MSTRG.10585.1.p1 (mRNA) -

Overview
NameMSTRG.10585.1.p1
Unique NameMSTRG.10585.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000074_pilon:69464..71130+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10585.1.p1 ID=MSTRG.10585.1.p1|Name=MSTRG.10585.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1667bp|location=Sequence derived from alignment at sc0000074_pilon:69464..71130+ (Clytia hemisphaerica_ch_hm2_pilon)
GGAAAAGCTCTATCTACCCTAATATACGATATCTATGGTGTATTACAATC
TAATCTCTTTAGATAAACACACCATATAAATAAACATGGATGGTAACAGG
GCAAGCCGAGCAACCAAGATCGCTCGATTTGTAGCTGTTTTTATAGCTCT
CCTGGCTATCCAGATCGGATTTGGTTCATATGGTGTTATCTATACTAAAC
TTGCTAAAGGTGCAAAAACGACTGCTTTGGTTTTCTGTTTTTATCGTGAT
GCTGGTTGTACACCTGTGTTGTTCTTAGCTGCTTATGTTGCTGAGAGAAG
GATTCTATTCATCAAAACGAAAGGGTAAGAATTGTTGTATGATTTCTTTA
ATGTGGTTGGCTATATCGATAAAACCAGTATAATAGCTGCATGTTTTTCG
TTAGATTTTCGTATGAAAGAAGATTGGTTTCTAGTTTGCCAGGATTGGAT
AAAATCAAACGTCTGAGCTCATTACATTGACACGTTCATATatacataca
cgcttttttttataagaataccttctataagaatatcagggtgaaaattg
gccaaatcgtaagaatacccaaaaaaaaaacagaaacccCGAATTAAAtc
gttttttctttcattttcagtgaatttctactgtttttcatcatggggtt
ttttggtatgtttATCAATCAATTCTCATATATCCAAGGAGTTGTATTCA
CCACTCCAGATACTGCATCAATGTTTCAGTCCCTGATTCCAGTATTGGTC
GTCATTATTGCTATCTTGGTGAGAAACGAACCGTTCCCAAAGATTAGAAC
CAAAACTGGACTCGCTAAACTATTAGGAATTTTATTTGCTACCGTTGGCG
CCCTCGTAATGGCGTACGCCAAACAGAACGCCAAGAATAAATCAGACGCT
GATAAAAATTTAACACAGCCAACATGGTATGGATATTTGTTTCTGGTTTC
GAATATAACATGTACAGCCGGCTGGATTGTTGTTCAGAAAAAGTTCATCT
TCAATAGAATGGATTCTAGATTCCGCGAGTACCCTATAAACACTACGGCT
TGGACATATTTCTCTGGTGCAGTATGTATGGGGTTTGCTTCAATCTATTA
CGCCGAAAAGCCGAGTGCTTTCGCTATAGAAAATCATAATGTCATCTTTT
GTTTGTTATATGCTGTCTTTATAACATCAGCTATGTGTTACATGCTTATA
ACATGGTGTAATATGCAAGTGAATTCATCATTTGTGACAGCTACTTGGCC
ACTACAGGTGTTATTTTGTGCAATTTTATCTTATATCGTTCTTGGTGAAG
TTATGGTTGCACTTCAAATTGTAGGTGGACTAATGATTATTGGTGCATTG
TTGGCTGTGACTTGGTCAAGTTACACTGAACAAATGtacttacaaaataa
acaaccTTCCTTAGAATGTCACGTAGAAGACGAGGACCCCTTATTATATG
CAGAATAGATtgtattaatttttaagttttatcgCTGTTGGAAAAGCTTA
TGATTCCTTTAGACAGCGGTTTTAATTTTCATACAGAAGCTCAGATAAAA
ATTAACCAACGAACGCGTTTTAAATAATAGATACTTTCTTGAGATTTACG
CTTTGGCATCGTTTTTTGTATTATTAACATGCTTGATGCTGAAAACTATT
CTCAATGTCAATTCGAA

