MSTRG.10577.11.p2 (mRNA) -

Overview
NameMSTRG.10577.11.p2
Unique NameMSTRG.10577.11.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000073_pilon:1470970..1478753-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10577.11.p2 ID=MSTRG.10577.11.p2|Name=MSTRG.10577.11.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7784bp|location=Sequence derived from alignment at sc0000073_pilon:1470970..1478753- (Clytia hemisphaerica_ch_hm2_pilon)
TTGCTTCATATCATTTGGATTTAATAGTTCCTGGCTTGTATGATGATTTT
GCTACGTAGCAAGGTCAAACGGTTAAGTGGGATTTATTCAATATAATGTT
TTCCATATAAAAAGTCTTTAAATCATCCTGTTCGATGACATTGAATTGGA
ACAAGATTGCTGTCAACCTGTTACTAGTGACTGGGAAAAGTGAAACTGGA
ACATCGAAATTCAAAGGTGAGTACTTTCGAACTCTATTTTACCAATTTTC
GACAAACGTCTGGCAGCAATATACACCATTGATGGTATTTGTTTTTCATT
TCAGATATCCGTTATCAAATTTGACCGGATAGTGATCGAGACAAAATAAG
GCATATTCATATTAGGTGAGTTTAGATAAACACTTAACAAAGGAAATTGG
CATTTCTTTAATGTAGCGCGAAATTGTTATTGTTTTTGTTGAATTTTAAA
AGTTTTTGCGGTTTATCACTTTCGCAATTTCATGCTATCATTTAAGTACG
GAAAACTTTTGCATTGTTCATTTACTATGTAGTTGATATGGGATAAGCTC
TTCAAAAAAACTCCAATTCTTATCTTGTTCTAATCAAGGGGAAGATCTGA
GGGTGCTTACCCTAACTCTCTCATGGTGAGATCAAAAGGGGAAAAAAGAA
GAATTTTTTAACAGTTAAAGCCATCATAAAAAGGCGTCCTTTTTGTTTTC
ATTTTCTCACTGCGTGATCTCGCACATTGATGGTCGAATATAATCAATAA
GAAAAATCCACAAGAGAGCTCCCTATTCGTTGCACCTGCTATGTATATTA
TGAACCAATTTCTTTAATCATCAATTTTGTATGAGAACCAGTCAGAGAAG
ACTCTTCCTTCCTTAAAAATCTTGTTTTCATCGACACCACCTTATGATCT
ACCATTCTAATTTTTGTTCAATTTCTTCTTCATTTTTCTCTCTCATGTCA
ATATTTTTATTTTATTGTCTTGTTCATTTGATTGTCGAATGTTTTATTAT
TTTGTTCATCACCTTAACTAAAGAGGATTGCTGCTCATAATTCCTGACAG
TAAAGTCGCTCCTTTGTTTTGCCGGGGATGAAAACTACTTTAACTGCTTC
TGGTCACCCTCTTTTCTCAGGAGAAGAGAAAACCTCAACGAATTACTTTT
TCCATCCATTGTTTCTTCATTTTTTAATAATCGTATATCCCTCAGAACAT
AATAAAGCAGCTGGTCAAACCCAGAGACATCTTACAAATTTCAAAACAAT
GTAGCGTTGTTACAAATGGAGAAAGATTATTCCGTGATATACTATCAAGT
CGTTTCATGTACATCTCATTAAAGAACAGTGTAGTATTTTCTTCTGATTA
ATACCTTGTCATGTTTCACCGTATGTTATTAATGAGCTCTTCAAATACAT
AGTTAATTGACAGATAATTAAGTTGGTTAATTGATACCCATTGCTTTTGA
ATGAAGATCCCTTGTTGTGATATTATGGGAACAAAATACGGTCAGGTGCA
GGAAGTAGATCTCATTTAGATCATATTCTCTCGCATGGTCGGCTGGATGC
AGTGCTCTATCTTCGATTGTTGTACATACATAGTTTTCGTTCTGTTTGCA
TGAAGGATTCTTGTGTTGTGATAACAGTCTTTCAATGATGGTGTGATTTG
CATTTCATATTTATTTGCGATGATAGCTTTCCCTTTGCCTATTTGAAATG
