MSTRG.10724.1.p1 (mRNA) -

Overview
NameMSTRG.10724.1.p1
Unique NameMSTRG.10724.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000075_pilon:1121735..1123611+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10724.1.p1 ID=MSTRG.10724.1.p1|Name=MSTRG.10724.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1877bp|location=Sequence derived from alignment at sc0000075_pilon:1121735..1123611+ (Clytia hemisphaerica_ch_hm2_pilon)
aaaaaattcaaaatgaaaccAATGATCCTCTTGGTCACAATCTTACCGTT
CCTACATGGTTTGATGAAAGATAACAATACTGGTGAAGCTTGGGGATATG
TTGATGTCCGAGAAGGTGCTCATATCTTCTGGTGGTTGTACGGTCAATCT
GCAAACACACCAAAGAATCCTACAAGACCACTGGTCATGTGGCTACAAGG
TGGTCCTGGTGCGTCATCAACAGGTAAAAGATTATGAAGAAATCTCTGTT
TCAAGTTTCAAGAAGACAcaccaaaacgtcaaaaaaatttctctcagggt
cggaaatttgaaatgtgaaaggccttttttaccaaaaaataagtCCCTTC
GTGGCGCCAATTCTTGAGTAGAGAATaggatttgttttttatttgaatgt
cGATATTTTGATCAATAGATAATGTAATTTTTCTGTTAAACCCTCATTAC
CCATTTTTATAGTTCTTTCGTTGCACCTTAATACAATAAAACTTTTAGTA
CTTCTTCTTAAAGTGATTTTAAATGATTAATCCAAATAAGGGCCAATCAA
TTCACCAATATACCTTCTATTCCTAGTGTTGGTAAAGCCGTTtatacatc
ttttcgaccgtagccgccaattgctccagtccttttttcgcacatataga
caatagaaaaatgtgtcaaaaaaggattggatcgagtttagggggataat
taaataattaagtggcacgcgcctgactgcACGACTAcagtcaaaaaggt
gtattacttCCCAACAAATATCTTATACAATTTCTATTACTTATACTTTT
TAGGATTCGGTAATTTAGCAGAAGTTGGCCCTCTTGATGAGAACCTATCA
CCTCGATCAGGACCTTGGACATCACTGGCTGATATGCTGTTTGTAGATGC
ACCTGTAGGCTCTGGATTCAGCTACGTCGAACCACCTGACACTTATACTT
CAACTGAAAGCCAAATTGATGAAGATTTATATCAATTCTTAAAGAAATTT
CTTTCCGAAATGCCAGAATATCAGAACACACCATTCTACATATTTGGAGA
ATCGTACGGTGGTAAAATGGGAGCGTCGTTTGGAGTACGTCTTCAAGGTG
GCATACAATCGGGCGACGTTCGTGCTAATTTACGTGGCTTGATTTTAGGC
GATGCTTGGATTTCACCAACTGATTCTGTAGCTACTTGGGCGCCGTTCTT
AAAGGACGCCAACTTAATTTCGCCGACCGGATTCGAAGCTGTTTCTCAAA
TGACTAAACAAACAGTTGACGCGGCGGATAGTGGGCGGTACCAAGAAGCA
ACTGAACTCTGGAAACAAACACAGGgcgttatttttcaaaacacaaacaa
TGTTAATCCGTTTAACATCCAACAACATAATGCACCATCTTGCAACAAAG
AATCAACCAATGCTCTGATGAATGGCCAAATCAGACAAAAGCTACAAATC
ATCCCTCCCAACGTCATTTGGGATTCACATCGTAATGACGTCTTTGCAGC
TCAGTCTCAAGAATTTATGAGACCGGTTATCAATGAAGTAGGACAGCTCC
TATCCTCAGGACTCAAGGTAGTGATCATTCAAGGACAATTAGACTTACTA
TGCGACAGCCCTGGTACAGATGCTTGGATCAAGAAATTACCTTGGGGTGA
TTTGCCACAATATTTAGCAGCACCTTTGACGACAATGTCTCAAGGGAAAA
TGAGACGATATAAGAATTTGATATATTATGATGTGAGTAATGCCGGACAT
ATGGTACCGATTGATAAACCCTCTGCTGGATTGGAAATATTACAATTAGC
GATTTCAGATTGATAGTTTATATCGTTAAACCATAAAttgaatataagaa
ataaacttttgttgtattgtttagaaa

