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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000073_pilon:967818..970353- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10533.1.p1 ID=MSTRG.10533.1.p1|Name=MSTRG.10533.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2536bp|location=Sequence derived from alignment at sc0000073_pilon:967818..970353- (Clytia hemisphaerica_ch_hm2_pilon)
GAAAAAACTAAAAACATGATAAGTAGAAAAGTTATAAGGGAAAAAGGCTC
CTTTTCGAGTTAAACTGACGTGACAAAACAGACGAAGGCAAAGTACAAAA
AGATGTCATATGATTCAGGAACTTTGGGCTAAGATTTGTAAGCAGAGAAT
TAATTAATATCGGATAAGACTTTTTTTTCTTATTTATGTTTATTCAAGTA
AAGATCGATGTTCATTATTCACATTTTTTATTAGAAATAACTCATTGATT
AGTTAATTGGCTAAAAGTACTTTGATTTTTTATTCGCTTTTGTTGTTAAA
GCCCTAATTATTGTTTACCTAAAGCTGTGTGTAAATCTATGATCGCCCCT
CAACATTTCCTATTGACCATTTGTTGTTTTAGTTCTTGCAAAAGTAATAG
CTGTGACTACTCTATCATTTGCGAGAGGAGGATAGCTGAAGAGGCGCGCT
GCATATTCGAATATTGCTGCTTCGCTAAAAAGAAAAAATGAATTGCTCAG
TGCTTGTTGGTGGTTTTGGTGAAACGATTGAATTATTCAAACTTTCAATC
AATTTGTCAGCCCCAGAAGAAACACGTTTGAATTTTGTATCATCTAGCAA
AGTTGGAGAAAATCCTTCATTTCTCGCTGTCAATAGTAATGGGGTTTATT
GTGTCCACGAGGTAAGTATTAATCTTTTCTGTTTGTTGTGTGTCGTTTGT
AAACGAGTATCTTGGAGTATTCTAAAGTTAAAATGTTAAACAAGAGTGAG
AATAGTTCTTTTACTACGTTAGACTTGTGGTTTTGTCGCAGTTAACAAAG
GGGAAAGGTTATAGTAATATTGTAAATAAATAAGAAATAAATCAGTCTTA
TAGTCTGGCAGAATTATGTAGTAAAAATTGGGGCCCGTAATTGAGCTGGA
AAAAAATTCCGCGTAAGGTTTCTTGGTATCGTCAGAAGCGGAATTATTTT
CTAAGTTCGCCTCTATTCCGGGGGGGGGGGGCTACTCGATTTCGAAACGA
CGGTATGTGCCGCGCAAAATCTGCCTTTCAAAATCGTACCCTTACAGTGC
AGTTCAATATGGCTGAAAAGGTACCCTTTCAGTGCATTTTCTTATGATTT
ACCCAACCCTTATAGTGCACTATATTTTTCAGCTGTAAATCTGCGTGTAA
AAAAGGCTTGGGAAATTTTCTGTCTCAAAGAAAAACTGAGAAAATAACTT
GTCAGATGTAATTATCAGACAATAGAAACTTTTTCAAACAAAGGAGAAGT
AAAAACCTTTCTTTGTATCAATTATTTTGAATTTGTTTTAAAATTCGACC
CTTGAATTGCAATCTCACAGAAACACACCCTTACAGTGCATTTTGGGATG
CTGAAAAACCCCACCCTTAAGCGCGGCACATGACGTAGGCCAGATCATAT
GAGTGCCCCCCCCCCCAGGCCTCTATTATGTCACATTTCTGCTAGATTGT
AACTGTCTTTACTGTGTTGTATTCTTGTTTTTTTTCTTCGCAGGTTTCAC
TATTCAAAGGAGAAAAGAATGGAGGGTTCTCGTTTATGAAAATTGACGAA
ACCAACGTCATTCGGAAAATTCAAGAGCAGTTTTCAAGTGGAGAAGACCC
TACTCATGTTATCTTGAACATGAAAAGGAGTTGTGCTTATATCAGTAATT
ATTCGTCGGGACATTTCGCTGTTACAAAAATCAAGGAGAACGGTTTGTTA
GGAAGTTGTGCTTACATTGAAAGCTATGATTCTGGAAGTGGAGTTGTTGC
AGAGCGTCAAAAAGAATCCCATCCTCATGGCGCATGTTTCAAAGGAAAGT
TCGTCTACTGTGTAGATCTAGGGGCTGATTGTGTTTATCATTACGTGCAT
GGAAATGGCTACGAGTTCAATTCACCTAAAGCTGAACGAACACCTACTGG
CCCAGGTTCTGGACCAAGACACATGGTTTTCCATCCAAGGCATAAGATTG
CCTATTTGATTACTGAGCTGACAAACGAAATAATCATTTTCAAGCAAAAT
GAAAGTAACGGCTCTTTAGCAGAGGTTTCTAGACAAAACTTTCTGACAAG
TGATTTGATTGAGGATGGTGTAACGAATTATGGGTCTGAGATAATGGTGC
ACCCTAATGGTAAGTATTTATACCTGAGTAATCGTGGAAATGGTGCTCTC
ATCTCGTATGAAATTTCAACTGAAGGCGATCAACTGAAAAGAATAGAAAC
GACAAGGCTTGTAGGAACTTGGCCAAGACATTTTAACATACATCCGTCGG
GAAAAGCATTGTTGTGCGCAGATCAATTCAAAAACTTAATCGAAGTTTTT
TACATCGATGATTACACTGGGAAGTTAAGAAAAGTTCAAGAAGTTGATTG
