MSTRG.10645.1.p1 (mRNA) -

Overview
NameMSTRG.10645.1.p1
Unique NameMSTRG.10645.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000074_pilon:1272280..1276672-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10645.1.p1 ID=MSTRG.10645.1.p1|Name=MSTRG.10645.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4393bp|location=Sequence derived from alignment at sc0000074_pilon:1272280..1276672- (Clytia hemisphaerica_ch_hm2_pilon)
GCACATTGCTACGGATTCACGTAACAACTCAATCACGTATTGTTGATCAT
CACGGATTGTTGGACATCACAAATTGTTGGAAATCACGAATTGTCGGACA
TCACGAATTGTTGGATATCACAAATTGTTTCTAGAGAGACTCATCTCAAA
CAAGTCATCATAAGTTCAAAATGATGGACAATGCTGGCTGATCACAGTCA
ACATTTGCTTGACATCATCAAGCTTGAATTGATTGGGAAACGCTGATTCC
AAGTGTCAACGTCAATTGAAAGATTCAGGAACACGAAATTTGAAGAAGAA
AATGAAAGAAAAGATCACCTGGAACTGCAGCATTGTCAATTGCTCAGGTG
AATTGTTGAGTCTGTAAGCGAAGCCATTGTTCCGAGCGCTGTCAGGATGT
CAACTTTCATTCCAAACCAGGATCAGAAAAGATGAACCCAACTAGTGAAT
ATTAGCTGAAAATGATATGCTTTTTAGGGTATCTGAATTTCAGTCCCCAA
CTCCTTATTGGCTTAGATGCTCTTTAGAAATCTATAGGGGGGGGCTGAAA
CCATGTTTATAATTTTTTTTCTTTCTCCTTTTTGGGTTTTTGGCAACTTG
AAGTTTGCATGTAATACTTGCTATGCTATGACATCTCAAACATTACTAAC
TATGGTAGCTGTCTGTATTCTCATTTTCTTGTGTTTTTTTTTAACTTGCT
TATAAAATAAAAAGGAATGATTAAAGAATAACAAAATGATAGTTCAAGGA
AAAATCTATGTAGCATTATTGGTGCTTTGTTGCTTTTGTGGAGCCGTTTC
ATCAAATGCCTGTTCACCAGGGTTTCAAAAAGATGCTTTAACAGAGAAAT
GTAGAGAATGTGTTGAAGGTACCTTCAGCATTGATGGAGGAGCTTGTCAG
AAATGCTTACCAGGTGAAAAAGTTTGTTTATTTTTTAACTTATGCTAAGT
TCAGATGGACTAGAATATACCCTTGCCAAACTTTATCATCACTGTAGATT
GTAATTATCTGGTTGGAGATAAATGTTATTATTATCCGCAGAAAGTATTG
ACGTGTAATGTTGCATGGACAAGGAAATTCGTGATAAACCTGGGTAAACT
CTACACCAGTCTTCTCACACTTTCTGAAAGGTTGATGTATGTGTGTGTAT
TATTTGTGGATAACGTTATTTTTTGTTTCTACAATTAATATTGATCTTTT
TGATGGTTGTACATGTTTAAAAAAAAAAAAAATTAGACAAAAATTCATGT
TTTATAATTCGATACGGTCACATATTTCTTTTAATAATTCATTTAAACAT
CTAGATATTTTTACTATACTATTTTTGTAGGTACTTTTGCAAATAAGACG
GGGTCAATCAAATGCAAGCCATGTGCAAATGGAACGATATCTAGAACGGA
AGCCAGCACGAGTTGTCAGAAATGTCAACAAATAGACTGGTTACCAAACA
AAGACCAAACAGAATGCATCCAAAATGAATTTGTATACAAACTAAATGAC