TACTTTGTCAACAATAAGACTCAGGGGAATCTTTTCATTTATTGATATTA
AGATTTTGGTTGGGGTTCTCTTGCTGTTGTCTGTTTGACTGGTGTACATT
ATGTAATGACACCCCGACGTGTGCTTAGTAAGAGGTACCTCACTGCGATT
TTACTCTGTTAATAAGATTGTTTGGTACTCTAACGACCTATGATCTCTTT
GGAATTTGCACTCTCAAACTGTGCTTTACAATGGAAGGATACTGTGAAAT
TTAAATTGATGACATTGAATTATTTTCTTCTGGTTCCTGATGTTTTTGTT
CATTTCGTCATTTTTCTCAGATCTGTTTTTATTGTCACTTCAAACAATTT
TGTCTCTCTAAACATCAGTTTTTAAAAACCTACTCGACACGGTTTTAAAA
GCATACATCAGTCAGTTCACGAGAAAATCACAGAAGGTCAGTCCGGAAAT
TTTATGCTGAATTATTATCATCTGACTTCCTTTTAATTTTTGTCTATTTC
TCTTTAAAGCGAATAGATTACAAGCAGAATCCATAGACAAGCTATTTTGG
AAACAGGTATGTTGATTTTTGTTCTTATAGATAGTACAACATGACATCCC
GATATTTTGAAGTTGTCACGGATCACTTCTAATTATATAGGAAAGTTGGT
TTCTTTGAAAACTTTTGTCATAAGTCTTTTTCTTACAATCATTATCACTA
AGACTTTGTGAAAAGTTAAAAAAAATCTTTGGGTTAGTTTGTTGATGTAT
CAAAAGACAAGTGTAAAATGGATCAAGTTCCACAAATGAAATAAGAGATC
GATCATTTCTCTTTAAGTAAAGAAAGCTCCAATCATAATCTGTCATTATA
ATCAAGAATATACTATTTTTTGCCGTCATCAAATAAGACTTATATCTCGA
TCAAAAGTATCAGTTTAAAAAGAACAGATGTCATTCTACACTTTGTTTCT
CTAGGCTGATTATCATAGTGGAAGTCATCATGTGCCGTCATTTGGTTGTC
TACATTTTGCTCGTTCTGGCTTCTCTCTACCGAAGCACACACTCAGCTGG
TACTACACCTGGTATTAAAGAAGTCTTTATCGGAAGATGTTGGCAATATC
AAAGCATCTCTGAACATAACAAACTACCTGAATTAAAAGTGAACATAAAC
TGTACAAAATTATGGCTGGCTTTTTACGATTCGTTCGCTTTCAAAGATCC
TTGTACTGTTGGGGTAGATGATTACAAGACGTTCTTTGATATGTTACATA
CCTCTCGAAAAATCAAGAATGCTTTGTTTTGGTCTGGTTTGCATGACTTG
GTAACTGACTTCACCTTCATAAATGATGATTACATTGTACTGGAAGATAC
ACTTACAGGGTAAGTTCTCCATATGTACCATTTGAACATCACTTTCAAAG
AAAGATTTATTTTGTTAAAAACTGTCCCTTCCCAATTAGCTCGTACAGCA
TCGCCCATTTTTCTGTTATTTTTTATGTGAAACTTTCAGGTACCTGCTAA
ACAATCTTAACTGGTGCGGTGGAACGGACGCAGATGGACTAAATTCAACA
TCTTGTTCGAAAACGTGCAACGTTATGACACCTGCTTGGACATTGGCATC
TTCAGAGGTACGAGGTATGTTTTTACCATCGTAAACCTTTTCTTTGTAGT
CTAAATAGAATAGTGCTCAGTACGATTGGTACATGAAAAGGAAATTACGT
CAAAAAGTTTTCAGCCAGTAAATTGTCTTCGGATTTTTTTAGACTCTGGA
TGTTCGCTTACATTGAAAACCGACATATTGTTAATTGGTTTTATTTTTAT
TAATCCTTTTTTCAGTTCGCTAAACGATCAACTGAAACAGCCAAAGTTCT
CTTGAACGCGACACGTGCTAACAACAAAGACGCGTATGCTGATGGCAGGT
TTGTCCGTTTTTCTTGTTCTTTATCCGCAGAAATATTTGATTTTGCTTAC
TACCATCGCAACAGACAGTCTCTGACCTCCTCAATCCTATTAACCCTGAT
TATCGGTTTCTACGTAGACAGCTCTATATGACGAGGCTTTTTGCCAAAGA
GATTAAACTTTCATTATTTTTCACTTTCGATTCTTGTTTCAGTTTCTTCC
GAACCGTTGAAATGCCAGAACTGCAAGTGGATAAACTTGTTGTATATTTA