CAAAAACAGTCCATCATGTGTTATATTTAAATTCTGAGTACTGAACTCTT
TTTACATTTTTTATTTTCGATACGCAAGTTTTGAACAACCGCGATGTATT
CTTCACATTTTATAGGTTTTCTTTTACAATAAAACCAAGACATTTTGTAT
TCATCATTTAAAATATAGAGAATATCATACAATAAA Coding sequence (CDS) from alignment at sc0000073_pilon:967818..970353- >MSTRG.10533.1.p1 ID=MSTRG.10533.1.p1|Name=MSTRG.10533.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2136bp|location=Sequence derived from alignment at sc0000073_pilon:967818..970353- (Clytia hemisphaerica_ch_hm2_pilon)
GTTTCACTATTCAAAGGAGAAAAGAATGGAGGGTTCTCGTTTATGAAAAT
TGACGAAACCAACGTCATTCGGAAAATTCAAGAGCAGTTTTCAAGTGGAG
AAGACCCTACTCATGTTATCTTGAACATGAAAAGGAGTTGTGCTTATATC
AGTAATTATTCGTCGGGACATTTCGCTGTTACAAAAATCAAGGAGAACGG
TTTGTTAGGAAGTTGTGCTTACATTGAAAGCTATGATTCTGGAAGTGGAG
TTGTTGCAGAGCGTCAAAAAGAATCCCATCCTCATGGCGCATGTTTCAAA
GGAAAGTTCGTCTACTGTGTAGATCTAGGGGCTGATTGTGTTTATCATTA
CGTGCATGGAAATGGCTACGAGTTCAATTCACCTAAAGCTGAACGAACAC
CTACTGGCCCAGGTTCTGGACCAAGACACATGGTTTTCCATCCAAGGCAT
AAGATTGCCTATTTGATTACTGAGCTGACAAACGAAATAATCATTTTCAA
GCAAAATGAAAGTAACGGCTCTTTAGCAGAGGTTTCTAGACAAAACTTTC
TGACAAGTGATTTGATTGAGGATGGTGTAACGAATTATGGGTCTGAGATA
ATGGTGCACCCTAATGGTAAGTATTTATACCTGAGTAATCGTGGAAATGG
TGCTCTCATCTCGTATGAAATTTCAACTGAAGGCGATCAACTGAAAAGAA
TAGAAACGACAAGGCTTGTAGGAACTTGGCCAAGACATTTTAACATACAT
CCGTCGGGAAAAGCATTGTTGTGCGCAGATCAATTCAAAAACTTAATCGA
AGTTTTTTACATCGATGATTACACTGGGAAGTTAAGAAAAGTTCAAGAAG
TTGATTGCAAAAACAGTCCATCATGTGTTATATTTAAATTCTGAATGAAT
TGCTCAGTGCTTGTTGGTGGTTTTGGTGAAACGATTGAATTATTCAAACT
TTCAATCAATTTGTCAGCCCCAGAAGAAACACGTTTGAATTTTGTATCAT
CTAGCAAAGTTGGAGAAAATCCTTCATTTCTCGCTGTCAATAGTAATGGG
GTTTATTGTGTCCACGAGGTTTCACTATTCAAAGGAGAAAAGAATGGAGG
GTTCTCGTTTATGAAAATTGACGAAACCAACGTCATTCGGAAAATTCAAG
AGCAGTTTTCAAGTGGAGAAGACCCTACTCATGTTATCTTGAACATGAAA
AGGAGTTGTGCTTATATCAGTAATTATTCGTCGGGACATTTCGCTGTTAC
AAAAATCAAGGAGAACGGTTTGTTAGGAAGTTGTGCTTACATTGAAAGCT
ATGATTCTGGAAGTGGAGTTGTTGCAGAGCGTCAAAAAGAATCCCATCCT
CATGGCGCATGTTTCAAAGGAAAGTTCGTCTACTGTGTAGATCTAGGGGC
TGATTGTGTTTATCATTACGTGCATGGAAATGGCTACGAGTTCAATTCAC
CTAAAGCTGAACGAACACCTACTGGCCCAGGTTCTGGACCAAGACACATG
GTTTTCCATCCAAGGCATAAGATTGCCTATTTGATTACTGAGCTGACAAA
CGAAATAATCATTTTCAAGCAAAATGAAAGTAACGGCTCTTTAGCAGAGG
TTTCTAGACAAAACTTTCTGACAAGTGATTTGATTGAGGATGGTGTAACG
AATTATGGGTCTGAGATAATGGTGCACCCTAATGGTAAGTATTTATACCT
GAGTAATCGTGGAAATGGTGCTCTCATCTCGTATGAAATTTCAACTGAAG
GCGATCAACTGAAAAGAATAGAAACGACAAGGCTTGTAGGAACTTGGCCA
AGACATTTTAACATACATCCGTCGGGAAAAGCATTGTTGTGCGCAGATCA
ATTCAAAAACTTAATCGAAGTTTTTTACATCGATGATTACACTGGGAAGT
TAAGAAAAGTTCAAGAAGTTGATTGCAAAAACAGTCCATCATGTGTTATA
TTTAAATTCTGAATGAATTGCTCAGTGCTTGTTGGTGGTTTTGGTGAAAC
GATTGAATTATTCAAACTTTCAATCAATTTGTCAGCCCCAGAAGAAACAC
GTTTGAATTTTGTATCATCTAGCAAAGTTGGAGAAAATCCTTCATTTCTC
GCTGTCAATAGTAATGGGGTTTATTGTGTCCACGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000073_pilon | genome | sc0000073_pilon:967818..970353 - |
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