GCTTTGGTATACGATTTTTCGAAATTAGCAGAAAAACAGGATCAGAGGTA
TACTATTAATGGTAAAACGTATCCAAACGAAGATCCCTCTAAAGATGATA
TAAATATGTTTATTAACATCAATATCTCGTTTTGTACGCCTCAGTTCCAC
CATCAGTGTAAAGATACAATGAATGTGAGTATAAAGACTTCATTTCACAA
AATAAATGAACTAAATCAGCTTAACATCCGAGAATCTAATATTTTTGTTC
GGTAACCTTAATTGATTTGACTATTTGTCAAAGCCTTCTTCAGTAGAAAT
CCGCTTTACTGAAATAGTGACTTAAAACTTGCGGATCTGAACCTTTATCC
AACAGAATTGATAAACGGCTATTTATAGATAGTATTTCAAATGAAATTCT
TCTTTTCAGGGACAATTTCAAATTGAAGTTACAAAGAATATTTCGGCTCT
CTGGGCCGACATTCATACTCGAGCCAGCATGGGAAAGAAATTTACCGCCC
GTCGTGGCGTAGACCCTCCAGCCAAAGGTTTTATCCTCGAATCAACAGAT
GGCACGTGCATTGATCGTTTTGGTAGACCATTAAATCGAACTCAACGAAC
GACCATTAATATGGAATGTAATATTCAAGCTCGATCAAAACCTGGCGAAG
ACAAAACATTAATTTTTGTGAATAATAGTAAGTCAACGAAATTTCTATTT
CCCACTAGATATTTTTTGGGGTTCCCCTCGTGTCCAGCCTTTTCAGATAA
ATTTTTATAATATCCTAGTATTTGTATGAAATTGCGGTCTTTAAAATCGT
AAAAACAATGGAGGAACCAAAAATTCAGCCATAATTTTCATTTAACTCTC
AAATGTAACTTTCTCTCAATTTCGTCTCTCACTGTATAATCACCAACATT
TGAAAGTGCTTTTTCTTAAGGTTAAGCATAGCTGAATGTACTGTTGTTCC
GAGATAGATTGACCCTACCTTCAAAGTTTACTGTACAAAACTTCGACATG
GAGTTGTATAAAGCTTTATTTCCTGTTCAAAGGTACCGACGAATGTTTAT
TGGATCTGACTTTACATACGCGTTACGCATGTCCAAGATGCACTTGTGAC
AATTATCTTGACTCAACAGAAGATAACAAATGTTGGACAGAACAAATTGG
TTTTTGTAATTTCGATTACGTTGTTAACAAGAAGATGGAAAGAAAATGCT
CGCACGTCAACCAGGTAACTCTCCCTCGCTATCTGGTTTAGGTTGCAACC
AAAATAATGTCTCGTAGACTGGAATCGAAGTGTTTTAAATCCAATAAATT
TCAAGCTGTAGAATCGATTCGATTCAGTTTCAGCTGAAATTTTGGCCGTC
AGTCATATATATACGTCATAGGAATAGGAAAAATTTCTCCAAACGAAGAC
TTTCCCTTTAGGAAGAGTGATCATAAGTTCCAGTGTATTATGCCCTAAAG
TGGACGGGATCAGTCTTTGTTATGAGTCAACTGGACCGGACTCATTCTTC
TGATTCGAAGCTTCTTTGGAGGTTTTTTATGTTTTTTAAGTTCCATAACT
TCCGCCTTTATTAAAGCAAACGTTCGATTTGTGTAAATGATCGCCTCTAC
AGATTCGAACGTTTTCTTCCATAATGGCGGGAAAACGTAACTTATCAAAA
CATGGAAAACCTCTATTGTAGTAGGGAGCCAGCCCCTTGGTGAGTGATAC
TATAATCGGATTGATTTTCGCGAAATTTACCTTAACGACAAACCAATGAC
AAAATAAATTTACTATCAATTTGTAAAGACGATCTTATGTTAAAAAAGTC
AATGAATTTTCTGACCATTTTCAGATTTTCAGAGTCCATGATCCCATTCG
ATTTTTTTGAGATTTTTTCTTGCAAAAATGGCAAAAGTTCGAGAAAATGC
AAAATTAAATCTCGCCTAAAATTCATCCGGTTAAAGTATACGTGGGACTT
