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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000074_pilon:1086816..1092955+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10633.5.p1 ID=MSTRG.10633.5.p1|Name=MSTRG.10633.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6140bp|location=Sequence derived from alignment at sc0000074_pilon:1086816..1092955+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAGAGTTCAAATATTCAAGTTGACTGTGTTAGATTGGATGTTTCTGTCA
GTTCTTGATTTCGATTTAAAGAAGAACGGTTATGTCTTGTTTACTGTTGC
GAAAAGCTGCGTATTTAAATAGGCTCGAGTTCGAGTCAATTAGAGTGACG
TCAAATGTCTGAAGAGATTGCATTGATGCGCTCAGATATTCAGGCGTTAT
TTGACTCGGATAAACACAAGCCTTGTTCTTTTGTACATGTCGTAGGTGTT
GGATgatttttaaagttcttctGGCTAGTGTTATTAGGATTTTAATAAAC
AATTACATTCTTCCCGGCTCGATGTTTTGCTCGACGGTTTTGTAACGCTA
TCAGTTACCTTCAAGTTATCATCAAGTTTTGTTATCAGCAACCTCGAGGT
GTTTGTGGGGAAAGAGATGCATTGTCAATCTCTAATTTCTTATGTAATGT
TGAgtcacaattttcaaaaagagcatgaaaaaaaacagaatacaGGAAAA
TAGTGCTAAAGTAAGGGAAAAGTACCGCTAAAGGGAAGATTCTTCGAATT
TCAATGCGAGGGTTGTGTCATAAGATGCAAAATTATTAAACTACTAACAA
GGTCATAAACTAAAGGTGACTTTTTGATTCCACCAATCAAATGAAAGATT
TGTCAATAATGAACCAATCATAGCCACGTATTGGTTAATACTAATATCGT
CATTAAAATCAGCCATTAATTACGCAATTACTCAAAAGcggtaaaaagat
tcgaaaagtCCCACTTAAATCAGGTTGAAACTTTAATGTCgtcattttct
tttataagaatagtttaTTAAGAGAATGAGGCTTGATTTTGACCAAACTT
GAAGACAAAAGCCTTTTAACTTTTAGAAATGATCAAAGACAGGATTGAAG
ATTTTATGTACTTTCAAAGTTCTCACATAGTATAGAACATAACTTAAGAA
AGACTTCAAGAACACTTTACGTTGAATATCacaaaagattaagaacatcT
AATAATTTCAAAGAATAAACCTATTCTTATGAAGAAATGAGTATGTATAA
CTGGTTAATGAACTATTGTTGTTAATGAACTATTGTGGTTAATTTGAATT
TTCGAATGATTGCGAAAGCAGTCCCACTAAATGGAAATTAAGTAGCAATG
AAGTCATGCTATGTATTCTTGTTCTTTTCGTTCTAAAGAAAGCTCATTTT
GTGACGAAAAGGATATGGTTTGGAACAcagctgaattatttttttgacac
aATCAAATTTTGGATGATAGTAGAAATAttgaaactttgaataaaacAGG
TGTTATTATTTGAAACAGGGATTTTGTTTTGTTAGAGTTGATTATATGCG
TGTTAATGTGTGacgaaatgatgaaaaaattggaataaaaattcaaaagc
tttgaAATAATATACAAGTTCACAGGACTGTGAGTTGATAAAACATAcac
gttattttttataagaacaaccaaaAAGCCTTCAGATCGTGTTcttaact
ttgagttttaaagtctaaaaattttctcaacatgttcttatttttgacca
tttccctaagaaatagggtgttttggatccacaaagccttaaaatgttct
taacttgctcttaacattttggccagtgaagccttatgttcttatatagt
ttgttcttataaaaaaaccttttacgTAACAAACATAAACAATATGATGA
TAATAGTTTTATTGgcgaaaagaatatttttcttcgtttcgtttgtttat
ttgtttgatGTGATGACGCTGTATGATAAGGTTGGTCTGAAGTTGTTCTT
