MSTRG.10731.2.p1 (mRNA) -

Overview
NameMSTRG.10731.2.p1
Unique NameMSTRG.10731.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000075_pilon:1240745..1244910-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10731.2.p1 ID=MSTRG.10731.2.p1|Name=MSTRG.10731.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4166bp|location=Sequence derived from alignment at sc0000075_pilon:1240745..1244910- (Clytia hemisphaerica_ch_hm2_pilon)
ATTATATTCTTACCGAGGAAAAAAAGAAAATTAACATTACATAAAACGAT
AAAAGTACAATCAAGAAATATTAAAGGACATGACTGAAACTCGCGAGTCT
ATGGAAAAGACTGGCTGTGAATTTAATTTGTTGCTAGCAGCAACTGGGAG
CGTGGCAACCATCAAGATACCCTTATTGGTCAAAAAGTTGAAAGAAAAAT
TTGGAAAGGTATTCATAGTTCTTCAAAGTTTTTCTTCCGTTATTCAGCGT
GTCTGGAAAAAGTAAAAGTGAAAATTTACGGGAAAAGTTTCTCAGCTTCG
ATTCGTCAAATATCCTTCAAGCTCGACTGAATATTTTTCGATATCCGATT
TTTCTTGTCGAATATCTGCTTATTATTCTCAGCTCCAGTAACGTAATGGG
TAATGTTTTGGACAAACTGTGAGTGTGAATTTTTGTGTGGAATAGTTAGT
TTTCATATTTTCCTACCCATAGATTTCCATCAAATTGATTTTGACAAAGA
ATGCGGAATTTTTCGTTAAACCAGAAGAAAAGGAGGACATGGAATCGTTG
TGTGGTTGTCAAATCTACAGAGATAAAGATGAATGGAGTGTAAGTAGACG
GGGGGTGGCACTTACGTTAAAGATAAGTTTGCGTTTTTCAGCCTTCCAAG
AGTACACTCCAAATGTGTAAGAGGTGAGGAAAACGACTTTTTTAGAGCAA
AATTTTGGAAATCTAACTTTTCTTGCCTTAAAATAGAAAAGGAAATGTCA
AGAAAATACATCGTAAGGATAGATTTTTCGCATAAATTTACTCAACTTTT
TGGCAAAATTTTCTCAGCCACTAACCTAATTTTGGGCCGCACGTACGGTC
GTTTTTTAATCAAGTGCCCCTTGTGGACGTTGTAATCGTCCGGTACAGGG
GTAGTAATAGACTGGAGTCGTTTATAATCCGATTGATACAGTATTATGGG
TGTTATATGATAATACGATAATTGATAAAGGATAATATTATATTTTTTCA
TGTTTTCATTTTCATTGTTTATTTTCTACTATGCCGAATTATTAGAATGA
TTACGCCCTATTCCAACGGGAAAAGACACTATGATTCTCTCCGCTGGATA
CACGCTTTTTTTTAAGAATACCCTAAGAATACCCTCTAGGGTGAATTTCA
CAGAATTTGATAAGAATATAGTCATTTTGTATTTGGTTAACAGAAAAAAC
TGTTTCCTTTGTTACAGATAAATTGAAGCTTTGAGGAAGAAATGTAATTT
TAACCTAAATGTTCACTCAATAGTCCAAAACTCTCAAATTGATCATTTCT
CATGTTTGTAAAAAAAGTCGAGTCTAAAAAAGTAATAATACGTTATAATA
CGAAATATAATAAGAAATTCCAGCCATTTAGTCAAGCATGTGATTTTCCA
TCCCCATTGGCATTAGGGTTCTCGATTTTATCTATACAGAGTATAAAAGT
TTTAAGGGTCATTAACACAGGGTTGTTTCATTACTTTTTAATGTTTTTCT
TTGTACAATGTATAGCAATGTGCCCTCCCGGTTATTACCATAATGGCTTT
TTGGCAACTCCTGAACTTGGGCACAGGATGTACGGTTTTATGTTTTTCTT
TGTATATAGAACTGGAAGAAAATAGGAGATCCGATTCTTCACATAGATGT
AAGTACTATTAGATCAGTATAAATTTGGAAATGTTGTTTTATCAAATTGG
GGGCGTACGAGGATGGTATCCCACCCAATAACGCCTACTAAAAAATAAAT
CCCAAAATAGAATTGAATAGAAGTATAAGACTTCTATAGAGTACCTTATA
AATAAGGGATCGGTATGCCCGGACATCAGGGTGTCGAATAAGAAGGTCTC
TCGGTAGAAAAACTAGAAACATGAGGCTAATTTCAGTGTTAAAATCCTTC
