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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000005_pilon:1561636..1564939+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1057.1.p1 ID=MSTRG.1057.1.p1|Name=MSTRG.1057.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3304bp|location=Sequence derived from alignment at sc0000005_pilon:1561636..1564939+ (Clytia hemisphaerica_ch_hm2_pilon)
CTCTTTACCAAATACTGatcattttttgtttcgttttagaaaaacaaaaa
catttacttaaaatgtaaaataaaaacaaccatGGCAGTTATACCTTATG
AAATTTCATGTGGAGTGCTTATTCACGTCTTCTGTCAGAAGATACAAGAC
AATGAAGGTTGGGACAGCGAGTATGTCTCTAAAGGAACAcaacaaacttt
tttaattGGATTATTAAAAATGCTCAAGAAAACCAATTCAACATGGCATG
AATTTGTTGACACCATTAAATCATTTTGTTGGGAAGATTTGTATAATTCC
TTTTTGAAGGAGGTTGAATTACTGGAAACTGAGGATGATATATTAGATGT
CTTCAAATCTCTTGAGGACCTGGTGATCGACCAATCTTCGTCCATAAAGC
TCTCTACACAAAACACACCTATAAAGCGAACAAGCGTGATTGGCCTCTTC
TTACGaaaacttgttttaaaattcaagaaattggcTTTCGAAAAAATCCA
TCTGTTATTCATGGATTATGTTAAATATAAACAACTTTCAAATCCATTTG
AGGAGACGAGTTTGGAAGATAGCGAACGGAGTATGGATCTCAGTTGCGTT
GATGAGAATACGACCAGTGACGTCAGtttgattgaaaatgaaaataagga
aaaccAGCCTTCACCTGTCAAAATAATACCCAAAATAATTGAGAACCAGA
AAACTAATTTAAGCAGCCGTGAAGGAGTGTACCAGTTTATAGAAGAGAAT
GTCATGATGCTTGAAAATAACTCTCATAACGTCATGAAACCTAATCAACT
CCAACAGAAATTAAATGAAATCCAACGCTCTCATTGGCACATACCAGATG
TTTACTATTTATCATTCTTGAATTATTTACGAGTATCTGAATTCAATAAA
GCCTCTAAAATGCTTTCACTCTATTTTGACCAAAAGAACTTTCAGAATCA
AAGCACTAATGCAGACCCAAGTGAACAGGAGAATCACCAAAGTATGTTTA
AGAGGTTCAGATATGCAGCTCTCAATCTTGGTATTATGCATTGCCAACAT
GGAAACTATGCTCAAGCAATGACAGTTTTAAAGGAAGCTGTGTCCATTGC
ACAAGAAACAAATGACGAACTCTGTTTAAAACATGCCATCTTTTGGATAC
ATGTTGTTAATGAAGAGACGAACAGATTGGATAACAAAGATTTAGAATCT
CGTTGTTGTGAATTAATCAAAGAAATCTATACTGAAGATGAGAATGTAAT
TGATAATGTACCGGAGATAGAATCCTTGGATATGTTACGTTGCTCGAAAT
TGATGGCATTACGTGGGTTACGTACGCCAGATTTCATTTTATCCAGCATC
TCTAGAATGATCGTCTCAAACTCTAAAACGTCAGATTCTGCATTGCTAAC
TCGGTCATCGATCTTAGATTTCTATGGGATGAAACTTCTATCTGTATTTA
ATTCGCAGTTCCCTTTACAACGAACCAATAAGGGTACATTGAATACCAAA
CGCCAGATAACTGAGGAGAACTTTACTGTAGCTTTATGTCATCTGGCAAT
GCATTTTGGATCCATCTCCTGTCACAACGAGGCGacagccatcttgaatt
ttctccAAACCCAACACGAATGTTACAGTCGTTATTTGCCGTTAGTTAAA
GAGAGTCGTCTTGGATTAGACTTTTCTAGATATATTAATGAGAGGAATTT
GATAAAAGCGAAACACGTTGCTGATTTTTTCATTGTCTTCAATAAAGATG
