MSTRG.10539.1.p1 (mRNA) -

Overview
NameMSTRG.10539.1.p1
Unique NameMSTRG.10539.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000073_pilon:1039943..1041282-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10539.1.p1 ID=MSTRG.10539.1.p1|Name=MSTRG.10539.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1340bp|location=Sequence derived from alignment at sc0000073_pilon:1039943..1041282- (Clytia hemisphaerica_ch_hm2_pilon)
GAACGATAAAAAACTTTTTCTAACGATGAATGTTTAAAAACCGTTTGATT TAGGTTATGTTTGCGGTTTTTTATACTCTGAAACATCAATAAGACAATAG GATAAAAAGCAAAGACATCGTTTTTGAGTCATAATTCTACCAATTAGAGA TTGTTTTCTTTTGATTATGACGTCACAAGGTCAGTATATATATTGGCTAG GAGGAGAGCATCTCATTTATATCTAATCACAACTCAGTAGAGAGAAGACG TCTCATAAGAAAGACAAACAGTCAATCAAAACTAACTATTTCAATTTTGT ACAGAAATACACTCAAAGAAAATGATTGGAAACTCATTGATGAAGACCGT CGCCATCTTGGTTTTATTGTCATGCTTAATGGAGCGAACTGGAGCAAAAC CCTCTGCTATGAAGTTTCTGAAGTTTAAGTGTAACTACAAATGTATGACA GATTTCGATATGTGTGTATCATTGATTACCACTATGCCGATGTATGTCAT CTGCTATCGCGCTCAAGGAATATGCAAACGAAGCTGCAAACGAGATTTCG GGAAGAAGACTAAACGCTCCGTCGGAGACTATCACGCACCTGAAACAACG GTATCACCAACATTAAGACACGCCAAGAAGTTGGCGCATCAAAAGGTTCA TAAATGAAGAGATTATGTTACATAAGATGGTTAAGGAGAGTTGATTATGG TGAAAAGTTGAAAAAACACTTTGTTTAACAAGTAATTCATTCATAGTGAC AATAATTCATACAAAAATGACATTTTGTCGTCTGCCTTATCATCATAAGA GCGAAATAGTGAGTTCAACAAGGGTCATACACGACAATAAGACATTGAAA AAGGTGCTTAGCTTCCTCTATTTATTTTCGGAAGGAGACAGTAACTAGGA TGTTTAATTCCTTTAGCAAGATAAACTTAAAAATGGAATGACATTGTCAA ATTGATTTATGTGTATTTTCACAAAATAGTAACGTCTATTGAAAAAGACA TTCACAGCATTGATGAATGGACGAAGAAAGTTTCCAAAGGGGATATATTT GCAGATTAGATTTAACACTTTATTATTACTGTAGATAATTTGTACATATT TGTTGATAGAAGCTATTACAAAATTTATTTATTTATAATTTTTTTAAATA TACTATTTTCAGTTTAAATTTCTCGTTTCATATTTTGTAAAAATTGGCAG TCTAAAATTTTTTAAATAAAGAGTTTTTAATTTATTGAAGAAAATTATCA AAAATAAATCGCAATGTTTTAATTAAATTTCTGAGCAGCCCTTAGCAGCA CAGCGTATCTCTTGACAAACAAAAACAAGATTATCGATAA

Coding sequence (CDS) from alignment at sc0000073_pilon:1039943..1041282-

>MSTRG.10539.1.p1 ID=MSTRG.10539.1.p1|Name=MSTRG.10539.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=336bp|location=Sequence derived from alignment at sc0000073_pilon:1039943..1041282- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTGGAAACTCATTGATGAAGACCGTCGCCATCTTGGTTTTATTGTC
ATGCTTAATGGAGCGAACTGGAGCAAAACCCTCTGCTATGAAGTTTCTGA
AGTTTAAGTGTAACTACAAATGTATGACAGATTTCGATATGTGTGTATCA
TTGATTACCACTATGCCGATGTATGTCATCTGCTATCGCGCTCAAGGAAT
ATGCAAACGAAGCTGCAAACGAGATTTCGGGAAGAAGACTAAACGCTCCG
TCGGAGACTATCACGCACCTGAAACAACGGTATCACCAACATTAAGACAC
GCCAAGAAGTTGGCGCATCAAAAGGTTCATAAATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10539MSTRG.10539Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10539.1.p1.exon1MSTRG.10539.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10539.1.p1MSTRG.10539.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000073_pilongenomesc0000073_pilon:1039943..1041282 -