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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:2010176..2014110+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.107.1.p3 ID=MSTRG.107.1.p3|Name=MSTRG.107.1.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3935bp|location=Sequence derived from alignment at sc0000001_pilon:2010176..2014110+ (Clytia hemisphaerica_ch_hm2_pilon)
AAATTTTGTAAAGCCAATCTTTGCACTTAGACTAACAGACCACACCAGAg
gtaaaaaaggtaaaattatttgaaatgaaAGGATTATTTCATTGCCTTTA
TGACTAACTAACTAAATTatagaaattcaaaatatctatTTTACAGTAGA
TCCAGCTTTGCCGgctttaaaagaaagttttttacaaaagtttgaAGGCT
GATATTTTTGTTCTTGTGGCTTTTAAAGTACACTGAgcacacttttttta
atttctcagCTAGTCCCTTGATTGCAAAtttttttGGCGTGAGCAAATTT
TTGCCTAATGCAATAATGTAATAGGGACGAATGGTCGGGTCGAAGGGACG
ATGCTTACTTTCACTATTTTTTGCGTAATAAACCGATTTCGGCGATTTTC
Gttctcttaagggctctgaccatagtccaaaaattgatttaggtatttga
acataaaagttatatttcaggttccttaacacttttaacaaagaattgcc
ttaataaattgctttttaatcgaatcccttaagagtaattaagaatttaa
ttgcaaaaatgacgttatgaactttaaaaagatgttaataatatgttgca
tcaccctcttttacaaaaagtgcttagttttaatgggtaattaacttttt
tgtttcaaaatttctttacactgtccgcaaagaattgaactattttaaat
tttgcggaaaatttttctaaaaagatgtgtcaaaagttattactgttttt
ttaagcaaaatccggatgaaaaattgatgaaaaaccactattttgaagat
ttcgagacaaagaagcatttacaaaaattttccgcaaaaatttttattgt
tcggtaaaagatacaccatctactgcgaaaaatttttcaaaatgtttttt
cttcgccgaaactaagctcttcaaagtttaaatactcttcctcgcaaaag
tcttcattttcttcttcatcaaattttttcaatgcaaattttgaattttc
agatttaggaatagtttgtctaacagaaaatgtataacatgccatagttt
tgttggttacatcagtcagaaaacacatattaaacacggcaattatgaaa
aattcactatggtcagagcccttaatataCCAAAATCTTTTAGCATTATG
TCGTGATGAAGTGTGTCGATCGTGGCCCCATTTCTAGAAAGTAATGATTA
TTTTCATCCAATTTTTCAGGTAAGTACACCATGGTTTCGCCGATATCTCG
AAGACGGGGCAATCAAAAGATCTCTAGAAACAATATTACCATAAGAACAT
CTCAGCGTACGGAGTTGAATCATCTATTAAGCATTCTGGAGAAAGATAAT
CGGTAAGAACTATCACCAAAAGATTCTGGGTTCCGTTTCCCAAGTGGAGT
TTCAAGTTCACAGCGTCGTTTAGTTGCcgataaattataaaaaaaacttc
tcacagaaaaattggcaaaaatatcgtccccggtgaaaAATTATACTATT
GTCCGTgctcagaaaaatttaataaataaatgtTCACCGCAAGATATTGT
GCTTATTTTTTCCATTCCCACTGAATGTTCTGGCTCGAAAATAATGGAGC
TCAAATCACCAGTCATGAAAAAACATAGGAATATTAATCTCCATCCAATT
TTGGTACATTATTTTTATAGCCCCACAGGTTCAAAAAatcccactgggtc
tgtgagaaaaggGTGTCTAAAGAATGCTAAATTAGGTCTTCGTTCGGTAA
TTTCAGATCTGCGTTTGCTGACGGAAAAAACTCTGTCGTCGGACTcttaa
aatgtaaataaagtTTAGACAGATTTGCCAACCATCGACCCTTATGAGAA
ATCTTTTAACTAATTTGATCTTTGCACATTATAGAGAACGATGGTCGGTC
TATGTTGTCCTCAATTTTGTAGAGAGAAGGGCCACACTTACCAAGTGTTA
ATTTCTGCCGCTATAACATGGGGGCTGGATGTTAGGGTTAGTCCGCGAGT
TTTAACGAAGatctgaaatttattttttatttcagagaATTCGAACGTGA
TTTAAGAATGTTGGCAGATCGATCAGACGCAGATTTGTCAACAAGACAAA
AGATTATCGATCAACACAATCAAACACTTGAAACAAAATTACAACGGATT
CGAATGTTGTTATTACAACTTGAAGAAACAAACACATCATTTGCCACCTA
CTGAAGACAtctttcgaccgtagccgccaatttctgcgcgggcatttttt
tgtccgttttaccaccctaaaaccgtccaaGTGtttttttGCgcgcctaa
agacaatagaaaaaactgTAAAGAAATAAGAATTGGATTGAGCTTAGGGT
TGATaaaaagtggcacgcgcctgaccacgcgactacggtcgaaatgATGT
ATTAATATCAATTCTGCATTTCCTCAATGTATGTCTATCAATCCGGATAA
ACGTTATCAAGAAGCCGGTTGATGTGAAGGCCAAGTGACTCAGGCGACTC