Coding sequence (CDS) from alignment at sc0000074_pilon:69464..71130+

>MSTRG.10585.1.p1 ID=MSTRG.10585.1.p1|Name=MSTRG.10585.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2154bp|location=Sequence derived from alignment at sc0000074_pilon:69464..71130+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGGTAACAGGGCAAGCCGAGCAACCAAGATCGCTCGATTTGTAGC
TGTTTTTATAGCTCTCCTGGCTATCCAGATCGGATTTGGTTCATATGGTG
TTATCTATACTAAACTTGCTAAAGGTGCAAAAACGACTGCTTTGGTTTTC
TGTTTTTATCGTGATGCTGGTTGTACACCTGTGTTGTTCTTAGCTGCTTA
TGTTGCTGAGAGAAGGATTCTATTCATCAAAACGAAAGGtgaatttctac
tgtttttcatcatggggttttttggtatgtttATCAATCAATTCTCATAT
ATCCAAGGAGTTGTATTCACCACTCCAGATACTGCATCAATGTTTCAGTC
CCTGATTCCAGTATTGGTCGTCATTATTGCTATCTTGGTGAGAAACGAAC
CGTTCCCAAAGATTAGAACCAAAACTGGACTCGCTAAACTATTAGGAATT
TTATTTGCTACCGTTGGCGCCCTCGTAATGGCGTACGCCAAACAGAACGC
CAAGAATAAATCAGACGCTGATAAAAATTTAACACAGCCAACATGGTATG
GATATTTGTTTCTGGTTTCGAATATAACATGTACAGCCGGCTGGATTGTT
GTTCAGAAAAAGTTCATCTTCAATAGAATGGATTCTAGATTCCGCGAGTA
CCCTATAAACACTACGGCTTGGACATATTTCTCTGGTGCAGTATGTATGG
GGTTTGCTTCAATCTATTACGCCGAAAAGCCGAGTGCTTTCGCTATAGAA
AATCATAATGTCATCTTTTGTTTGTTATATGCTGTCTTTATAACATCAGC
TATGTGTTACATGCTTATAACATGGTGTAATATGCAAGTGAATTCATCAT
TTGTGACAGCTACTTGGCCACTACAGGTGTTATTTTGTGCAATTTTATCT
TATATCGTTCTTGGTGAAGTTATGGTTGCACTTCAAATTGTAGGTGGACT
AATGATTATTGGTGCATTGTTGGCTGTGACTTGGTCAAGTTACACTGAAC
AAATGtacttacaaaataaacaaccTTCCTTAGAATGTCACGTAGAAGAC
GAGGACCCCTTATTATATGCAGAATAGATGGATGGTAACAGGGCAAGCCG
AGCAACCAAGATCGCTCGATTTGTAGCTGTTTTTATAGCTCTCCTGGCTA
TCCAGATCGGATTTGGTTCATATGGTGTTATCTATACTAAACTTGCTAAA
GGTGCAAAAACGACTGCTTTGGTTTTCTGTTTTTATCGTGATGCTGGTTG
TACACCTGTGTTGTTCTTAGCTGCTTATGTTGCTGAGAGAAGGATTCTAT
TCATCAAAACGAAAGGtgaatttctactgtttttcatcatggggtttttt
ggtatgtttATCAATCAATTCTCATATATCCAAGGAGTTGTATTCACCAC
TCCAGATACTGCATCAATGTTTCAGTCCCTGATTCCAGTATTGGTCGTCA
TTATTGCTATCTTGGTGAGAAACGAACCGTTCCCAAAGATTAGAACCAAA
ACTGGACTCGCTAAACTATTAGGAATTTTATTTGCTACCGTTGGCGCCCT
CGTAATGGCGTACGCCAAACAGAACGCCAAGAATAAATCAGACGCTGATA
AAAATTTAACACAGCCAACATGGTATGGATATTTGTTTCTGGTTTCGAAT
ATAACATGTACAGCCGGCTGGATTGTTGTTCAGAAAAAGTTCATCTTCAA
TAGAATGGATTCTAGATTCCGCGAGTACCCTATAAACACTACGGCTTGGA
CATATTTCTCTGGTGCAGTATGTATGGGGTTTGCTTCAATCTATTACGCC
GAAAAGCCGAGTGCTTTCGCTATAGAAAATCATAATGTCATCTTTTGTTT
GTTATATGCTGTCTTTATAACATCAGCTATGTGTTACATGCTTATAACAT
GGTGTAATATGCAAGTGAATTCATCATTTGTGACAGCTACTTGGCCACTA
CAGGTGTTATTTTGTGCAATTTTATCTTATATCGTTCTTGGTGAAGTTAT
GGTTGCACTTCAAATTGTAGGTGGACTAATGATTATTGGTGCATTGTTGG
CTGTGACTTGGTCAAGTTACACTGAACAAATGtacttacaaaataaacaa
ccTTCCTTAGAATGTCACGTAGAAGACGAGGACCCCTTATTATATGCAGA
ATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10585MSTRG.10585Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10585.1.p1.exon1MSTRG.10585.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10585.1.p1.exon2MSTRG.10585.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10585.1.p1MSTRG.10585.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000074_pilongenomesc0000074_pilon:69464..71130 +