AGAGTTCATACATGCATGCTGTTATTGATGCCATACTTGGTAACCACACA
AAAGCGTACCAACGAGCAATGACCTTAAATCAAGAATTATCTTCACACGA
GAAGAGAACAGTACCCCAACTAAAGATCCGAATTCGTTTGTTGTTGATCG
AGTTGAAACTCCTATCTCAAGATTCGAAATCTTGCATTGAAGATATTCTT
GAGTTAGTAACCGTTTTGAAAGAATTGAAAACGACAAGCTTTTTGATTGA
AGTCCAAAGTTGTTTGATAAGGTATAACATGAAGTTTGGATTATTCGATA
AAGCCTTGAAACTCATTGATGATGTATTTATTACTGGATTTACCAACGGG
AATCCGTACCAGTTAGGATGTCTTTATTTCTTACAAGCCAGAGCTACGAC
CTCAAAACTAGACTCTGAATCAGAAAAAGACCCGGAAAATTACGAAACCG
TATTAACCCTTTACGATCGTTCGTTTACGTTTTTCGAGAAAGCTGGAGCT
AAAGCGAGAATACGTGATGTTTATTACGAACGCTCTTTGGTTTATCATCG
AATGGGATTGAGTCAAGAGCGAAACACTGCTGCAACGCACTTTCGTTTGT
TAAACGAAGAATTAAATGGGTTTTGGAATGAGACTTTCTTGTTCTAGGAG
TATTATTTATTCCTTTATTCGGAACAAGACTGCAATTTGATTACTTTGAA
TAAGACTCTCTCTAACTTTCTCTCAGACTTTGAGTTTCTTGAATGAGCAA
TTATTCCAGATTTTCAGTAATTTTGTAAAACAGAGTTCTAAAACGCTAAT
GGCACAAAAAATGACTATGATTTTTGCAGATAGGGtacaaaatcgaaaat
taaaatttttttatgtttgtatGGTTAGAGAGTTACCCGAATGTTATTGC
AAGAAATGAATGAAGTTAATTCAtagatttaaagattttcaaaaaaaatt
agattctgTTTCTTCAATAATTTGTTCCTTCGAATCCGGTATACATAAAA
GTTTTTATACATAGCGCGCGTACTATCACATACTAAGCACTTGATCTGGT
GAaataggcttttccagaaaaagtttgTACATGGGGAAGGTGGAGGatat
atagtgtccggggggggggtagtgaaaaatctacaaaatttgccttgtcc
ggggtaaacttgctctgtttggggtaattttgctctatTTGAGTGTTGAG
GGTCTATTtgatgtccagggggtcaactgatgcttgtccgggggttagAC
CTGCCGTCATCCGGTGGGTCAAAAGTTACAATGTTcttggggtaaatttc
caaaaaatattatattctccacccccccatattcaaatttattttggaaa
agcccaatttacTTTAACTCTAGAccagatgaaaattttgatgttgattt
tagCTCCACAAATTCTGATGTTCTATGGtttgatttacattatttgaaat
ttagttattttttcttcgatatacttttaggaaatattttttgttgttgt
gtaACGTAATAATATCCACAATagaaattacagaaattacaatATAATCA
ACCG Coding sequence (CDS) from alignment at sc0000005_pilon:1561636..1564939+ >MSTRG.1057.1.p1 ID=MSTRG.1057.1.p1|Name=MSTRG.1057.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2316bp|location=Sequence derived from alignment at sc0000005_pilon:1561636..1564939+ (Clytia hemisphaerica_ch_hm2_pilon)
atGGCAGTTATACCTTATGAAATTTCATGTGGAGTGCTTATTCACGTCTT
CTGTCAGAAGATACAAGACAATGAAGGTTGGGACAGCGAGTATGTCTCTA
AAGGAACAcaacaaacttttttaattGGATTATTAAAAATGCTCAAGAAA
ACCAATTCAACATGGCATGAATTTGTTGACACCATTAAATCATTTTGTTG
GGAAGATTTGTATAATTCCTTTTTGAAGGAGGTTGAATTACTGGAAACTG
AGGATGATATATTAGATGTCTTCAAATCTCTTGAGGACCTGGTGATCGAC