ATTGTCAGATTGATGGTTTTTATGGTCAGATTAAAGGGGCGTTTTAATAC
CGTAGCATCTCTaagaatttaaaataaattttagaggAAAATTGCAGACG
ATGCTTTTTTATTGCCTtggatatacacgtttttttttttataagaacgt
caaaaattttcgaagccttcggatgttcttagtttttggattttaagcct
aaaaatgttcttaaaacgttcttattttcagaattttttgagcattttga
tgtaatttcttaagaaaatgcatgtttttaagtctccaaagccttagaat
gttcttagaatgttcttaaatttttgggcctcgaagccttatgttcttat
atagtttgttcttataaaaaaaacgtgtaatagtTATGATCCACTTATTG
TAATGGTTTACTTGCTTAGTAAGGGATTTAAATAGGTGCTGGTCGATTTG
GTGTATCAAATATTCTTTCACCTCTTCCAGGGGAGGCATAGGAAAGCGTT
TCATCACAAGCAGAGTCGCATCTAGACAACTACATAAGTCAGACAGGGTC
TAACTCATTCAATATAGCTTAGTGCTTAAGGTCagaactaaaaatatttt
gctctAATGACgtgaaatattaattttttaatgaaattttttgttttcaa
tcaaaatttcaacccGAAAGAAGTGAGATTTTACTATTTAACATAAACag
ttttagtcaaatttttgtcccTATGTTCCTATTTTAAACAACAGCAAACT
TCAGAAGTGTGACGTTATGCTTAGTTTTGTTTCGAGACAATCTCCCAATC
GAAGTTTATTTTAAACTCTATTTTCTTTTGGCCCTTATTTTGAATAACAG
CTATGGCAAAGATTAATAACTTTCTCCTGGCGATATCATTTAAAGTTTTT
ACACAGTTAATTTATTCAAAGAGCAACTTTAACCTTAATTTGAGTTTTAG
TCTACTATACTTCAAAAACCTTGACCGACTTTCACATCTCAAATGATAGC
CTTAGGAATAAACAgtcttaaaattcaaatttcttttacgAGACTTTCAG
GACAATCTCTCAAAACAAGATGAAATAAATGGTTGAGAGACCAAGCCGAA
ATAAGCCATCAAAAAATATCCTCAATCTGAAAATCACAGCAaagttgttt
acttttttcctaTTTTGGTTTTCTAAATAACGGATAACTTATCCCCAATC
CGGAAATTCCCGACTAGCGGGTCCGGAGGTGCTAATCGCTCTAGAAAGTC
TCCTTGattgttgtttttgaattgggcgctatatttttcaaaaagatcat
cATGGGGGATCAACATTCAAATTGATACTGTATATTATCGCTATCTTGAC
GATATTCTTGATTCGCTTTTGAAGCTTCTTTGATCCTCTTTGAGATAGAA
TAAAACGCGTTTCAGATTTTTCTCTCTTGTTGccagatgaaatattttga
aagtcaaaaattcttgaACTCTAATCGATCGattactgatttttttttga
taatcgATATCTATAAGAgtgtcttttttgaaaacagCTTTTTCTTCGTG
TTTGGCGATTGTATTTATTTCAGTGCATTTCATGTTTGGATAGCTTGGTA
TAAGGTTCAAAAGATGTTAGAGCTACAAACGTTTTTCAAATCCTCAGTCA
CGATGCTTGTGTTTTCTTAAATCGATATAGAAGCATTCGTcattaacaaa
atttttcttcaaaaatttgaaaaataatattattctttttttcatcatca
gattCAATAACATTTGAGAATACAATCTTATCACCTCTCAAACGAAGCAT
GTCTGAGAATGGTTACCTCAACGCTGAAACTGCTGTTCAGAATCTGACCA
TCACCACATCTGCCAACACCACCACTAAGCCACAATTTAAACGTCAGAAA
TCGCTAGATTTAGAGGAAGATCAGCAACGATCAGTTTCGCCATCATCATC
ACCAAAGATGTTCTCATCACCAGAAGGTAGCATCAATACAAACAGACGTG
ATTCAAATGCCAGTTCTGATTCACAAAAAAGTGCTAAGAAACCAGCATCT
TTGGATGAAATACAAGACCTGTATAGTGCTTTACAAGACTTGGTCAAAAC
GAACGTGAGTACAACACCGTTGCCAGAACGACGTACCAAGATGTTGTCTC
CATCACCAATGAGCAGCCCTAGGTTGAGTGATCGTTCATTAACAGTACCT
