGA
AGTTTTCTTATCAGAAACTATTGGTGAGGTCACGtggtttttgaaaatct
attGGATGCTTTCATCCAGTGTGCTGACGTTAGCATTTTTAACTGTCCTT
GTTTACTGGACCCTATTGTTTGATTCGAACCAATCATCGCACGCTCTACA
ATGGTACTTGCGCTGTGATCGTCACGGTCTTGCATTCTTATTGGTTCTCG
TTGATCACATGATTAGCCGGACACCAATCAGATTGCTGCATTTTATATAT
CCATCCATACTGATGCTTTTGTACGGAGCATGTAATGGAGTTTATTGTTA
CGCAACTAAGAGGGTTGTTTATTCGAAAATGGATTTTTTAGAACAGCCGC
TAATCGCTGTTGGACTTGTGTTATTATGTGCACTAGTCGCGTCTCCAGTT
GGACAacttattttgtattttgtggTATACAGGCTAAAGGAGAAATGTCT
GGCATCCTACTGAATACTTTATGGTTGAGGTTTAAAGGCTAGTTATACAG
CTGGAACAAAGCCTTTTATGGATGTTGTATGGACATTAAATGAACGTTGT
GTCAGCTCATGAAGCAACACCTTCTAACTTCctaattttttcagccagtc
gGGGTAGAAAATTAATGAACTCGAAGAGGATTgatattccaaaatttttt
atggctggggatttaagtTTCATCGTTTTAATGTGAGAACAATCAGTTGG

Coding sequence (CDS) from alignment at sc0000076_pilon:4804..6353+

>MSTRG.10747.2.p1 ID=MSTRG.10747.2.p1|Name=MSTRG.10747.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=648bp|location=Sequence derived from alignment at sc0000076_pilon:4804..6353+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTCAAACCAGCGCTTATAGTCAATACAGTGTTGATTCTATTATATT
GGATATAGAAGAGAATGTTAGGCGTGTGGGTGCGAAACGTGATCACAGAG
GTTCTAAACGTGATCACGGAGGCTCCAAACGTGACTTACATCACGCACGA
CTACAAGATAACCGGCTTCCGTCAATGAATTCTGAAGTTTTCTTATCAGA
AACTATTGGTGAGGTCACGtggtttttgaaaatctattGGATGCTTTCAT
CCAGTGTGCTGACGTTAGCATTTTTAACTGTCCTTGTTTACTGGACCCTA
TTGTTTGATTCGAACCAATCATCGCACGCTCTACAATGGTACTTGCGCTG
TGATCGTCACGGTCTTGCATTCTTATTGGTTCTCGTTGATCACATGATTA
GCCGGACACCAATCAGATTGCTGCATTTTATATATCCATCCATACTGATG
CTTTTGTACGGAGCATGTAATGGAGTTTATTGTTACGCAACTAAGAGGGT
TGTTTATTCGAAAATGGATTTTTTAGAACAGCCGCTAATCGCTGTTGGAC
TTGTGTTATTATGTGCACTAGTCGCGTCTCCAGTTGGACAacttattttg
tattttgtggTATACAGGCTAAAGGAGAAATGTCTGGCATCCTACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10747MSTRG.10747Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10747.2.p1MSTRG.10747.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10747.2.p1.exon1MSTRG.10747.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10747.2.p1.exon2MSTRG.10747.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000076_pilongenomesc0000076_pilon:4804..6353 +