CGTCTCAAACGGATTTCTGTCTCAGTGGAGTAATGAAGAAGCTACATCTC
AAAATTCTGCCTTCTTTACCAAAATTTTCAAGAATACACGTGCTATTTTG
CTCCATTTTCTGGCTCAAACATACTCTTGCTATAACCACTGGAACATAGA
AGGCTTTTGAAAAAACGAAAATATGAAGAAAGAAATGCTTATTACAGTAG
GTATTCATGATATGCACCATTGCAATGTCTTCTGACATTACATCACGGAC
CCAACAGCTGATTGGTTTTAAGTGACGTAAAATCAGTCAATACGTCACTT
TCAAGGGCCTTTCAACCAATCAGCTGTTTGGTCCGTGGAAGGCATTGCAA
TAGCGCATTTCATGAATACTGGAGAGGAATGATCTTCAGTGCTTGATTTT
ACTTTCTTTCTTGAAATTACACATCATTTCTCTTTATTTTTTTACAGTTG
ATGAAATGGGCTGATGTGCTCTGCATTGCACCATTAGACGCCAATACTAT
GGCCAAGTTATCGAACGGGATTTGCGATAACATGCTAGTAGGTCTTCTAA
GTTTCAGAAGAAAAAAACCGGCAATCAATTTTGGGCACTTTTGGGACATT
TTATGATGACGTCAATTAAGTGATTTCATTCCTTTGATATACGATTTAAG
TAATAAGAGGCTCAAGCTGAAATATAAAAATGACTATGAATAAAATGAAG
TAGTGTTGGAAAATAGGTAGGAACGTAATTTGATTTTAATCGAAACCTTT
ATTTGGAAGTAAACCTTTTAGTTAGTTGACGAAGTCATTTATTAGCGCAC
CATATACAGCGTGTCCCAAAAAAGCGGACAAACTTTTATATAAAGTAAAA
TCCTCGTAAATTTATGCAAAATTTTTTGACTTGAATACTGAATAACTTAA
ATATCTGTTGTTGATTAAGTAGAGAATTTTGATCTTATTTCAATTATTCT
AAACCCAGTTCGGATAATGAGTTTTGAGGATTTACTTTATATAAATATTT
GTCTGATTTTTTTTGAGACACAATGAATGTTTTATAGTGCTCACTATGCC
ATGCATGGGATTTCAAAAAACCAATACTAATTGCGCCCGCTATGAACACC
CTGATGTGGAGCCACCCTTTGACGTCATTACATGTCCAAACCTTGTTGTC
ATGGGGATATAAAATGATAGCACCGATTTCCAAGAAGCTTGCATGTGGAG
ATACAGGTATATAAAAATTACTTTCGTCGAGCTGCATCAATTTATCCTCC
TTTTTCACAAAACAGAAGACGACACTCTCTAATTCGATTTTCATAAAGGA
GTGTACAGAATATGTAGTAGAGCTTTTTGTTGACGGTATCTTTCAATATT
ATCGAATAATAGAGTCCACCGAATAATAGAACGTCGAATGGGCTCTTCCA
GAACGCTTTTGTACATGAGGTGGAGGATATATTGAATATTTTGTCCGGGG
GCCGGGTTGTGAAAAATCTGCACGATTTGCCTTGTTTTGGGGCAAACTTA
TTCTGCTTAAGGTAGTTTTGAATGTCCGGGGGTCAACTGATGCTTGTCTT
GGGGTGAGAACTGTTGTCCGGGGGTCATAATTCACAATGTCCGCGGGGTA
AATTTCCAAAACAATGTTATATCCTCTAACCTCCGTATTCATGTTTTTTG
GGAGAGCGTCAACCGTATAGGGGTCCTCCCTATTGATAATTAGTAAATGA
ATGATTAGGGTTAGAAATGTTTGGAAAGCCCATCATTAGGTAGAATTCGG
TATAGTCCACGAAAAGGCGGACAAACTTTTGTAAAAAGTAAAATGCGAAT
TTTATCACAAAAACCAATTCAATCTCCTTGGAAATTGAATATCTGTTAAT
TGAACATAGAAACAAAATTGATATTTTCATTTTAGGCGTTGGTGCGATGG
CTGAGGTAGATGAAATCATAAATTCGATTGAACTGTCGATGACGTAATGA
TTATTCCGATTAAACCAATCTGTGATATTTTGGATTGTGCAACAATTTTA
AACTCGATGTCGAGCTAACGTTACGAGTTCGATCGCGGGCTTTCGATGGC
ATAGAGCAAGTATTATACCGCATGTTTCAAGTGTGGAGATAAATAACTGG
ATAAGCTAATGTGACATTTATTTAACAGATTCAAGCGTAGTTTTTAATTT
TCAATTCAATCTTACAGTTCTAACAGTGTTTTCTAGGTTTAGCGGGCTAC
AACAATTTTCTATCGCAATCTACTGAGAGAAAGAATCTTATTTATATCTG
GATCGAAAATAACAAT

