MSTRG.1072.6.p1 (mRNA) -

Overview
NameMSTRG.1072.6.p1
Unique NameMSTRG.1072.6.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000005_pilon:1773350..1774850-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.1072.6.p1 ID=MSTRG.1072.6.p1|Name=MSTRG.1072.6.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1501bp|location=Sequence derived from alignment at sc0000005_pilon:1773350..1774850- (Clytia hemisphaerica_ch_hm2_pilon)
TTCACGAATGGTTAGGGAAAATTTCTAAAGATTTTGTTCAATCCAAGTAG AAATACCTGACTCAAAATCATTTGGTATTGTTTCATTTCAGCGATAAAAA AAGAACAGAAAAACAAGAAATTATTTAAAAAAACAGCTACAATGGCCAGC ATCAATTGTGACAACATCGTTCCGAACGAAGAGCGAAATGGAAAATTAGT TCCGTTCGATTTCCATGAAAATGAATGTGACGTCATTATTAAGACAAAAG ACAAAGAAGTTCAGTTGCCATCCAGTTTCTTAGAAATGGTATCTAGTCCA ATGGATTTCAATAACAACGAAAATAATCTTTTCGACGTTGATGTTTGTGC TGAAAGTGTAACCAAAGCGTTGTCATTTTATCACCCTAAGGATTGGACCA ACAAAATTGACTGTAAGTTTCGACTCTTTTCGCATTTTGTAAGTATCAAT CAAAAGCCATACCGTATTGCTTTGAATAAACGCCCCGGGTGTGTTTAAAG GTGGCGTTCATCGAAAATCTTTCCTTAAATTAGTAGCTACAAGATAGGCC GATTCGCGAAATTCTATCCACTCGAAAAATTTTGATCTTCGATTCGCGAA AAAAAGTCCACGTGAAAATTAAAGATCAGCGACTTTAAGGTAGTACCAAG AAGGCTATTTTAGTTTAAAGCTATAGAAGGTGCCAAGAGATTCTCATATT TTTATTTCTCATACAAATATGTTTTAATACTTTGGATTTTTTGTATTTTT AGGTTCGGAGTTGGATGATTTACTCTTAGTTACAAATACGCTTAAGCTAA AATCATTCAAATTACATTTAATCGAACATATGAAGACAGAATACGTATCA AAGTCAAAGCAATTTGATGAGAATTTACTGCAAGTTTTTCATGCTGCTCA AAAGTATGAATTGACTACATTAATTGAAACAATTAGATTAAGGTCTCTGC GCATCTTAGATTTGGCTAGAAGCCAACGTACATTATACCTCGCTGGAGAA AATATATCGATGTGAAATTTTAGAGACCTCTGTATATGAACATGTCAATA TCAACAATGATCCGGAGTTGCTTGCAATATTTCACCTCTTCAAATTAATT ATTCACAAATTTCAAAACCCCGACTTGGCTTCTAAAACAGATTTCTTAAC CCACCAGATTCATGAGCACTTTATTGATTATGAGTCAATTTCCTACAAAA AGGGTTTTCCAAATTGTGTCGTCTTGGACGTTGAGAACAAAGAAATTCAT GTCAGTTCGTATTTACTCATAAACAACTCTCCTGTATTCAAAGCAATGTT GAGTTCGACAAATTTCAAAGAAGGTCAAAACAGAAGGATTGAACTTCCTG GCAAGAAATTCAATGAAGTTGTCTACTTCCTTCAATTTCTACACACACTT CAAGATATTAAAGGTATTTTTGTGTACAATACTCTTGAAGTAACTTATCG TTTTTTGAACATTTCCCGACCTTTTTTCGACCTTCACAAACAAATTACTT C

Coding sequence (CDS) from alignment at sc0000005_pilon:1773350..1774850-

>MSTRG.1072.6.p1 ID=MSTRG.1072.6.p1|Name=MSTRG.1072.6.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=954bp|location=Sequence derived from alignment at sc0000005_pilon:1773350..1774850- (Clytia hemisphaerica_ch_hm2_pilon)
CAATGTTGAGTTCGACAAATTTCAAAGAAGGTCAAAACAGAAGGATTGAA
CTTCCTGGCAAGAAATTCAATGAAGTTGTCTACTTCCTTCAATTTCTACA
CACACTTCAAGATATTAAAGGTATTTTTGTGTACAATACTCTTGAAGTAA
CTTATCGTTTTTTGAACATTTCCCGACCTTTTTTCGACCTTCACAAACAA
ATTACTATGGCCAGCATCAATTGTGACAACATCGTTCCGAACGAAGAGCG
AAATGGAAAATTAGTTCCGTTCGATTTCCATGAAAATGAATGTGACGTCA
TTATTAAGACAAAAGACAAAGAAGTTCAGTTGCCATCCAGTTTCTTAGAA
ATGGTATCTAGTCCAATGGATTTCAATAACAACGAAAATAATCTTTTCGA
CGTTGATGTTTGTGCTGAAAGTGTAACCAAAGCGTTGTCATTTTATCACC
CTAAGGATTGGACCAACAAAATTGACTCAATGTTGAGTTCGACAAATTTC
AAAGAAGGTCAAAACAGAAGGATTGAACTTCCTGGCAAGAAATTCAATGA
AGTTGTCTACTTCCTTCAATTTCTACACACACTTCAAGATATTAAAGGTA
TTTTTGTGTACAATACTCTTGAAGTAACTTATCGTTTTTTGAACATTTCC
CGACCTTTTTTCGACCTTCACAAACAAATTACTATGGCCAGCATCAATTG
TGACAACATCGTTCCGAACGAAGAGCGAAATGGAAAATTAGTTCCGTTCG
ATTTCCATGAAAATGAATGTGACGTCATTATTAAGACAAAAGACAAAGAA
GTTCAGTTGCCATCCAGTTTCTTAGAAATGGTATCTAGTCCAATGGATTT
CAATAACAACGAAAATAATCTTTTCGACGTTGATGTTTGTGCTGAAAGTG
TAACCAAAGCGTTGTCATTTTATCACCCTAAGGATTGGACCAACAAAATT
GACT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.1072MSTRG.1072Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1072.6.p1.exon2MSTRG.1072.6.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1072.6.p1.exon1MSTRG.1072.6.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1072.6.p1MSTRG.1072.6.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000005_pilongenomesc0000005_pilon:1773350..1774850 -