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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000073_pilon:1436476..1439965+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10573.1.p1 ID=MSTRG.10573.1.p1|Name=MSTRG.10573.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3490bp|location=Sequence derived from alignment at sc0000073_pilon:1436476..1439965+ (Clytia hemisphaerica_ch_hm2_pilon)
CTGCTTTCAATAATCATGTCTAATACCTTtaatttctttgatgtttttta
gattaaacaattaaaaaaaacaatacttaAGAATGTAGGGAAAATGGTAT
ATCTAATAATCTTTGTAATCCTGGTGGCAGTTTATCCTTTTGAAACTGTT
GGTCAGAAACAAGCATGGTCTAATGTTGTGGCAAGCACATGTAAATTCAC
TGTGAATCATGACCTGGATATTCGATTCGAACAAAACCCCTTGCTGTTCA
TCGATCGATTGACTGAACCTGATGTCAACAGTTGTCGAAAGCAATGTTGT
GACCACAAAACTTGTAATAGCTATGTGTGGGATGCATATGATCGAGTGAA
TGGCAACTGCAAATTATTGAAGTGTTCAGATGAAGGGACAGATTGTAGGA
ATGCTTTGACACGAAGAACAAGTGTTGGAGAAGATAGAAGTCAACACGAA
GTGGGCTTTATCACTGGCGTCACTGATAACACAACGCCCAGTAAGTCCAC
TGGTTTTCTCAGTAACTCATCAGGGGGGTTGGTACTAAGTTGTGGGGGCC
AGTGACGGGTGGTGGTCTgataaggtaagtaaaaaacaacttagtacaTG
GTACTAGGTGGTGGCCctaattaagaaaaaaaatttgcaactttgtatca
agggactaaatggtggtctcaataccaaatatgaggcatcaagttagtat
ctggtactcaaaatcctgcaaaatcacaaaaaatgttcttttactgttat
tttactaccctggtagtaaaagtttttgggacaatttgtcatggagacca
cctattttttagttgtttttcggactgattttacaaaaaaagctaaaaaa
tgattatttctgtgacacatttttcacttagtgcaatcaatgttttttcc
ttagaattaaagttttttttatattgacaaaagatttcgagaatttttgg
tttgcagcaaacaactttccaacagaaaattttttcaaattataaaaatt
ttcacattttttcagaaaagtcatccaaaaaattaaaagaattacaaaaa
tagctaaaatttgctaattttaccagttttaactacccaggtagtaaaac
tttttcaacatttaacacatagataccacccattttagtatttaactacc
ctgggtagtaaaatcttttttcgatttttcatcaCACCACCGTCATTATG
TCTTAGATTTTACTACCGCTGCTTGAAAATGTTATTCGACTTGACATATC
TTGacaggaatttttcctgagtTATTTTAAAGGGTGTTACAGAGTGGTGT
agtatattttttaatacagtgttgtaaagttttttagaaaatttaaagga
ggtGTACCAGAAAGTACCAGAAACCAAAGACCAGAAAATAAATTACTAAG
AATTAAAAGCTaaagggtggtatacctattttgagGGGGAAAATCAATTT
AGTACAGGGTACTTAACGGTGGTGTGTCATTTCTCAATGGTGATTTCAAG
ATTGTACTGGGTATTaaggggtggtatacctattttaaggggtaaattct
ACGTGGTctcagataaatttcaaaaaacaagaaagtacaacttttcggca
ctggtccagtaccacaacttggtaccccccccctAATCCCATCTAAATTA
ATACTCTATTCGTTCATATGTTAACCATTCTAATTTCTCATTGCCTATTC