Coding sequence (CDS) from alignment at sc0000075_pilon:1240745..1244910-

>MSTRG.10731.2.p1 ID=MSTRG.10731.2.p1|Name=MSTRG.10731.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3636bp|location=Sequence derived from alignment at sc0000075_pilon:1240745..1244910- (Clytia hemisphaerica_ch_hm2_pilon)
GCGTTGGTGCGATGGCTGAGGTAGATGAAATCATAAATTCGATTGAACTG
TCGATGACGTAATGCTCACTATGCCATGCATGGGATTTCAAAAAACCAAT
ACTAATTGCGCCCGCTATGAACACCCTGATGTGGAGCCACCCTTTGACGT
CATTACATGTCCAAACCTTGTTGTCATGGGGATATAAAATGATAGCACCG
ATTTCCAAGAAGCTTGCATGTGGAGATACAGTTGATGAAATGGGCTGATG
TGCTCTGCATTGCACCATTAGACGCCAATACTATGGCCAAGTTATCGAAC
GGGATTTGCGATAACATGCTAAACTGGAAGAAAATAGGAGATCCGATTCT
TCACATAGATATTTCCATCAAATTGATTTTGACAAAGAATGCGGAATTTT
TCGTTAAACCAGAAGAAAAGGAGGACATGGAATCGTTGTGTGGTTGTCAA
ATCTACAGAGATAAAGATGAATGGAGTATGACTGAAACTCGCGAGTCTAT
GGAAAAGACTGGCTGTGAATTTAATTTGTTGCTAGCAGCAACTGGGAGCG
TGGCAACCATCAAGATACCCTTATTGGTCAAAAAGTTGAAAGAAAAATTT
GGAAAGGCGTTGGTGCGATGGCTGAGGTAGATGAAATCATAAATTCGATT
GAACTGTCGATGACGTAATGCTCACTATGCCATGCATGGGATTTCAAAAA
ACCAATACTAATTGCGCCCGCTATGAACACCCTGATGTGGAGCCACCCTT
TGACGTCATTACATGTCCAAACCTTGTTGTCATGGGGATATAAAATGATA
GCACCGATTTCCAAGAAGCTTGCATGTGGAGATACAGTTGATGAAATGGG
CTGATGTGCTCTGCATTGCACCATTAGACGCCAATACTATGGCCAAGTTA
TCGAACGGGATTTGCGATAACATGCTAAACTGGAAGAAAATAGGAGATCC
GATTCTTCACATAGATATTTCCATCAAATTGATTTTGACAAAGAATGCGG
AATTTTTCGTTAAACCAGAAGAAAAGGAGGACATGGAATCGTTGTGTGGT
TGTCAAATCTACAGAGATAAAGATGAATGGAGTATGACTGAAACTCGCGA
GTCTATGGAAAAGACTGGCTGTGAATTTAATTTGTTGCTAGCAGCAACTG
GGAGCGTGGCAACCATCAAGATACCCTTATTGGTCAAAAAGTTGAAAGAA
AAATTTGGAAAGGCGTTGGTGCGATGGCTGAGGTAGATGAAATCATAAAT
TCGATTGAACTGTCGATGACGTAATGCTCACTATGCCATGCATGGGATTT
CAAAAAACCAATACTAATTGCGCCCGCTATGAACACCCTGATGTGGAGCC
ACCCTTTGACGTCATTACATGTCCAAACCTTGTTGTCATGGGGATATAAA
ATGATAGCACCGATTTCCAAGAAGCTTGCATGTGGAGATACAGTTGATGA
AATGGGCTGATGTGCTCTGCATTGCACCATTAGACGCCAATACTATGGCC
AAGTTATCGAACGGGATTTGCGATAACATGCTAAACTGGAAGAAAATAGG
AGATCCGATTCTTCACATAGATATTTCCATCAAATTGATTTTGACAAAGA
ATGCGGAATTTTTCGTTAAACCAGAAGAAAAGGAGGACATGGAATCGTTG
TGTGGTTGTCAAATCTACAGAGATAAAGATGAATGGAGTATGACTGAAAC
TCGCGAGTCTATGGAAAAGACTGGCTGTGAATTTAATTTGTTGCTAGCAG
CAACTGGGAGCGTGGCAACCATCAAGATACCCTTATTGGTCAAAAAGTTG
AAAGAAAAATTTGGAAAGGCGTTGGTGCGATGGCTGAGGTAGATGAAATC
ATAAATTCGATTGAACTGTCGATGACGTAATGCTCACTATGCCATGCATG
GGATTTCAAAAAACCAATACTAATTGCGCCCGCTATGAACACCCTGATGT
GGAGCCACCCTTTGACGTCATTACATGTCCAAACCTTGTTGTCATGGGGA
TATAAAATGATAGCACCGATTTCCAAGAAGCTTGCATGTGGAGATACAGT