GAGAAAACACTCAGAAAAATCTCCTCAAAAATCACACCGTCTTCTTCTTT
TGAGAAAGAACAATGCGAAGGAAGTCCAACGCCACGTTTGAAACATCGAA
GAGGAGTTTCAACAGGTACCATGGATTCTGTCATTAATTTAATGCGAATT
TCACCGTTCCCAGGACGTAAATTTTCACACGATGTCAATACAACGAGTCA
AAAAGACAGTAAAAAATTATCCACTTCTAAAACCCCGAATATGGTCTCCT
CCAAGGCCGGTAAGAAAGAACGCAATAGTGGCGATCATGGAAAACGTTGG
AAAGGCTCCAAATTATTTCACCGATTGCGATCGAAAAGTAATGCCGAATT
ATCCGACAACGACGACAAATTATCAACCGACGACGAGGAATGTGTTCGAG
aaaaaaaCCGCCGAATGTCCGAAGCCGATGCGTTGAAATTGAAGCGTAAC
CGAGATAGTGGGTTAACACCACCGCAACGTAAAAGTTTACAAGAGGAGAA
AAACAAGGATATCGAGAATTTAGTTGCATCTTTAACCATCAAGAGTTCTG
ATTCCAATTTGTTACAGACACCGAAAGAGACCTTTACGAACCCTTTGAAT
GAGTTAAATCAACTTGAGAGCTGGTTCGAAAAAGCATCCGTTGCACTAAA
CCCTAACGTAGGACGTTATATCTTAAATGACGAGTCGAGTAGCGACGCCG
CTTCACCAAACGTACGTGCTAACCGATTCCGTAAGAAGAACGGTAACAAA
CGTACTGGTCCGGGAATACGTAGAGCAAACTCTAACGTTGGAACGTCGCA
CCGTAATAAGGAGGAACGACGCGCCAAAAGGAATAAAATGACGTCCAAAA
GTTTCGACGCAACCGGATTAGCGCACGCTAAAAGTACACCTGATTTATCC
AAAACAGGTGTTGAATCAGAAGATATTTTAAACGATACAGGAATATCGTA
TAAAGTTTTAGGACAATTAAATCATTTCACTGAAAATCGAGTGCGTGATT
TAACACCGAAAGACAATAAGAAGGAATCGAAGAGAGTTTCTTTAGATGCT
AATTCAGTTAAACGATTACCTGACACGCCTTTATTCTATGTACCTGGGGA
CGAAGAGAATGGAAGACTAAGCTCGAGTGAGttatcaaaaacatttaaaa
ggcAGAAATCAGAAGGCTCAATGTTTTACACCGAGGAACAAAGCAAAAAC
GCTAAAAACTTATTATCTCCgcctgctgagtcagcaaattCATACGAAAA
GCCTCAAAGAAGTGAATCCTTATCAACTCCTAATAAATCGAATAACAAAA
GATCgaacaacaataaaataaagaacaaaacaaGACCCAAATCAATGTTT
GACTATTTTGATCAAGAAATCTTAGGGGAGGATCCTAACGATGAGGTTTG
GTCGTCCGAAGAAAAAGACATTGtacaacaaaacaattttgataATAACG
CTAATTTTTGTCGAGCCAAAATCATGAATAATGCACACCGACTATCTTTA
TGTGATTTGACCAAAACGACTGTGGTTCAAGAGAAAACTTTGTGGGACAA
GTTCAGTAAAGTGGCAGCAAGCAAGAAAGCTAAAGCTTGTAAGTAtcctt
ttctttccaaaatatttATCTGAAACTTTGAATATAGCCATGAgtcagaa
gaaaatttttaaagatcttATCAGCTTATATTTTATGAACGATATATTCA
GCTCCCGTTGCATTTGTAGAACATGTTTAGCTTCACATTTTTGTTAAGTT
TTCTTTTGTCATGATTTTCAATTTAGCACAACTTTGCATAAAATTcttct
aaaaattacaaaataggTACTAACTAAAAATCAAGTTTCCAGATTTCTTG
AAACATTTCTTTAACAGGTTCGATTTCTCATTTTCTAGTGATGGCTTGAA
TCTCAACCGAATCTCTAACTGACCGAAAGGTATATGGACAAAGATGAACA
AAATTTATGTATAAAGATGTTTAAATATAATTATGTTAATTTATATGAGT
AATATATCATTTTTACACACCCTTTTTTATTCCATTTTTGTACAGAATTT
ATGAtaagaaattgagaaagttGAAGAATCTAATCGTCAAAAATCCTGAA
