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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000075_pilon:1240741..1244910- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10731.1.p1 ID=MSTRG.10731.1.p1|Name=MSTRG.10731.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4170bp|location=Sequence derived from alignment at sc0000075_pilon:1240741..1244910- (Clytia hemisphaerica_ch_hm2_pilon)
ATTATATTCTTACCGAGGAAAAAAAGAAAATTAACATTACATAAAACGAT
AAAAGTACAATCAAGAAATATTAAAGGACATGACTGAAACTCGCGAGTCT
ATGGAAAAGACTGGCTGTGAATTTAATTTGTTGCTAGCAGCAACTGGGAG
CGTGGCAACCATCAAGATACCCTTATTGGTCAAAAAGTTGAAAGAAAAAT
TTGGAAAGGTATTCATAGTTCTTCAAAGTTTTTCTTCCGTTATTCAGCGT
GTCTGGAAAAAGTAAAAGTGAAAATTTACGGGAAAAGTTTCTCAGCTTCG
ATTCGTCAAATATCCTTCAAGCTCGACTGAATATTTTTCGATATCCGATT
TTTCTTGTCGAATATCTGCTTATTATTCTCAGCTCCAGTAACGTAATGGG
TAATGTTTTGGACAAACTGTGAGTGTGAATTTTTGTGTGGAATAGTTAGT
TTTCATATTTTCCTACCCATAGATTTCCATCAAATTGATTTTGACAAAGA
ATGCGGAATTTTTCGTTAAACCAGAAGAAAAGGAGGACATGGAATCGTTG
TGTGGTTGTCAAATCTACAGAGATAAAGATGAATGGAGTGTAAGTAGACG
GGGGGTGGCACTTACGTTAAAGATAAGTTTGCGTTTTTCAGCCTTCCAAG
AGTACACTCCAAATGTGTAAGAGGTGAGGAAAACGACTTTTTTAGAGCAA
AATTTTGGAAATCTAACTTTTCTTGCCTTAAAATAGAAAAGGAAATGTCA
AGAAAATACATCGTAAGGATAGATTTTTCGCATAAATTTACTCAACTTTT
TGGCAAAATTTTCTCAGCCACTAACCTAATTTTGGGCCGCACGTACGGTC
GTTTTTTAATCAAGTGCCCCTTGTGGACGTTGTAATCGTCCGGTACAGGG
GTAGTAATAGACTGGAGTCGTTTATAATCCGATTGATACAGTATTATGGG
TGTTATATGATAATACGATAATTGATAAAGGATAATATTATATTTTTTCA
TGTTTTCATTTTCATTGTTTATTTTCTACTATGCCGAATTATTAGAATGA
TTACGCCCTATTCCAACGGGAAAAGACACTATGATTCTCTCCGCTGGATA
CACGCTTTTTTTTAAGAATACCCTAAGAATACCCTCTAGGGTGAATTTCA
CAGAATTTGATAAGAATATAGTCATTTTGTATTTGGTTAACAGAAAAAAC
TGTTTCCTTTGTTACAGATAAATTGAAGCTTTGAGGAAGAAATGTAATTT
TAACCTAAATGTTCACTCAATAGTCCAAAACTCTCAAATTGATCATTTCT
CATGTTTGTAAAAAAAGTCGAGTCTAAAAAAGTAATAATACGTTATAATA
CGAAATATAATAAGAAATTCCAGCCATTTAGTCAAGCATGTGATTTTCCA
TCCCCATTGGCATTAGGGTTCTCGATTTTATCTATACAGAGTATAAAAGT
TTTAAGGGTCATTAACACAGGGTTGTTTCATTACTTTTTAATGTTTTTCT
TTGTACAATGTATAGCAATGTGCCCTCCCGGTTATTACCATAATGGCTTT
TTGGCAACTCCTGAACTTGGGCACAGGATGTACGGTTTTATGTTTTTCTT
TGTATATAGAACTGGAAGAAAATAGGAGATCCGATTCTTCACATAGATGT
AAGTACTATTAGATCAGTATAAATTTGGAAATGTTGTTTTATCAAATTGG
GGGCGTACGAGGATGGTATCCCACCCAATAACGCCTACTAAAAAATAAAT
CCCAAAATAGAATTGAATAGAAGTATAAGACTTCTATAGAGTACCTTATA
AATAAGGGATCGGTATGCCCGGACATCAGGGTGTCGAATAAGAAGGTCTC
TCGGTAGAAAAACTAGAAACATGAGGCTAATTTCAGTGTTAAAATCCTTC
CGTCTCAAACGGATTTCTGTCTCAGTGGAGTAATGAAGAAGCTACATCTC
AAAATTCTGCCTTCTTTACCAAAATTTTCAAGAATACACGTGCTATTTTG
CTCCATTTTCTGGCTCAAACATACTCTTGCTATAACCACTGGAACATAGA
AGGCTTTTGAAAAAACGAAAATATGAAGAAAGAAATGCTTATTACAGTAG
GTATTCATGATATGCACCATTGCAATGTCTTCTGACATTACATCACGGAC
CCAACAGCTGATTGGTTTTAAGTGACGTAAAATCAGTCAATACGTCACTT
TCAAGGGCCTTTCAACCAATCAGCTGTTTGGTCCGTGGAAGGCATTGCAA
TAGCGCATTTCATGAATACTGGAGAGGAATGATCTTCAGTGCTTGATTTT
ACTTTCTTTCTTGAAATTACACATCATTTCTCTTTATTTTTTTACAGTTG
ATGAAATGGGCTGATGTGCTCTGCATTGCACCATTAGACGCCAATACTAT
GGCCAAGTTATCGAACGGGATTTGCGATAACATGCTAGTAGGTCTTCTAA