TATAAATATATCTCTTTAAAATTTTTAGTGTGACAAGTCAAACATTGTGG
ATTTTGACTTTCCACACAAAGAAAAGCACGGTACGCCAGCTTGGGTGTAT
GTAATCGGTGCTATCGTAGCATTTTTATTTATATGCGGTGGTATTTTTAT
GCTGATACGTTACTTGAAGCAACAACATTCACCTCAAAATGCTACTGCAT
GGACATCACTTCAAAATGAATTGTAATTTATACAATCCAGGTGAAGTCGT
CATCGGGTTTTGCTGAAGTTATGCAATTAACCAAAAATACGACATTTATG
GAATCGGATGTTCGAATTTGTAGAGTCGATTTCACTTCCATCAAGGCAGA
AGCTATGTAACTTAGTCAAAACCAAGTGCAGTTATTGGATTAAATGAATT
ATTTATTTAGTAGAAAATTAGCGAGTATTAGGGTATTAGCGATGACTTTA
AATCACAAGATAATGATCTGTTAATTTTTGTAACGTTTTTGCATACTGTA
CATACTGTATATGTAAACCAAAACTTTATTTTATTCTGTATTATATCGAA
ACCCGGACGTCTTTTATCCTCTTTTATCAATCTTTTACCTTCTATCATAC
ATTTACTATTTATTTTACAATTTCTTTCATTTTGTTTAGACATGTCTCTT
AACCTTTTAGTTTGATAGTTTTTATGCGAACTTAGAAGAGATGGTCGTCT
TCTGTAACAGAAGTGACAATCATCATCAAACCAAAACTATTTTCATTTGA
CCACTACATTAGTTTTTATAAGTTAAAATAATGTAATATAATACAACCAG
TAATCAGTAATAACGTTGTATGTAGAGTGAATTGTACATAACTTTTGATA
ACATACTATATAATAATTATATTAGAATATTTATACTATTTTACCTACTC
TTGTGTACTTAAATGTTAAAATCTTTAAAAAAATCTTGATCTA

Coding sequence (CDS) from alignment at sc0000074_pilon:1272280..1276672-

>MSTRG.10645.1.p1 ID=MSTRG.10645.1.p1|Name=MSTRG.10645.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5850bp|location=Sequence derived from alignment at sc0000074_pilon:1272280..1276672- (Clytia hemisphaerica_ch_hm2_pilon)
TGTGACAAGTCAAACATTGTGGATTTTGACTTTCCACACAAAGAAAAGCA
CGGTACGCCAGCTTGGGTGTATGTAATCGGTGCTATCGTAGCATTTTTAT
TTATATGCGGTGGTATTTTTATGCTGATACGTTACTTGAAGCAACAACAT
TCACCTCAAAATGCTACTGCATGGACATCACTTCAAAATGAATTGTAAGT
ACCGACGAATGTTTATTGGATCTGACTTTACATACGCGTTACGCATGTCC
AAGATGCACTTGTGACAATTATCTTGACTCAACAGAAGATAACAAATGTT
GGACAGAACAAATTGGTTTTTGTAATTTCGATTACGTTGTTAACAAGAAG
ATGGAAAGAAAATGCTCGCACGTCAACCAGGGACAATTTCAAATTGAAGT
TACAAAGAATATTTCGGCTCTCTGGGCCGACATTCATACTCGAGCCAGCA
TGGGAAAGAAATTTACCGCCCGTCGTGGCGTAGACCCTCCAGCCAAAGGT
TTTATCCTCGAATCAACAGATGGCACGTGCATTGATCGTTTTGGTAGACC
ATTAAATCGAACTCAACGAACGACCATTAATATGGAATGTAATATTCAAG
CTCGATCAAAACCTGGCGAAGACAAAACATTAATTTTTGTGAATAATAGT
ACTTTTGCAAATAAGACGGGGTCAATCAAATGCAAGCCATGTGCAAATGG