GCTTCCAGTATTGGTAAAGAGGTCAGGTACGTATTCTTAATTTATTGAAT
TTTGACTTTCTTGGAATATATCCAGGAGTTGGTTGTAAAGGGAAGGGAAG
GATTTTTAGAATTCTTTGTTTTGTCTCCATAGCATAGATATCATTACACT
TTAATTATTGGAAAATTAGTTTTTGCTACCCACAAAAGGAAATTGACCTC
TCATTAAAACCCTTCATGAACATTCAAAAAACAAATTATGAAAAGCCTTT
ATTTCTAAATTTTGCCATCTGTTGTAAGGTTATATAATGATCAGGCTTAA
TCAAATGACCAATCGACGTCAATTTCTGAATGAATTTTTGCGATGCTAAA
CTGCTTCCTGTTTTGTATATAATGTTAATTCAATTATTGAAAAAAATGAA
AAAATCGATTTTATTAAGATTAAGCCTCTTTTGGCTTACGTTGTAAGGGG
GAGGGCTTTGTGTTATTGCGAAATCCTTAATCCCATGTTCGTTTGAGATT
CTGTCGCTGAATCCTACAACTTCCTGTCTTCCAGAATAAAAAACAATACA
ACTTTTGAGGGTAGAACTGTTCATTTTCTCTTCAATACTTGAAGTCACAT
CTTACAGTATATGACATAATAAAAGTTTGAATTCTTTCTCTCCAGGGAAA
GATGTGCGGATTCGATTTCGATGGAAAATATACGGGCTGATGCGGAAGCT
AAGAATATCCAAGTGGAATGTATTGATCAACCAAGGTAAATGTCTGACGA
ACCTCTTTCTTGAGTGTTGAAAGCAAATACCTTTCCTCAATTTAACACCC
TCTCTAACCTTAAGTACTTTGAAAGGTGTTCCTTGGTAAATTTCATTCCA
TTACAAATATCATCTCTTGCTTTCTTAAAAAACTTTCATTCGAAAAGACT
TCTATCTTTATTCTTTGGCCAGGAAATGTTAGTAATTAATAAAGAACATT
TTCGACATTTTTTCACTTCTTTCCTTCTTCTGACTGCCCATACATCATGT
CTTTAATCGCAGATTTCCTTGCCAAGATTTGCAACTTCTCAATCGAAATC
TTTAATGTATTTATAGTTTTCAAAGCAACAAAAAAATTTCTATAGCACAT
AATAACACCGACTTTATTGATACTGAACTTCAGGAAGTCGGTTTTAACTA
TCACATTCACTTTCGATGGTTGTCCTACAAGAGCTTGTGAAAATCCTACT
AAGTTTTTGAATATCTGTTAAGATCGCTTCCCACTCTGCTTAAAGCTTTC
TTCTACTAAATAATTAAGCATCGCACGTTGTTCAACCACTAAAAAAGCTG
ATTGGAAAGCAAACTTTAGTAGTAATTCTCCTAACGCCTAAAATTGAAAG
GGACATTAACGTTTAAGTCTACCTGGAAATTCTATGAAATGATTTCATGA
GAAAATCACTGAGGGCCACATTTAATCGGATTTGCATATCCAAAAATACC
CATGCCACTCTCGCATACCTCTCAGATCAACATTTTAAAGCTAACTGCAC
TCAAATGCCCTTATCCTATCCACTTTCAGCCTGGTACTCAATGTTTATTG
TTTGAAGTACCCAAAAGCCAAAGAATGTGTCAACAAGGATAACTTTCGAA
GCGATTCAAACGCCGATAAAGAAGAAGCTAGGTAAGCAGTAAACCTTTTA
CGGGATTGACTTCTAAGGGCCCTTGCATACATCATCAATTTAGTAATTGA
AACCGCTCTCACTCCCAACTTGGACTAGCTGCACATATTTGAAGTGTTTT
TAAAGTGCCTGACTTGGACTGGTATTCATATTACAACAATTAAAAGAGGA
ATTTCAAGAGTATTGTTAAACAAGTTTTGTCCTTGTTTAAACGTGTACCT
CTTGACAATCCACGGAATTTAAAAGCAATCATTGATAATATGAAAGAATA
TATACCTTATTATGGTCCATTACATGAATCTATCCCATTTTTGATCTCGC
TTATCTATATGTCATGCAATTTCATCATCTTATAAACGATTCAACTCAGG
ACATTGAAATTGGTGACCATCATTTTATCAATCACTCTCTTCGTTACCTT
CCTGGGCTGTGTACTGTTGTTAGCCTTCCATCATCGTAAAACTATTCGCA