ACGCCTaaaaatttgagatttaaaTTCTCTTGCAAAAATCTCAGAAGGAT
Cattacttaaatttatatatcttttaaagatttaatttttaatgtatttt
tatttCAGATCCTTTGGACGCTGTGTTAGGCCCTCAACCCACTCCGAAAA
CGACGACCTTAAAAACGAATTCTCCACACATGAATCCTTCATCTCAAGTA
AAGCTGGATAATCTTGTTACAGATACACCTTTTTCAAGAAAGCCTCTCGC
ATCTTCAACAACTACGACCAAATATGTCCCTTCGATAAAAGACATGGCGC
AAAGGCCATCTACAACGACCACTACATCAAGTACGACATTCATGAGATCA
GCAATGAGCACTATCAAACCAACAACATCAACTAAAACTTCCACAGTAGT
GACACCTgctgtgagttttttttttctaattcacgATATACGTCTCGCAT
GATTACTCCTTTTTTCCTATCAGAACCATATAGACCAAAAAACTGGAATT
GATTTCTATTAGAggtgaaattttatgacttttatcTTTTGAAATCATCT
GCAGATCGTCCAAAAACTGAAAGCCTTAGAAATCGCCAAAGTAGTTAAAT
ATGTAAGTTGATGTATTCAAAGTCTTTTAATGTctattttgattaaattt
taaagtacaccttttcttttactttacaGCCAACAATAATGGAATTTTTA
CAAACGAACCAATCAACAACAGATTTACCATCGACCAGTATGTTTTCCTT
CTCGTGCTCTCTTTTCTCCATTTACCTTTAAAACTTTCATGGGCTCCCTC
TTGTTTGCGAATCAGTCAGGCTTGATTTATTGATGTTTCGGTTGGttgaa
tatattttaaataaGTTGATGTTTTCGTGATAAATTTTGTCTTCGTCAAG
CATTAAAGTGAATTTCCAATGTCACGTGACTCGTCATTAGAGACTTCAAA
GGCTAAAAATATGCTCAAGGTAAAAACAAACTCAAATATTCACGGCCAAT
GTTTTATGTTTTAGCTCCAAAGAAGACGCATATTCGTACGAAAACACCGA
AGAACGTAACCAAGTCATCTTCAAAGGGGGTCATTGAGGCAGGAAGTGGG
ATTTCTCATTCTGATAACATCTCTTTAACTGGTGCAGTTTTCTTTGGACT
TGCTTTTTCCTTTGTGACCATTTATTTAGTTGGTAAACGGTGGATAGAAG
GACTTCGAGAATCTAAAGGCAGGCGTGGTTACACCCGTATTTCCTATCTT
CTAAATGGAGTTTGAGTTTCGATATTCGTTTGAATATATTAGGTTTAATA
AGTTAGGGTTTGTAGATTTCGATATTCGTTTTTGAGTATCTGTTTTTTGG
ATATTTATTGACGTTTGTAAATATAACTTATGTTGGAGTAAAATGCAATA
AGTTCTCATCAAATTACATCACAAGTGTTTCAAGGAACAAAATTTTGACA
CCCTGACTTCTTTATTCGTTCTCAGTTAGGGGAGTTCTAAGTATATATAG
TTAATACACTATTTTTGGAGACTCTAGAAAAAACTTTCCTGATTATTTGA
CTTAATTAGGTTTGCTTCTCCGTTCTAGGTGTTATATTTTGATGATTGTT
ATCTATAATCATtcttaatatttaatttttggtTGTACATGTTTTCTTTT
ACCTTGCTTTATTTATTTTACTTGATTAAACGAGGGATAATTTCGTAATA
TTAGCGTCTTATATACATTATTcacatcatttttgaaattatgcatTTAA
GAATGGTATTTTGTACAACttgataaaaaatatgaaagag Coding sequence (CDS) from alignment at sc0000073_pilon:1436476..1439965+ >MSTRG.10573.1.p1 ID=MSTRG.10573.1.p1|Name=MSTRG.10573.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4032bp|location=Sequence derived from alignment at sc0000073_pilon:1436476..1439965+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTATATCTAATAATCTTTGTAATCCTGGTGGCAGTTTATCCTTTTGA