AACGATATCTAGAACGGAAGCCAGCACGAGTTGTCAGAAATGTCAACAAA
TAGACTGGTTACCAAACAAAGACCAAACAGAATGCATCCAAAATGAATTT
GTATACAAACTAAATGACGCTTTGGTATACGATTTTTCGAAATTAGCAGA
AAAACAGGATCAGAGGTATACTATTAATGGTAAAACGTATCCAAACGAAG
ATCCCTCTAAAGATGATATAAATATGTTTATTAACATCAATATCTCGTTT
TGTACGCCTCAGTTCCACCATCAGTGTAAAGATACAATGAATATGATAGT
TCAAGGAAAAATCTATGTAGCATTATTGGTGCTTTGTTGCTTTTGTGGAG
CCGTTTCATCAAATGCCTGTTCACCAGGGTTTCAAAAAGATGCTTTAACA
GAGAAATGTAGAGAATGTGTTGAAGGTACCTTCAGCATTGATGGAGGAGC
TTGTCAGAAATGCTTACCAGTGTGACAAGTCAAACATTGTGGATTTTGAC
TTTCCACACAAAGAAAAGCACGGTACGCCAGCTTGGGTGTATGTAATCGG
TGCTATCGTAGCATTTTTATTTATATGCGGTGGTATTTTTATGCTGATAC
GTTACTTGAAGCAACAACATTCACCTCAAAATGCTACTGCATGGACATCA
CTTCAAAATGAATTGTAAGTACCGACGAATGTTTATTGGATCTGACTTTA
CATACGCGTTACGCATGTCCAAGATGCACTTGTGACAATTATCTTGACTC
AACAGAAGATAACAAATGTTGGACAGAACAAATTGGTTTTTGTAATTTCG
ATTACGTTGTTAACAAGAAGATGGAAAGAAAATGCTCGCACGTCAACCAG
GGACAATTTCAAATTGAAGTTACAAAGAATATTTCGGCTCTCTGGGCCGA
CATTCATACTCGAGCCAGCATGGGAAAGAAATTTACCGCCCGTCGTGGCG
TAGACCCTCCAGCCAAAGGTTTTATCCTCGAATCAACAGATGGCACGTGC
ATTGATCGTTTTGGTAGACCATTAAATCGAACTCAACGAACGACCATTAA
TATGGAATGTAATATTCAAGCTCGATCAAAACCTGGCGAAGACAAAACAT
TAATTTTTGTGAATAATAGTACTTTTGCAAATAAGACGGGGTCAATCAAA
TGCAAGCCATGTGCAAATGGAACGATATCTAGAACGGAAGCCAGCACGAG
TTGTCAGAAATGTCAACAAATAGACTGGTTACCAAACAAAGACCAAACAG
AATGCATCCAAAATGAATTTGTATACAAACTAAATGACGCTTTGGTATAC
GATTTTTCGAAATTAGCAGAAAAACAGGATCAGAGGTATACTATTAATGG
TAAAACGTATCCAAACGAAGATCCCTCTAAAGATGATATAAATATGTTTA
TTAACATCAATATCTCGTTTTGTACGCCTCAGTTCCACCATCAGTGTAAA
GATACAATGAATATGATAGTTCAAGGAAAAATCTATGTAGCATTATTGGT
GCTTTGTTGCTTTTGTGGAGCCGTTTCATCAAATGCCTGTTCACCAGGGT
TTCAAAAAGATGCTTTAACAGAGAAATGTAGAGAATGTGTTGAAGGTACC
TTCAGCATTGATGGAGGAGCTTGTCAGAAATGCTTACCAGTGTGACAAGT
CAAACATTGTGGATTTTGACTTTCCACACAAAGAAAAGCACGGTACGCCA
GCTTGGGTGTATGTAATCGGTGCTATCGTAGCATTTTTATTTATATGCGG
TGGTATTTTTATGCTGATACGTTACTTGAAGCAACAACATTCACCTCAAA
ATGCTACTGCATGGACATCACTTCAAAATGAATTGTAAGTACCGACGAAT
GTTTATTGGATCTGACTTTACATACGCGTTACGCATGTCCAAGATGCACT
