MSTRG.10585.7.p1 (mRNA) -

Overview
NameMSTRG.10585.7.p1
Unique NameMSTRG.10585.7.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000074_pilon:77737..79862+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10585.7.p1 ID=MSTRG.10585.7.p1|Name=MSTRG.10585.7.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2126bp|location=Sequence derived from alignment at sc0000074_pilon:77737..79862+ (Clytia hemisphaerica_ch_hm2_pilon)
TAGAAGCACACCACATAAATAAATATGGATGGTAACAAGGCAAGCCGAGC
AAACAAGATCGTTCAATTTGTAGCTGTTTTTATAGCTCTCCTGGCTCTCC
AGATTGGATTTGGTGCATATGGTGTTATCTATACTAAACTTGCTAAAGGT
GCAAAAACGACTGCTTTGGTTTTCTGTTTTTATCGTGATGCTGGTTGTAC
ACCTGTGTTGTTCTTAGCGGCTTATGTTGCTGAGAGAAGAATTCAATTCA
TAAAAACGAAAGGGTAAGAATTTTTGTATGATTCTTAATTATCTGGTTGG
CAACATTGATCAGCATAACATCaacataattttccttaaagTTTTACATG
AAAGAAGATTGGTTTCGAGTTTTACCTGGATCAAATAAATTCAAACGTCT
GAAGTCATTTACATTGGCACattcatattcatgatatgcaacactgcaat
gtcttctgacattacatcacggacccaataactgattggttgaaagtgac
gtaaaatcagtcaatatgtcacttgcaaccaatcagctgttgggtccgtg
gaaggcattgcatatcatgaatatacaCACTGAACTTGACGTCGTTTGAC
TGGTAGCTTCGAATCCAATCCTGTTTCAATGATAGTGTTGATATGTGCAT
ATCGCTGTCTCAAAAACTAACTTTGGTTTACACGTTGGTTAAGAAGAACC
AAgttcaaaaaatttgttgtgGGATGAATATAGAATTAATATCAGAAGCA
GAGGGACACGACCCTGGGTCCTACGCCCTGCGTCTTACTTTCAACCCCTC
AAAATTCCAGATAtttttttCGTTGTCCACGTGCAGTGGAAAGACAGCAT
cagttttttacatttttacattttctccaTGTATCAATTAGTCTTTATTA
AGCCAGAACCCCgtgttaaatcttttttttctcgtttttttagtgaattt
ctactgtttttcatcatgggattttttGGTATGTTTATCAATCAATTCTC
ATATATCCAAGGAGTTGTATTCACCACTCCTGATACTGCATCAATGTTCC
AGGCCTTAATTCCAATATTGGTCGTCATTGTTGCTATATTGGTGAAAAAC
GAACCGTTCCCAAAGATTAGAACCAAAACTGGACTGGCTAAACTCTTAGG
GATTTTATTTGCTACCGTCGGCGCCCTCGTAATGGCGTACGCCAAACAGA
ACGCCAAGAATAAATCAGATGCTGATAAAAATTTAACACCGCCAACATGG
TATGGATATTTGTTTCTGGTTTCGAATATAACATGTTCAGCCGGCTGGAT
GGTTGTTCAGAAAAAGTTCATCTTCAATAGAATGGATTCTAGATTCCGCG
AGTACCCTATAAACACTACAGCTTGGACATATTTCTCTGGTGCAGTATGT
ATGGGGTTTGCTTCAATCTATTACGCAGAAAAGCCAAGTGCTTTCGCTGT
AGAAAATCATAATGTCATATTTTGTTTATTATATGCTATCTTTATAACAT
CAGCTATGTGTTATATGCTTATAACATGGTGTAATATGCAAGTGAATTCG
TCATTTGTGGCAGCTACTTGGCCACTACAGGTGTTATTTTGTGCAATTTT
ATCTTATATCGTTCTTGGTGAAGTCATGGTTGCACTTCAAGTTGTAGGTG
GACTAATGATTATTGGTGCATTGTTGGCAGTGACTTGGTCAAGTTACACT
GAACAAATGTACTCACATAAACAACCTTCCTTAGAATGTCACGTAGAAGA
CGAGAACCCCTTGTTATATGCAGAATAGATtgtattaatttttaagtttt
atcgCTGTTGAAAAAGCTTATGATTCCTTTAAAAATTAACCAATGAACGC
GGTTAAAATAATTGATACTTTCTTGAGATTTACGCTTTGGCatcgttttt
tttattaacatGTTTGATGCTGAAAACTATTCTCAATGTCAATTCGAAGC
TGTGTGAAAAAATTAGCAATATCGTTTATTTTCAAATCTAGTTAAAGCTA
GGtttgaattaaatctttatttttatataattgtaatttgttttgaattg
aattttaaaaatttttattatatattatgcatgattttttgcacaaagtt
gCATAACtgtaaaccctcgaatgtga