AACTGTTGGTCAGAAACAAGCATGGTCTAATGTTGTGGCAAGCACATGTA
AATTCACTGTGAATCATGACCTGGATATTCGATTCGAACAAAACCCCTTG
CTGTTCATCGATCGATTGACTGAACCTGATGTCAACAGTTGTCGAAAGCA
ATGTTGTGACCACAAAACTTGTAATAGCTATGTGTGGGATGCATATGATC
GAGTGAATGGCAACTGCAAATTATTGAAGTGTTCAGATGAAGGGACAGAT
TGTAGGAATGCTTTGACACGAAGAACAAGTGTTGGAGAAGATAGAAGTCA
ACACGAAGTGGGCTTTATCACTGGCGTCACTGATAACACAACGCCCAATC
CTTTGGACGCTGTGTTAGGCCCTCAACCCACTCCGAAAACGACGACCTTA
AAAACGAATTCTCCACACATGAATCCTTCATCTCAAGTAAAGCTGGATAA
TCTTGTTACAGATACACCTTTTTCAAGAAAGCCTCTCGCATCTTCAACAA
CTACGACCAAATATGTCCCTTCGATAAAAGACATGGCGCAAAGGCCATCT
ACAACGACCACTACATCAAGTACGACATTCATGAGATCAGCAATGAGCAC
TATCAAACCAACAACATCAACTAAAACTTCCACAGTAGTGACACCTgctC
CAACAATAATGGAATTTTTACAAACGAACCAATCAACAACAGATTTACCA
TCGACCACTCCAAAGAAGACGCATATTCGTACGAAAACACCGAAGAACGT
AACCAAGTCATCTTCAAAGGGGGTCATTGAGGCAGGAAGTGGGATTTCTC
ATTCTGATAACATCTCTTTAACTGGTGCAGTTTTCTTTGGACTTGCTTTT
TCCTTTGTGACCATTTATTTAGTTGGTAAACGGTGGATAGAAGGACTTCG
AGAATCTAAAGGCAGGCGTGGTTACACCCGTATTTCCTATCTTCTAAATG
GAGTTTGAATGGTATATCTAATAATCTTTGTAATCCTGGTGGCAGTTTAT
CCTTTTGAAACTGTTGGTCAGAAACAAGCATGGTCTAATGTTGTGGCAAG
CACATGTAAATTCACTGTGAATCATGACCTGGATATTCGATTCGAACAAA
ACCCCTTGCTGTTCATCGATCGATTGACTGAACCTGATGTCAACAGTTGT
CGAAAGCAATGTTGTGACCACAAAACTTGTAATAGCTATGTGTGGGATGC
ATATGATCGAGTGAATGGCAACTGCAAATTATTGAAGTGTTCAGATGAAG
GGACAGATTGTAGGAATGCTTTGACACGAAGAACAAGTGTTGGAGAAGAT
AGAAGTCAACACGAAGTGGGCTTTATCACTGGCGTCACTGATAACACAAC
GCCCAATCCTTTGGACGCTGTGTTAGGCCCTCAACCCACTCCGAAAACGA
CGACCTTAAAAACGAATTCTCCACACATGAATCCTTCATCTCAAGTAAAG
CTGGATAATCTTGTTACAGATACACCTTTTTCAAGAAAGCCTCTCGCATC
TTCAACAACTACGACCAAATATGTCCCTTCGATAAAAGACATGGCGCAAA
GGCCATCTACAACGACCACTACATCAAGTACGACATTCATGAGATCAGCA
ATGAGCACTATCAAACCAACAACATCAACTAAAACTTCCACAGTAGTGAC
ACCTgctCCAACAATAATGGAATTTTTACAAACGAACCAATCAACAACAG
ATTTACCATCGACCACTCCAAAGAAGACGCATATTCGTACGAAAACACCG
AAGAACGTAACCAAGTCATCTTCAAAGGGGGTCATTGAGGCAGGAAGTGG
GATTTCTCATTCTGATAACATCTCTTTAACTGGTGCAGTTTTCTTTGGAC
TTGCTTTTTCCTTTGTGACCATTTATTTAGTTGGTAAACGGTGGATAGAA
GGACTTCGAGAATCTAAAGGCAGGCGTGGTTACACCCGTATTTCCTATCT
TCTAAATGGAGTTTGAATGGTATATCTAATAATCTTTGTAATCCTGGTGG
CAGTTTATCCTTTTGAAACTGTTGGTCAGAAACAAGCATGGTCTAATGTT