Coding sequence (CDS) from alignment at sc0000075_pilon:1121735..1123611+

>MSTRG.10724.1.p1 ID=MSTRG.10724.1.p1|Name=MSTRG.10724.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2466bp|location=Sequence derived from alignment at sc0000075_pilon:1121735..1123611+ (Clytia hemisphaerica_ch_hm2_pilon)
aaaaaattcaaaatgaaaccAATGATCCTCTTGGTCACAATCTTACCGTT
CCTACATGGTTTGATGAAAGATAACAATACTGGTGAAGCTTGGGGATATG
TTGATGTCCGAGAAGGTGCTCATATCTTCTGGTGGTTGTACGGTCAATCT
GCAAACACACCAAAGAATCCTACAAGACCACTGGTCATGTGGCTACAAGG
TGGTCCTGGTGCGTCATCAACAGGATTCGGTAATTTAGCAGAAGTTGGCC
CTCTTGATGAGAACCTATCACCTCGATCAGGACCTTGGACATCACTGGCT
GATATGCTGTTTGTAGATGCACCTGTAGGCTCTGGATTCAGCTACGTCGA
ACCACCTGACACTTATACTTCAACTGAAAGCCAAATTGATGAAGATTTAT
ATCAATTCTTAAAGAAATTTCTTTCCGAAATGCCAGAATATCAGAACACA
CCATTCTACATATTTGGAGAATCGTACGGTGGTAAAATGGGAGCGTCGTT
TGGAGTACGTCTTCAAGGTGGCATACAATCGGGCGACGTTCGTGCTAATT
TACGTGGCTTGATTTTAGGCGATGCTTGGATTTCACCAACTGATTCTGTA
GCTACTTGGGCGCCGTTCTTAAAGGACGCCAACTTAATTTCGCCGACCGG
ATTCGAAGCTGTTTCTCAAATGACTAAACAAACAGTTGACGCGGCGGATA
GTGGGCGGTACCAAGAAGCAACTGAACTCTGGAAACAAACACAGGgcgtt
atttttcaaaacacaaacaaTGTTAATCCGTTTAACATCCAACAACATAA
TGCACCATCTTGCAACAAAGAATCAACCAATGCTCTGATGAATGGCCAAA
TCAGACAAAAGCTACAAATCATCCCTCCCAACGTCATTTGGGATTCACAT
CGTAATGACGTCTTTGCAGCTCAGTCTCAAGAATTTATGAGACCGGTTAT
CAATGAAGTAGGACAGCTCCTATCCTCAGGACTCAAGGTAGTGATCATTC
AAGGACAATTAGACTTACTATGCGACAGCCCTGGTACAGATGCTTGGATC
AAGAAATTACCTTGGGGTGATTTGCCACAATATTTAGCAGCACCTTTGAC
GACAATGTCTCAAGGGAAAATGAGACGATATAAGAATTTGATATATTATG
ATGTGAGTAATGCCGGACATATGGTACCGATTGATAAACCCTCTGCTGGA
TTGGAAATATTACAATTAGCGATTTCAGATTGAaaaaaattcaaaatgaa
accAATGATCCTCTTGGTCACAATCTTACCGTTCCTACATGGTTTGATGA
AAGATAACAATACTGGTGAAGCTTGGGGATATGTTGATGTCCGAGAAGGT
GCTCATATCTTCTGGTGGTTGTACGGTCAATCTGCAAACACACCAAAGAA
TCCTACAAGACCACTGGTCATGTGGCTACAAGGTGGTCCTGGTGCGTCAT
CAACAGGATTCGGTAATTTAGCAGAAGTTGGCCCTCTTGATGAGAACCTA
TCACCTCGATCAGGACCTTGGACATCACTGGCTGATATGCTGTTTGTAGA
TGCACCTGTAGGCTCTGGATTCAGCTACGTCGAACCACCTGACACTTATA
CTTCAACTGAAAGCCAAATTGATGAAGATTTATATCAATTCTTAAAGAAA
TTTCTTTCCGAAATGCCAGAATATCAGAACACACCATTCTACATATTTGG
AGAATCGTACGGTGGTAAAATGGGAGCGTCGTTTGGAGTACGTCTTCAAG
GTGGCATACAATCGGGCGACGTTCGTGCTAATTTACGTGGCTTGATTTTA
GGCGATGCTTGGATTTCACCAACTGATTCTGTAGCTACTTGGGCGCCGTT
CTTAAAGGACGCCAACTTAATTTCGCCGACCGGATTCGAAGCTGTTTCTC
AAATGACTAAACAAACAGTTGACGCGGCGGATAGTGGGCGGTACCAAGAA
GCAACTGAACTCTGGAAACAAACACAGGgcgttatttttcaaaacacaaa
caaTGTTAATCCGTTTAACATCCAACAACATAATGCACCATCTTGCAACA
AAGAATCAACCAATGCTCTGATGAATGGCCAAATCAGACAAAAGCTACAA
ATCATCCCTCCCAACGTCATTTGGGATTCACATCGTAATGACGTCTTTGC
AGCTCAGTCTCAAGAATTTATGAGACCGGTTATCAATGAAGTAGGACAGC
TCCTATCCTCAGGACTCAAGGTAGTGATCATTCAAGGACAATTAGACTTA
CTATGCGACAGCCCTGGTACAGATGCTTGGATCAAGAAATTACCTTGGGG
TGATTTGCCACAATATTTAGCAGCACCTTTGACGACAATGTCTCAAGGGA
AAATGAGACGATATAAGAATTTGATATATTATGATGTGAGTAATGCCGGA
CATATGGTACCGATTGATAAACCCTCTGCTGGATTGGAAATATTACAATT
AGCGATTTCAGATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10724MSTRG.10724Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10724.1.p1.exon1MSTRG.10724.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10724.1.p1.exon2MSTRG.10724.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10724.1.p1MSTRG.10724.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000075_pilongenomesc0000075_pilon:1121735..1123611 +