Coding sequence (CDS) from alignment at sc0000074_pilon:77737..79862+

>MSTRG.10585.7.p1 ID=MSTRG.10585.7.p1|Name=MSTRG.10585.7.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2148bp|location=Sequence derived from alignment at sc0000074_pilon:77737..79862+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGGTAACAAGGCAAGCCGAGCAAACAAGATCGTTCAATTTGTAGC
TGTTTTTATAGCTCTCCTGGCTCTCCAGATTGGATTTGGTGCATATGGTG
TTATCTATACTAAACTTGCTAAAGGTGCAAAAACGACTGCTTTGGTTTTC
TGTTTTTATCGTGATGCTGGTTGTACACCTGTGTTGTTCTTAGCGGCTTA
TGTTGCTGAGAGAAGAATTCAATTCATAAAAACGAAAGGtgaatttctac
tgtttttcatcatgggattttttGGTATGTTTATCAATCAATTCTCATAT
ATCCAAGGAGTTGTATTCACCACTCCTGATACTGCATCAATGTTCCAGGC
CTTAATTCCAATATTGGTCGTCATTGTTGCTATATTGGTGAAAAACGAAC
CGTTCCCAAAGATTAGAACCAAAACTGGACTGGCTAAACTCTTAGGGATT
TTATTTGCTACCGTCGGCGCCCTCGTAATGGCGTACGCCAAACAGAACGC
CAAGAATAAATCAGATGCTGATAAAAATTTAACACCGCCAACATGGTATG
GATATTTGTTTCTGGTTTCGAATATAACATGTTCAGCCGGCTGGATGGTT
GTTCAGAAAAAGTTCATCTTCAATAGAATGGATTCTAGATTCCGCGAGTA
CCCTATAAACACTACAGCTTGGACATATTTCTCTGGTGCAGTATGTATGG
GGTTTGCTTCAATCTATTACGCAGAAAAGCCAAGTGCTTTCGCTGTAGAA
AATCATAATGTCATATTTTGTTTATTATATGCTATCTTTATAACATCAGC
TATGTGTTATATGCTTATAACATGGTGTAATATGCAAGTGAATTCGTCAT
TTGTGGCAGCTACTTGGCCACTACAGGTGTTATTTTGTGCAATTTTATCT
TATATCGTTCTTGGTGAAGTCATGGTTGCACTTCAAGTTGTAGGTGGACT
AATGATTATTGGTGCATTGTTGGCAGTGACTTGGTCAAGTTACACTGAAC
AAATGTACTCACATAAACAACCTTCCTTAGAATGTCACGTAGAAGACGAG
AACCCCTTGTTATATGCAGAATAGATGGATGGTAACAAGGCAAGCCGAGC
AAACAAGATCGTTCAATTTGTAGCTGTTTTTATAGCTCTCCTGGCTCTCC
AGATTGGATTTGGTGCATATGGTGTTATCTATACTAAACTTGCTAAAGGT
GCAAAAACGACTGCTTTGGTTTTCTGTTTTTATCGTGATGCTGGTTGTAC
ACCTGTGTTGTTCTTAGCGGCTTATGTTGCTGAGAGAAGAATTCAATTCA
TAAAAACGAAAGGtgaatttctactgtttttcatcatgggattttttGGT
ATGTTTATCAATCAATTCTCATATATCCAAGGAGTTGTATTCACCACTCC
TGATACTGCATCAATGTTCCAGGCCTTAATTCCAATATTGGTCGTCATTG
TTGCTATATTGGTGAAAAACGAACCGTTCCCAAAGATTAGAACCAAAACT
GGACTGGCTAAACTCTTAGGGATTTTATTTGCTACCGTCGGCGCCCTCGT
AATGGCGTACGCCAAACAGAACGCCAAGAATAAATCAGATGCTGATAAAA
ATTTAACACCGCCAACATGGTATGGATATTTGTTTCTGGTTTCGAATATA
ACATGTTCAGCCGGCTGGATGGTTGTTCAGAAAAAGTTCATCTTCAATAG
AATGGATTCTAGATTCCGCGAGTACCCTATAAACACTACAGCTTGGACAT
ATTTCTCTGGTGCAGTATGTATGGGGTTTGCTTCAATCTATTACGCAGAA
AAGCCAAGTGCTTTCGCTGTAGAAAATCATAATGTCATATTTTGTTTATT
ATATGCTATCTTTATAACATCAGCTATGTGTTATATGCTTATAACATGGT
GTAATATGCAAGTGAATTCGTCATTTGTGGCAGCTACTTGGCCACTACAG
GTGTTATTTTGTGCAATTTTATCTTATATCGTTCTTGGTGAAGTCATGGT
TGCACTTCAAGTTGTAGGTGGACTAATGATTATTGGTGCATTGTTGGCAG
TGACTTGGTCAAGTTACACTGAACAAATGTACTCACATAAACAACCTTCC
TTAGAATGTCACGTAGAAGACGAGAACCCCTTGTTATATGCAGAATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10585MSTRG.10585Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10585.7.p1.exon1MSTRG.10585.7.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10585.7.p1.exon2MSTRG.10585.7.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10585.7.p1MSTRG.10585.7.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000074_pilongenomesc0000074_pilon:77737..79862 +