TGTGACAATTATCTTGACTCAACAGAAGATAACAAATGTTGGACAGAACA
AATTGGTTTTTGTAATTTCGATTACGTTGTTAACAAGAAGATGGAAAGAA
AATGCTCGCACGTCAACCAGGGACAATTTCAAATTGAAGTTACAAAGAAT
ATTTCGGCTCTCTGGGCCGACATTCATACTCGAGCCAGCATGGGAAAGAA
ATTTACCGCCCGTCGTGGCGTAGACCCTCCAGCCAAAGGTTTTATCCTCG
AATCAACAGATGGCACGTGCATTGATCGTTTTGGTAGACCATTAAATCGA
ACTCAACGAACGACCATTAATATGGAATGTAATATTCAAGCTCGATCAAA
ACCTGGCGAAGACAAAACATTAATTTTTGTGAATAATAGTACTTTTGCAA
ATAAGACGGGGTCAATCAAATGCAAGCCATGTGCAAATGGAACGATATCT
AGAACGGAAGCCAGCACGAGTTGTCAGAAATGTCAACAAATAGACTGGTT
ACCAAACAAAGACCAAACAGAATGCATCCAAAATGAATTTGTATACAAAC
TAAATGACGCTTTGGTATACGATTTTTCGAAATTAGCAGAAAAACAGGAT
CAGAGGTATACTATTAATGGTAAAACGTATCCAAACGAAGATCCCTCTAA
AGATGATATAAATATGTTTATTAACATCAATATCTCGTTTTGTACGCCTC
AGTTCCACCATCAGTGTAAAGATACAATGAATATGATAGTTCAAGGAAAA
ATCTATGTAGCATTATTGGTGCTTTGTTGCTTTTGTGGAGCCGTTTCATC
AAATGCCTGTTCACCAGGGTTTCAAAAAGATGCTTTAACAGAGAAATGTA
GAGAATGTGTTGAAGGTACCTTCAGCATTGATGGAGGAGCTTGTCAGAAA
TGCTTACCAGTGTGACAAGTCAAACATTGTGGATTTTGACTTTCCACACA
AAGAAAAGCACGGTACGCCAGCTTGGGTGTATGTAATCGGTGCTATCGTA
GCATTTTTATTTATATGCGGTGGTATTTTTATGCTGATACGTTACTTGAA
GCAACAACATTCACCTCAAAATGCTACTGCATGGACATCACTTCAAAATG
AATTGTAAGTACCGACGAATGTTTATTGGATCTGACTTTACATACGCGTT
ACGCATGTCCAAGATGCACTTGTGACAATTATCTTGACTCAACAGAAGAT
AACAAATGTTGGACAGAACAAATTGGTTTTTGTAATTTCGATTACGTTGT
TAACAAGAAGATGGAAAGAAAATGCTCGCACGTCAACCAGGGACAATTTC
AAATTGAAGTTACAAAGAATATTTCGGCTCTCTGGGCCGACATTCATACT
CGAGCCAGCATGGGAAAGAAATTTACCGCCCGTCGTGGCGTAGACCCTCC
AGCCAAAGGTTTTATCCTCGAATCAACAGATGGCACGTGCATTGATCGTT
TTGGTAGACCATTAAATCGAACTCAACGAACGACCATTAATATGGAATGT
AATATTCAAGCTCGATCAAAACCTGGCGAAGACAAAACATTAATTTTTGT
GAATAATAGTACTTTTGCAAATAAGACGGGGTCAATCAAATGCAAGCCAT
GTGCAAATGGAACGATATCTAGAACGGAAGCCAGCACGAGTTGTCAGAAA
TGTCAACAAATAGACTGGTTACCAAACAAAGACCAAACAGAATGCATCCA
AAATGAATTTGTATACAAACTAAATGACGCTTTGGTATACGATTTTTCGA
AATTAGCAGAAAAACAGGATCAGAGGTATACTATTAATGGTAAAACGTAT
CCAAACGAAGATCCCTCTAAAGATGATATAAATATGTTTATTAACATCAA
TATCTCGTTTTGTACGCCTCAGTTCCACCATCAGTGTAAAGATACAATGA
ATATGATAGTTCAAGGAAAAATCTATGTAGCATTATTGGTGCTTTGTTGC