AAAGAGCACTAAATCAGAAACATAATAATAAGACCACAGAAATAACAATT
CAAATGAACTTTTATCAAATGAACCAAATGGAAAAACAATGTGGTTATAG
TTTCATGTGGTGTTCATGACGCTGAGGTTATGCATGTCCTCCTCACAACC
TGTGTCTTAACCTTCCCTAACCTCCATGCACCTTGTAGTTTACACTCGAT
TGTTCGAACCTACCCTGTCTGCCCTTTTTAGCATGTTCTGTTTGAAAATG
ATGTGAGATAGCGTTTCAAAGTCCCGTGCTAACTGGGAGAGGAAGAATCC
CCTTCGCTATTTCTTTAATTTCAATTTTTGAATCAACTCGCACTGGATTT
TTTGAAGTTGAAAGATATTGATTTCGAAATCTGAAGCTAATGAAAGACTT
TCCTTCCGTTTAATCATGCCCTTTATTTCTCAACCCTTTCTGGGTAAAAA
CATGGTCTATGGGGCATGGGTGTCAACGTAATGACGAGTGCATGAATCGG
GCTGTGAAGCCCTTTTTTTAATTGTTAATGCATTCATTTTCATTCATTGT
TATGTATAGGAAGTGGATGATAGTTGGTATTGTGTTTTGCACACTGTTTG
TTGTCTTCTCTCTCACTGCACTCATTGCATGGATCCTCAAACATAAACAA
TCCAAACATCGAACTGCTGTCCAAATGACCAAAAGTGGTGAAGTCATCGC
TAACCCTCAAACCATTAACAACAATGTCTAATTCCCTACCCCTAACTACT
TACTCACACTCATAATATTCATTTTGGTGTAATTTTTATAATGATTTTGT
ATGGGAGGGTTTGATTTTTTACAAGGTTTTTTTATATTTTGATAATAAAA
TGGTGTTTGGTGTAAGTCTATCAAATTATATTTTCATCCTTTCGAATTTC
GAGTCGTTAGCTAATATCTTCCATTCGTTCACTCAATATCGTGAACATCA
GAAATTAGACAAATTTTTGCTTTAAAACATCGAGTTTAATGAAGCCAAAA
AGTTGACTCCTGCACTTTTATTGTTGTTCAAAAAATGATGTCATTGTTGA
GCTTATCAACAATCATCAAGCCTGATAGCTTTCAAAAAGAGTCTTTTCCA
AATATTGGTAAGGGAGGGAGAGAAAAAACAATCGGGGCTTGGTCAAGGAA
GGCATATTGAATTAATTCCTAATCATTAAACCCTGTGTGCATATTCAAAG
TTAATTGAGTACTTATGATCGACTAACATAAACTTTTTGGGACTAATTTC
TCACACAGGTTGTGGAAAACCGTTTGTTTGATTTTGGTAGCCGTGGTGGC
TGTTCTAATCGTTTACATCACGATCAGTCTCGTGCACCGTGCAGTGTGTT
ACAAACCGGGTGATTACAAATATTCACATAGCTGGTCTTTCTCAAAGAAA
CCCATGCTGCAGGACGATGAGGTAGAAAATAATAACGATATTGAACGTGT
GGTGTGAGACCTGCTTTGTCATAAAAAGGAAAACTGCAACAGTATATTAA
CCTGAAGTTATGGTTAGTTTTTGGCAGGAGATGACAGGTGGAGGATGGAG
GGTTCTACTTCGCGTCACTAAGCCCACCGCTGTATTCACCAGCCGTCAAA
AGATATCTAAGAGAACAAGTGCTCTGTATTATATGACGGAACGAACACTT
TACCAAGAGACATTCAAGTTATGCAATGTTAATTATAATTTGATTCACAA
TTTTTCTGACAAAAGAAGAAACTGTGCATAAAGATATTTTAAATATCCGG
GATTTCAGTTTATTCAAGCTTCTTTAAAGTATTGTAAAATTAGATGTACG
ATTTATTAAGGTAGAAATATTAATGAAGATTTAT

Coding sequence (CDS) from alignment at sc0000073_pilon:1470970..1478753-

>MSTRG.10577.11.p2 ID=MSTRG.10577.11.p2|Name=MSTRG.10577.11.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1098bp|location=Sequence derived from alignment at sc0000073_pilon:1470970..1478753- (Clytia hemisphaerica_ch_hm2_pilon)