GTTTCAGAAGAAAAAAACCGGCAATCAATTTTGGGCACTTTTGGGACATT
TTATGATGACGTCAATTAAGTGATTTCATTCCTTTGATATACGATTTAAG
TAATAAGAGGCTCAAGCTGAAATATAAAAATGACTATGAATAAAATGAAG
TAGTGTTGGAAAATAGGTAGGAACGTAATTTGATTTTAATCGAAACCTTT
ATTTGGAAGTAAACCTTTTAGTTAGTTGACGAAGTCATTTATTAGCGCAC
CATATACAGCGTGTCCCAAAAAAGCGGACAAACTTTTATATAAAGTAAAA
TCCTCGTAAATTTATGCAAAATTTTTTGACTTGAATACTGAATAACTTAA
ATATCTGTTGTTGATTAAGTAGAGAATTTTGATCTTATTTCAATTATTCT
AAACCCAGTTCGGATAATGAGTTTTGAGGATTTACTTTATATAAATATTT
GTCTGATTTTTTTTGAGACACAATGAATGTTTTATAGTGCTCACTATGCC
ATGCATGGGATTTCAAAAAACCAATACTAATTGCGCCCGCTATGAACACC
CTGATGTGGAGCCACCCTTTGACGTCATTACATGTCCAAACCTTGTTGTC
ATGGGGATATAAAATGATAGCACCGATTTCCAAGAAGCTTGCATGTGGAG
ATACAGGTATATAAAAATTACTTTCGTCGAGCTGCATCAATTTATCCTCC
TTTTTCACAAAACAGAAGACGACACTCTCTAATTCGATTTTCATAAAGGA
GTGTACAGAATATGTAGTAGAGCTTTTTGTTGACGGTATCTTTCAATATT
ATCGAATAATAGAGTCCACCGAATAATAGAACGTCGAATGGGCTCTTCCA
GAACGCTTTTGTACATGAGGTGGAGGATATATTGAATATTTTGTCCGGGG
GCCGGGTTGTGAAAAATCTGCACGATTTGCCTTGTTTTGGGGCAAACTTA
TTCTGCTTAAGGTAGTTTTGAATGTCCGGGGGTCAACTGATGCTTGTCTT
GGGGTGAGAACTGTTGTCCGGGGGTCATAATTCACAATGTCCGCGGGGTA
AATTTCCAAAACAATGTTATATCCTCTAACCTCCGTATTCATGTTTTTTG
GGAGAGCGTCAACCGTATAGGGGTCCTCCCTATTGATAATTAGTAAATGA
ATGATTAGGGTTAGAAATGTTTGGAAAGCCCATCATTAGGTAGAATTCGG
TATAGTCCACGAAAAGGCGGACAAACTTTTGTAAAAAGTAAAATGCGAAT
TTTATCACAAAAACCAATTCAATCTCCTTGGAAATTGAATATCTGTTAAT
TGAACATAGAAACAAAATTGATATTTTCATTTTAGGCGTTGGTGCGATGG
CTGAGGTAGATGAAATCATAAATTCGATTGAACTGTCGATGACGTAATGA
TTATTCCGATTAAACCAATCTGTGATATTTTGGATTGTGCAACAATTTTA
AACTCGATGTCGAGCTAACGTTACGAGTTCGATCGCGGGCTTTCGATGGC
ATAGAGCAAGTATTATACCGCATGTTTCAAGTGTGGAGATAAATAACTGG
ATAAGCTAATGTGACATTTATTTAACAGATTCAAGCGTAGTTTTTAATTT
TCAATTCAATCTTACAGTTCTAACAGTGTTTTCTAGGTTTAGCGGGCTAC
AACAATTTTCTATCGCAATCTACTGAGAGAAAGAATCTTATTTATATCTG
GATCGAAAATAACAATAGAC Coding sequence (CDS) from alignment at sc0000075_pilon:1240741..1244910- >MSTRG.10731.1.p1 ID=MSTRG.10731.1.p1|Name=MSTRG.10731.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=654bp|location=Sequence derived from alignment at sc0000075_pilon:1240741..1244910- (Clytia hemisphaerica_ch_hm2_pilon)
ATTTCCATCAAATTGATTTTGACAAAGAATGCGGAATTTTTCGTTAAACC
AGAAGAAAAGGAGGACATGGAATCGTTGTGTGGTTGTCAAATCTACAGAG
ATAAAGATGAATGGAGTGTAAGTAGACGGGGGGTGGCACTTACGTTAAAG
ATAAGTTTGCGTTTTTCAGCCTTCCAAGAGTACACTCCAAATGTGTAAAT
GACTGAAACTCGCGAGTCTATGGAAAAGACTGGCTGTGAATTTAATTTGT
TGCTAGCAGCAACTGGGAGCGTGGCAACCATCAAGATACCCTTATTGGTC
AAAAAGTTGAAAGAAAAATTTGGAAAGATTTCCATCAAATTGATTTTGAC
AAAGAATGCGGAATTTTTCGTTAAACCAGAAGAAAAGGAGGACATGGAAT
CGTTGTGTGGTTGTCAAATCTACAGAGATAAAGATGAATGGAGTGTAAGT
AGACGGGGGGTGGCACTTACGTTAAAGATAAGTTTGCGTTTTTCAGCCTT
CCAAGAGTACACTCCAAATGTGTAAATGACTGAAACTCGCGAGTCTATGG
AAAAGACTGGCTGTGAATTTAATTTGTTGCTAGCAGCAACTGGGAGCGTG
GCAACCATCAAGATACCCTTATTGGTCAAAAAGTTGAAAGAAAAATTTGG
AAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000075_pilon | genome | sc0000075_pilon:1240741..1244910 - |
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