TGATGAAATGGGCTGATGTGCTCTGCATTGCACCATTAGACGCCAATACT
ATGGCCAAGTTATCGAACGGGATTTGCGATAACATGCTAAACTGGAAGAA
AATAGGAGATCCGATTCTTCACATAGATATTTCCATCAAATTGATTTTGA
CAAAGAATGCGGAATTTTTCGTTAAACCAGAAGAAAAGGAGGACATGGAA
TCGTTGTGTGGTTGTCAAATCTACAGAGATAAAGATGAATGGAGTATGAC
TGAAACTCGCGAGTCTATGGAAAAGACTGGCTGTGAATTTAATTTGTTGC
TAGCAGCAACTGGGAGCGTGGCAACCATCAAGATACCCTTATTGGTCAAA
AAGTTGAAAGAAAAATTTGGAAAGGCGTTGGTGCGATGGCTGAGGTAGAT
GAAATCATAAATTCGATTGAACTGTCGATGACGTAATGCTCACTATGCCA
TGCATGGGATTTCAAAAAACCAATACTAATTGCGCCCGCTATGAACACCC
TGATGTGGAGCCACCCTTTGACGTCATTACATGTCCAAACCTTGTTGTCA
TGGGGATATAAAATGATAGCACCGATTTCCAAGAAGCTTGCATGTGGAGA
TACAGTTGATGAAATGGGCTGATGTGCTCTGCATTGCACCATTAGACGCC
AATACTATGGCCAAGTTATCGAACGGGATTTGCGATAACATGCTAAACTG
GAAGAAAATAGGAGATCCGATTCTTCACATAGATATTTCCATCAAATTGA
TTTTGACAAAGAATGCGGAATTTTTCGTTAAACCAGAAGAAAAGGAGGAC
ATGGAATCGTTGTGTGGTTGTCAAATCTACAGAGATAAAGATGAATGGAG
TATGACTGAAACTCGCGAGTCTATGGAAAAGACTGGCTGTGAATTTAATT
TGTTGCTAGCAGCAACTGGGAGCGTGGCAACCATCAAGATACCCTTATTG
GTCAAAAAGTTGAAAGAAAAATTTGGAAAGGCGTTGGTGCGATGGCTGAG
GTAGATGAAATCATAAATTCGATTGAACTGTCGATGACGTAATGCTCACT
ATGCCATGCATGGGATTTCAAAAAACCAATACTAATTGCGCCCGCTATGA
ACACCCTGATGTGGAGCCACCCTTTGACGTCATTACATGTCCAAACCTTG
TTGTCATGGGGATATAAAATGATAGCACCGATTTCCAAGAAGCTTGCATG
TGGAGATACAGTTGATGAAATGGGCTGATGTGCTCTGCATTGCACCATTA
GACGCCAATACTATGGCCAAGTTATCGAACGGGATTTGCGATAACATGCT
AAACTGGAAGAAAATAGGAGATCCGATTCTTCACATAGATATTTCCATCA
AATTGATTTTGACAAAGAATGCGGAATTTTTCGTTAAACCAGAAGAAAAG
GAGGACATGGAATCGTTGTGTGGTTGTCAAATCTACAGAGATAAAGATGA
ATGGAGTATGACTGAAACTCGCGAGTCTATGGAAAAGACTGGCTGTGAAT
TTAATTTGTTGCTAGCAGCAACTGGGAGCGTGGCAACCATCAAGATACCC
TTATTGGTCAAAAAGTTGAAAGAAAAATTTGGAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10731MSTRG.10731Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10731.2.p1MSTRG.10731.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10731.2.p1.exon6MSTRG.10731.2.p1.exon6Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10731.2.p1.exon5MSTRG.10731.2.p1.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10731.2.p1.exon4MSTRG.10731.2.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10731.2.p1.exon3MSTRG.10731.2.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10731.2.p1.exon2MSTRG.10731.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10731.2.p1.exon1MSTRG.10731.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000075_pilongenomesc0000075_pilon:1240745..1244910 -