GTTGTGGAAAACCGTTTGTTTGATTTTGGTAGCCGTGGTGGCTGTTCTAA
TCGTTTACATCACGATCAGTCTCGTGCACCGTGCAGTGTGTTACAAACCG
GGTGATTACAAATATTCACATAGCTGGTCTTTCTCAAAGAAACCCATGCT
GCAGGACGATGAGGTAGAAAATAATAACGATATTGAACGTGTGGTGTGAC
CTGGTACTCAATGTTTATTGTTTGAAGTACCCAAAAGCCAAAGAATGTGT
CAACAAGGATAACTTTCGAAGCGATTCAAACGCCGATAAAGAAGAAGCTA
GATGGAAAATATACGGGCTGATGCGGAAGCTAAGAATATCCAAGTGGAAT
GTATTGATCAACCAAGGTTGTGGAAAACCGTTTGTTTGATTTTGGTAGCC
GTGGTGGCTGTTCTAATCGTTTACATCACGATCAGTCTCGTGCACCGTGC
AGTGTGTTACAAACCGGGTGATTACAAATATTCACATAGCTGGTCTTTCT
CAAAGAAACCCATGCTGCAGGACGATGAGGTAGAAAATAATAACGATATT
GAACGTGTGGTGTGACCTGGTACTCAATGTTTATTGTTTGAAGTACCCAA
AAGCCAAAGAATGTGTCAACAAGGATAACTTTCGAAGCGATTCAAACGCC
GATAAAGAAGAAGCTAGATGGAAAATATACGGGCTGATGCGGAAGCTAAG
AATATCCAAGTGGAATGTATTGATCAACCAAGGTTGTGGAAAACCGTTTG
TTTGATTTTGGTAGCCGTGGTGGCTGTTCTAATCGTTTACATCACGATCA
GTCTCGTGCACCGTGCAGTGTGTTACAAACCGGGTGATTACAAATATTCA
CATAGCTGGTCTTTCTCAAAGAAACCCATGCTGCAGGACGATGAGGTAGA
AAATAATAACGATATTGAACGTGTGGTGTGACCTGGTACTCAATGTTTAT
TGTTTGAAGTACCCAAAAGCCAAAGAATGTGTCAACAAGGATAACTTTCG
AAGCGATTCAAACGCCGATAAAGAAGAAGCTAGATGGAAAATATACGGGC
TGATGCGGAAGCTAAGAATATCCAAGTGGAATGTATTGATCAACCAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10577MSTRG.10577Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10577.11.p2MSTRG.10577.11.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10577.11.p2.exon9MSTRG.10577.11.p2.exon9Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10577.11.p2.exon8MSTRG.10577.11.p2.exon8Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10577.11.p2.exon7MSTRG.10577.11.p2.exon7Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10577.11.p2.exon6MSTRG.10577.11.p2.exon6Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10577.11.p2.exon5MSTRG.10577.11.p2.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10577.11.p2.exon4MSTRG.10577.11.p2.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10577.11.p2.exon3MSTRG.10577.11.p2.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10577.11.p2.exon2MSTRG.10577.11.p2.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10577.11.p2.exon1MSTRG.10577.11.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000073_pilongenomesc0000073_pilon:1470970..1478753 -