GTGGCAAGCACATGTAAATTCACTGTGAATCATGACCTGGATATTCGATT
CGAACAAAACCCCTTGCTGTTCATCGATCGATTGACTGAACCTGATGTCA
ACAGTTGTCGAAAGCAATGTTGTGACCACAAAACTTGTAATAGCTATGTG
TGGGATGCATATGATCGAGTGAATGGCAACTGCAAATTATTGAAGTGTTC
AGATGAAGGGACAGATTGTAGGAATGCTTTGACACGAAGAACAAGTGTTG
GAGAAGATAGAAGTCAACACGAAGTGGGCTTTATCACTGGCGTCACTGAT
AACACAACGCCCAATCCTTTGGACGCTGTGTTAGGCCCTCAACCCACTCC
GAAAACGACGACCTTAAAAACGAATTCTCCACACATGAATCCTTCATCTC
AAGTAAAGCTGGATAATCTTGTTACAGATACACCTTTTTCAAGAAAGCCT
CTCGCATCTTCAACAACTACGACCAAATATGTCCCTTCGATAAAAGACAT
GGCGCAAAGGCCATCTACAACGACCACTACATCAAGTACGACATTCATGA
GATCAGCAATGAGCACTATCAAACCAACAACATCAACTAAAACTTCCACA
GTAGTGACACCTgctCCAACAATAATGGAATTTTTACAAACGAACCAATC
AACAACAGATTTACCATCGACCACTCCAAAGAAGACGCATATTCGTACGA
AAACACCGAAGAACGTAACCAAGTCATCTTCAAAGGGGGTCATTGAGGCA
GGAAGTGGGATTTCTCATTCTGATAACATCTCTTTAACTGGTGCAGTTTT
CTTTGGACTTGCTTTTTCCTTTGTGACCATTTATTTAGTTGGTAAACGGT
GGATAGAAGGACTTCGAGAATCTAAAGGCAGGCGTGGTTACACCCGTATT
TCCTATCTTCTAAATGGAGTTTGAATGGTATATCTAATAATCTTTGTAAT
CCTGGTGGCAGTTTATCCTTTTGAAACTGTTGGTCAGAAACAAGCATGGT
CTAATGTTGTGGCAAGCACATGTAAATTCACTGTGAATCATGACCTGGAT
ATTCGATTCGAACAAAACCCCTTGCTGTTCATCGATCGATTGACTGAACC
TGATGTCAACAGTTGTCGAAAGCAATGTTGTGACCACAAAACTTGTAATA
GCTATGTGTGGGATGCATATGATCGAGTGAATGGCAACTGCAAATTATTG
AAGTGTTCAGATGAAGGGACAGATTGTAGGAATGCTTTGACACGAAGAAC
AAGTGTTGGAGAAGATAGAAGTCAACACGAAGTGGGCTTTATCACTGGCG
TCACTGATAACACAACGCCCAATCCTTTGGACGCTGTGTTAGGCCCTCAA
CCCACTCCGAAAACGACGACCTTAAAAACGAATTCTCCACACATGAATCC
TTCATCTCAAGTAAAGCTGGATAATCTTGTTACAGATACACCTTTTTCAA
GAAAGCCTCTCGCATCTTCAACAACTACGACCAAATATGTCCCTTCGATA
AAAGACATGGCGCAAAGGCCATCTACAACGACCACTACATCAAGTACGAC
ATTCATGAGATCAGCAATGAGCACTATCAAACCAACAACATCAACTAAAA
CTTCCACAGTAGTGACACCTgctCCAACAATAATGGAATTTTTACAAACG
AACCAATCAACAACAGATTTACCATCGACCACTCCAAAGAAGACGCATAT
TCGTACGAAAACACCGAAGAACGTAACCAAGTCATCTTCAAAGGGGGTCA
TTGAGGCAGGAAGTGGGATTTCTCATTCTGATAACATCTCTTTAACTGGT
GCAGTTTTCTTTGGACTTGCTTTTTCCTTTGTGACCATTTATTTAGTTGG
TAAACGGTGGATAGAAGGACTTCGAGAATCTAAAGGCAGGCGTGGTTACA
CCCGTATTTCCTATCTTCTAAATGGAGTTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000073_pilon | genome | sc0000073_pilon:1436476..1439965 + |
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