CAATCTTCGTCCATAAAGCTCTCTACACAAAACACACCTATAAAGCGAAC
AAGCGTGATTGGCCTCTTCTTACGaaaacttgttttaaaattcaagaaat
tggcTTTCGAAAAAATCCATCTGTTATTCATGGATTATGTTAAATATAAA
CAACTTTCAAATCCATTTGAGGAGACGAGTTTGGAAGATAGCGAACGGAG
TATGGATCTCAGTTGCGTTGATGAGAATACGACCAGTGACGTCAGtttga
ttgaaaatgaaaataaggaaaaccAGCCTTCACCTGTCAAAATAATACCC
AAAATAATTGAGAACCAGAAAACTAATTTAAGCAGCCGTGAAGGAGTGTA
CCAGTTTATAGAAGAGAATGTCATGATGCTTGAAAATAACTCTCATAACG
TCATGAAACCTAATCAACTCCAACAGAAATTAAATGAAATCCAACGCTCT
CATTGGCACATACCAGATGTTTACTATTTATCATTCTTGAATTATTTACG
AGTATCTGAATTCAATAAAGCCTCTAAAATGCTTTCACTCTATTTTGACC
AAAAGAACTTTCAGAATCAAAGCACTAATGCAGACCCAAGTGAACAGGAG
AATCACCAAAGTATGTTTAAGAGGTTCAGATATGCAGCTCTCAATCTTGG
TATTATGCATTGCCAACATGGAAACTATGCTCAAGCAATGACAGTTTTAA
AGGAAGCTGTGTCCATTGCACAAGAAACAAATGACGAACTCTGTTTAAAA
CATGCCATCTTTTGGATACATGTTGTTAATGAAGAGACGAACAGATTGGA
TAACAAAGATTTAGAATCTCGTTGTTGTGAATTAATCAAAGAAATCTATA
CTGAAGATGAGAATGTAATTGATAATGTACCGGAGATAGAATCCTTGGAT
ATGTTACGTTGCTCGAAATTGATGGCATTACGTGGGTTACGTACGCCAGA
TTTCATTTTATCCAGCATCTCTAGAATGATCGTCTCAAACTCTAAAACGT
CAGATTCTGCATTGCTAACTCGGTCATCGATCTTAGATTTCTATGGGATG
AAACTTCTATCTGTATTTAATTCGCAGTTCCCTTTACAACGAACCAATAA
GGGTACATTGAATACCAAACGCCAGATAACTGAGGAGAACTTTACTGTAG
CTTTATGTCATCTGGCAATGCATTTTGGATCCATCTCCTGTCACAACGAG
GCGacagccatcttgaattttctccAAACCCAACACGAATGTTACAGTCG
TTATTTGCCGTTAGTTAAAGAGAGTCGTCTTGGATTAGACTTTTCTAGAT
ATATTAATGAGAGGAATTTGATAAAAGCGAAACACGTTGCTGATTTTTTC
ATTGTCTTCAATAAAGATGAGAGTTCATACATGCATGCTGTTATTGATGC
CATACTTGGTAACCACACAAAAGCGTACCAACGAGCAATGACCTTAAATC
AAGAATTATCTTCACACGAGAAGAGAACAGTACCCCAACTAAAGATCCGA
ATTCGTTTGTTGTTGATCGAGTTGAAACTCCTATCTCAAGATTCGAAATC
TTGCATTGAAGATATTCTTGAGTTAGTAACCGTTTTGAAAGAATTGAAAA
CGACAAGCTTTTTGATTGAAGTCCAAAGTTGTTTGATAAGGTATAACATG
AAGTTTGGATTATTCGATAAAGCCTTGAAACTCATTGATGATGTATTTAT
TACTGGATTTACCAACGGGAATCCGTACCAGTTAGGATGTCTTTATTTCT
TACAAGCCAGAGCTACGACCTCAAAACTAGACTCTGAATCAGAAAAAGAC
CCGGAAAATTACGAAACCGTATTAACCCTTTACGATCGTTCGTTTACGTT
TTTCGAGAAAGCTGGAGCTAAAGCGAGAATACGTGATGTTTATTACGAAC
GCTCTTTGGTTTATCATCGAATGGGATTGAGTCAAGAGCGAAACACTGCT
GCAACGCACTTTCGTTTGTTAAACGAAGAATTAAATGGGTTTTGGAATGA
GACTTTCTTGTTCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000005_pilon | genome | sc0000005_pilon:1561636..1564939 + |
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