TTTTGTGGAGCCGTTTCATCAAATGCCTGTTCACCAGGGTTTCAAAAAGA
TGCTTTAACAGAGAAATGTAGAGAATGTGTTGAAGGTACCTTCAGCATTG
ATGGAGGAGCTTGTCAGAAATGCTTACCAGTGTGACAAGTCAAACATTGT
GGATTTTGACTTTCCACACAAAGAAAAGCACGGTACGCCAGCTTGGGTGT
ATGTAATCGGTGCTATCGTAGCATTTTTATTTATATGCGGTGGTATTTTT
ATGCTGATACGTTACTTGAAGCAACAACATTCACCTCAAAATGCTACTGC
ATGGACATCACTTCAAAATGAATTGTAAGTACCGACGAATGTTTATTGGA
TCTGACTTTACATACGCGTTACGCATGTCCAAGATGCACTTGTGACAATT
ATCTTGACTCAACAGAAGATAACAAATGTTGGACAGAACAAATTGGTTTT
TGTAATTTCGATTACGTTGTTAACAAGAAGATGGAAAGAAAATGCTCGCA
CGTCAACCAGGGACAATTTCAAATTGAAGTTACAAAGAATATTTCGGCTC
TCTGGGCCGACATTCATACTCGAGCCAGCATGGGAAAGAAATTTACCGCC
CGTCGTGGCGTAGACCCTCCAGCCAAAGGTTTTATCCTCGAATCAACAGA
TGGCACGTGCATTGATCGTTTTGGTAGACCATTAAATCGAACTCAACGAA
CGACCATTAATATGGAATGTAATATTCAAGCTCGATCAAAACCTGGCGAA
GACAAAACATTAATTTTTGTGAATAATAGTACTTTTGCAAATAAGACGGG
GTCAATCAAATGCAAGCCATGTGCAAATGGAACGATATCTAGAACGGAAG
CCAGCACGAGTTGTCAGAAATGTCAACAAATAGACTGGTTACCAAACAAA
GACCAAACAGAATGCATCCAAAATGAATTTGTATACAAACTAAATGACGC
TTTGGTATACGATTTTTCGAAATTAGCAGAAAAACAGGATCAGAGGTATA
CTATTAATGGTAAAACGTATCCAAACGAAGATCCCTCTAAAGATGATATA
AATATGTTTATTAACATCAATATCTCGTTTTGTACGCCTCAGTTCCACCA
TCAGTGTAAAGATACAATGAATATGATAGTTCAAGGAAAAATCTATGTAG
CATTATTGGTGCTTTGTTGCTTTTGTGGAGCCGTTTCATCAAATGCCTGT
TCACCAGGGTTTCAAAAAGATGCTTTAACAGAGAAATGTAGAGAATGTGT
TGAAGGTACCTTCAGCATTGATGGAGGAGCTTGTCAGAAATGCTTACCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10645MSTRG.10645Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10645.1.p1MSTRG.10645.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10645.1.p1.exon5MSTRG.10645.1.p1.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10645.1.p1.exon4MSTRG.10645.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10645.1.p1.exon3MSTRG.10645.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10645.1.p1.exon2MSTRG.10645.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10645.1.p1.exon1MSTRG.10645.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000074_pilongenomesc0000074_pilon:1272280..1276672 -