TAAGTTATTGCCCAAAAAATCCTGATTCAAATCATCAATT Coding sequence (CDS) from alignment at sc0000074_pilon:1086816..1092955+ >MSTRG.10633.5.p1 ID=MSTRG.10633.5.p1|Name=MSTRG.10633.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4002bp|location=Sequence derived from alignment at sc0000074_pilon:1086816..1092955+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTGAGAATGGTTACCTCAACGCTGAAACTGCTGTTCAGAATCTGAC
CATCACCACATCTGCCAACACCACCACTAAGCCACAATTTAAACGTCAGA
AATCGCTAGATTTAGAGGAAGATCAGCAACGATCAGTTTCGCCATCATCA
TCACCAAAGATGTTCTCATCACCAGAAGGTAGCATCAATACAAACAGACG
TGATTCAAATGCCAGTTCTGATTCACAAAAAAGTGCTAAGAAACCAGCAT
CTTTGGATGAAATACAAGACCTGTATAGTGCTTTACAAGACTTGGTCAAA
ACGAACGTGAGTACAACACCGTTGCCAGAACGACGTACCAAGATGTTGTC
TCCATCACCAATGAGCAGCCCTAGGTTGAGTGATCGTTCATTAACAGTAC
CTGAGAAAACACTCAGAAAAATCTCCTCAAAAATCACACCGTCTTCTTCT
TTTGAGAAAGAACAATGCGAAGGAAGTCCAACGCCACGTTTGAAACATCG
AAGAGGAGTTTCAACAGGTACCATGGATTCTGTCATTAATTTAATGCGAA
TTTCACCGTTCCCAGGACGTAAATTTTCACACGATGTCAATACAACGAGT
CAAAAAGACAGTAAAAAATTATCCACTTCTAAAACCCCGAATATGGTCTC
CTCCAAGGCCGGTAAGAAAGAACGCAATAGTGGCGATCATGGAAAACGTT
GGAAAGGCTCCAAATTATTTCACCGATTGCGATCGAAAAGTAATGCCGAA
TTATCCGACAACGACGACAAATTATCAACCGACGACGAGGAATGTGTTCG
AGaaaaaaaCCGCCGAATGTCCGAAGCCGATGCGTTGAAATTGAAGCGTA
ACCGAGATAGTGGGTTAACACCACCGCAACGTAAAAGTTTACAAGAGGAG
AAAAACAAGGATATCGAGAATTTAGTTGCATCTTTAACCATCAAGAGTTC
TGATTCCAATTTGTTACAGACACCGAAAGAGACCTTTACGAACCCTTTGA
ATGAGTTAAATCAACTTGAGAGCTGGTTCGAAAAAGCATCCGTTGCACTA
AACCCTAACGTAGGACGTTATATCTTAAATGACGAGTCGAGTAGCGACGC
CGCTTCACCAAACGTACGTGCTAACCGATTCCGTAAGAAGAACGGTAACA
AACGTACTGGTCCGGGAATACGTAGAGCAAACTCTAACGTTGGAACGTCG
CACCGTAATAAGGAGGAACGACGCGCCAAAAGGAATAAAATGACGTCCAA
AAGTTTCGACGCAACCGGATTAGCGCACGCTAAAAGTACACCTGATTTAT
CCAAAACAGGTGTTGAATCAGAAGATATTTTAAACGATACAGGAATATCG
TATAAAGTTTTAGGACAATTAAATCATTTCACTGAAAATCGAGTGCGTGA
TTTAACACCGAAAGACAATAAGAAGGAATCGAAGAGAGTTTCTTTAGATG
CTAATTCAGTTAAACGATTACCTGACACGCCTTTATTCTATGTACCTGGG
GACGAAGAGAATGGAAGACTAAGCTCGAGTGAGttatcaaaaacatttaa
aaggcAGAAATCAGAAGGCTCAATGTTTTACACCGAGGAACAAAGCAAAA
ACGCTAAAAACTTATTATCTCCgcctgctgagtcagcaaattCATACGAA
AAGCCTCAAAGAAGTGAATCCTTATCAACTCCTAATAAATCGAATAACAA
AAGATCgaacaacaataaaataaagaacaaaacaaGACCCAAATCAATGT
TTGACTATTTTGATCAAGAAATCTTAGGGGAGGATCCTAACGATGAGGTT
TGGTCGTCCGAAGAAAAAGACATTGtacaacaaaacaattttgataATAA
CGCTAATTTTTGTCGAGCCAAAATCATGAATAATGCACACCGACTATCTT
TATGTGATTTGACCAAAACGACTGTGGTTCAAGAGAAAACTTTGTGGGAC