AAAACAGTAGACAATGGAATATTTCTTCcgaaatgaacttgaattgacaa
attTCAGATTGTCATAAAGCATTGCTCCTATAAAAACAGAAATAGTACCA
CAGAGAGTGACAGGCTAATGGAAGGACCGATGCATAGCCAACAATAAGTA
ATCCAGCGGTGATTTAGAAAGACATTTAGAAAGATTGTCCGACTAATTCG
AAGCTAAACTGaataaaaactattaaaatgTGGATCAATTTTCGGATTCC
TATAGGCACTTAAAATAAATGATGACTGAGAAACCTGGAATGGTGACTAG
TTAGAACTTGGTTAATGGTTTATGTTTGATTCTGGTTAaccatttatttt
ttgataactCAAAAAGGCTTCAAggattaaccctttaagtgccacggtcc
ttTCTTCAATAGTTATGGTGAAATTTatataagaaaagtaaaaaacataa
agatcataaaaatacacctgtcttcgttcaaaaaagttgaatgaaaGGGA
CTAGGTCGGAGTTTTCCAGGGTTGGATGGACgtcaaatttttgtcattgt
ATTGATACACTCATACTTACGCTTATTTTGACGGCATTTGATCCCGATAA
ACTTGAGCCTAATCCcttttaaaagtgttaaagcTGATACTGACTAGATG
TAAAATATCTTGCaagaattttcaatgtttttcaacTTAAAATGCAATCA
GGACAATCTGGATAGTTAAATTATATTGTATGTTGAATATCTGTAATGTT
TATCTTCCTTTGCCAAAATATTGGTTCTTTGCTTTTTCCCACATGGCTGG
TGAAGGGAATTCGTCTTTCCCATGCTTTCCAAGGATGGAATTTCTAATAT
CCCTCTTTCCAAAATATTGGTTCTTCGCTTTCTCCCACATGGCTGGCGAG
GGGAATTCGTCTTTCCCATGCTTTCCGAGGATGGAATTTCTAAATTCTCT
CTTTCCAAAATATTGGGATTTTGCTTTTTCCCACATACCTGGTGAGGGAA
ATTCGTCTTTCCTATTCATTCCAAAAGCGTCATTTTCAATTTCCCTCACC
AGTGACCTCCGAGAGTTATCTTTTCCAAAATTCTTCCTTCCAAATCTTCT
CATCAGGGAATCTCCTCGCTTCCAGATCCCCAGAGAAGGATTTACCCTTA
AGATTGAGTGAAGGGAATCTCCTCGTCTCCAAACACTAAGTGAGGGTGAT
TCCaaagatttcttcattttcgacCCCAGGCTCAGGGAATCGTCTTTCTT
TCCAATAGCCAGGAAAGAGGATCGACCTCTTTTGGGAATTCCCCGCCGGG
AATCTTTACGATATGTCTCCATAGCTTGTGATTTTGCAGTTTCCCACATT
CCACCACTTGGCAAATCATTCTCACCATGAGAATTTATCAATTGCTGTGC
GTCATTTGGGCCTCTGATGGATAATCCATGAGTAT Coding sequence (CDS) from alignment at sc0000001_pilon:2010176..2014110+ >MSTRG.107.1.p3 ID=MSTRG.107.1.p3|Name=MSTRG.107.1.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1080bp|location=Sequence derived from alignment at sc0000001_pilon:2010176..2014110+ (Clytia hemisphaerica_ch_hm2_pilon)
AATTTTGTAAAGCCAATCTTTGCACTTAGACTAACAGACCACACCAGAgg
taaaaaagGTAAGTACACCATGGTTTCGCCGATATCTCGAAGACGGGGCA
ATCAAAAGATCTCTAGAAACAATATTACCATAAGAACATCTCAGCGTACG
GAGTTGAATCATCTATTAAGCATTCTGGAGAAAGATAATCGagaATTCGA
ACGTGATTTAAGAATGTTGGCAGATCGATCAGACGCAGATTTGTCAACAA
GACAAAAGATTATCGATCAACACAATCAAACACTTGAAACAAAATTACAA
CGGATTCGAATGTTGTTATTACAACTTGAAGAAACAAACACATCATTTGC
CACCTACTGAAATTTTGTAAAGCCAATCTTTGCACTTAGACTAACAGACC
ACACCAGAggtaaaaaagGTAAGTACACCATGGTTTCGCCGATATCTCGA
AGACGGGGCAATCAAAAGATCTCTAGAAACAATATTACCATAAGAACATC
TCAGCGTACGGAGTTGAATCATCTATTAAGCATTCTGGAGAAAGATAATC
GagaATTCGAACGTGATTTAAGAATGTTGGCAGATCGATCAGACGCAGAT
TTGTCAACAAGACAAAAGATTATCGATCAACACAATCAAACACTTGAAAC
AAAATTACAACGGATTCGAATGTTGTTATTACAACTTGAAGAAACAAACA
CATCATTTGCCACCTACTGAAATTTTGTAAAGCCAATCTTTGCACTTAGA
CTAACAGACCACACCAGAggtaaaaaagGTAAGTACACCATGGTTTCGCC
GATATCTCGAAGACGGGGCAATCAAAAGATCTCTAGAAACAATATTACCA
TAAGAACATCTCAGCGTACGGAGTTGAATCATCTATTAAGCATTCTGGAG
AAAGATAATCGagaATTCGAACGTGATTTAAGAATGTTGGCAGATCGATC
AGACGCAGATTTGTCAACAAGACAAAAGATTATCGATCAACACAATCAAA
CACTTGAAACAAAATTACAACGGATTCGAATGTTGTTATTACAACTTGAA
GAAACAAACACATCATTTGCCACCTACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:2010176..2014110 + |
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