AAGTTCAGTAAAGTGGCAGCAAGCAAGAAAGCTAAAGCTTTGATGGCTTG
AATGTCTGAGAATGGTTACCTCAACGCTGAAACTGCTGTTCAGAATCTGA
CCATCACCACATCTGCCAACACCACCACTAAGCCACAATTTAAACGTCAG
AAATCGCTAGATTTAGAGGAAGATCAGCAACGATCAGTTTCGCCATCATC
ATCACCAAAGATGTTCTCATCACCAGAAGGTAGCATCAATACAAACAGAC
GTGATTCAAATGCCAGTTCTGATTCACAAAAAAGTGCTAAGAAACCAGCA
TCTTTGGATGAAATACAAGACCTGTATAGTGCTTTACAAGACTTGGTCAA
AACGAACGTGAGTACAACACCGTTGCCAGAACGACGTACCAAGATGTTGT
CTCCATCACCAATGAGCAGCCCTAGGTTGAGTGATCGTTCATTAACAGTA
CCTGAGAAAACACTCAGAAAAATCTCCTCAAAAATCACACCGTCTTCTTC
TTTTGAGAAAGAACAATGCGAAGGAAGTCCAACGCCACGTTTGAAACATC
GAAGAGGAGTTTCAACAGGTACCATGGATTCTGTCATTAATTTAATGCGA
ATTTCACCGTTCCCAGGACGTAAATTTTCACACGATGTCAATACAACGAG
TCAAAAAGACAGTAAAAAATTATCCACTTCTAAAACCCCGAATATGGTCT
CCTCCAAGGCCGGTAAGAAAGAACGCAATAGTGGCGATCATGGAAAACGT
TGGAAAGGCTCCAAATTATTTCACCGATTGCGATCGAAAAGTAATGCCGA
ATTATCCGACAACGACGACAAATTATCAACCGACGACGAGGAATGTGTTC
GAGaaaaaaaCCGCCGAATGTCCGAAGCCGATGCGTTGAAATTGAAGCGT
AACCGAGATAGTGGGTTAACACCACCGCAACGTAAAAGTTTACAAGAGGA
GAAAAACAAGGATATCGAGAATTTAGTTGCATCTTTAACCATCAAGAGTT
CTGATTCCAATTTGTTACAGACACCGAAAGAGACCTTTACGAACCCTTTG
AATGAGTTAAATCAACTTGAGAGCTGGTTCGAAAAAGCATCCGTTGCACT
AAACCCTAACGTAGGACGTTATATCTTAAATGACGAGTCGAGTAGCGACG
CCGCTTCACCAAACGTACGTGCTAACCGATTCCGTAAGAAGAACGGTAAC
AAACGTACTGGTCCGGGAATACGTAGAGCAAACTCTAACGTTGGAACGTC
GCACCGTAATAAGGAGGAACGACGCGCCAAAAGGAATAAAATGACGTCCA
AAAGTTTCGACGCAACCGGATTAGCGCACGCTAAAAGTACACCTGATTTA
TCCAAAACAGGTGTTGAATCAGAAGATATTTTAAACGATACAGGAATATC
GTATAAAGTTTTAGGACAATTAAATCATTTCACTGAAAATCGAGTGCGTG
ATTTAACACCGAAAGACAATAAGAAGGAATCGAAGAGAGTTTCTTTAGAT
GCTAATTCAGTTAAACGATTACCTGACACGCCTTTATTCTATGTACCTGG
GGACGAAGAGAATGGAAGACTAAGCTCGAGTGAGttatcaaaaacattta
aaaggcAGAAATCAGAAGGCTCAATGTTTTACACCGAGGAACAAAGCAAA
AACGCTAAAAACTTATTATCTCCgcctgctgagtcagcaaattCATACGA
AAAGCCTCAAAGAAGTGAATCCTTATCAACTCCTAATAAATCGAATAACA
AAAGATCgaacaacaataaaataaagaacaaaacaaGACCCAAATCAATG
TTTGACTATTTTGATCAAGAAATCTTAGGGGAGGATCCTAACGATGAGGT
TTGGTCGTCCGAAGAAAAAGACATTGtacaacaaaacaattttgataATA
ACGCTAATTTTTGTCGAGCCAAAATCATGAATAATGCACACCGACTATCT
TTATGTGATTTGACCAAAACGACTGTGGTTCAAGAGAAAACTTTGTGGGA
CAAGTTCAGTAAAGTGGCAGCAAGCAAGAAAGCTAAAGCTTTGATGGCTT
GA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000074_pilon | genome | sc0000074_pilon:1086816..1092955 + |
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