|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000073_pilon:863197..866156- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10522.3.p1 ID=MSTRG.10522.3.p1|Name=MSTRG.10522.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2960bp|location=Sequence derived from alignment at sc0000073_pilon:863197..866156- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTTATTAAAAAACTGTCATCCAAACGATAGTCTGATTTCAAAATTGAC
AAGTTTTCTATTAATCACCCAACTGTGTTTCGAGCTTGAGCTAACATACT
ATTTGTAGCAATGAGCTGATATTTTTTCATGTAATTTTCGTATTCTACAG
AGATGACCAAGTCCAGTTTTGGAGGAGAAAACAAGAGCTTCTTAGTCAAG
TAAGTAATGATTTTTTCTATTATACAACTTATAAAGTGCAAAATGGAGGA
GAAAATACTTCATAACTATTCAGAAATAACTCAAATGGTTGCTGTCTTAA
ATCTCTTAAAGACTGCTTATCTTTGAAAAGTTATCCAAGGTGTCTTTAAC
AGGGTTACTAAAGGCGTATTGTCATCGTTGAGGCCCCCAATGTTTTCAAT
TCAAGCGATACTCATAAAACTCTTAACATTGCTAGCTCAATCATACTGCA
TGAGTCAACTTTGAAATAGACAAGCCTTTTGATCCTGTAGACTGTACAGT
GACATTGAGCGAAAATCATCATCGAGAGAAAGATAGAGAGAGAGAAAGAG
TAGAGGTTGGAGGGTGTTCATCAAAAACATTCTCTGAGATTTGAATTTAA
CTGTAAGTAAATGTTATCATTCTACAACTTAGTTTCCTGCTGTAATTAGT
TGTCAAGGTTGTCAAATTAGTGTGGTCAGATAGTCAAAACAGACTTACGG
AAAATGAAATTACTTGCAATATAGAGTTGTTAGATGAGATATAAGATTTG
TTTGTCAACACTCAAAGCATTTAAAAAAGACTGATATCCAACAAAGACTG
ATATTTCTTGCTTTGTTTTCTCGATTTTTTCTAATTCTTCACTATGCATC
GACACGATGACTATCTGTAAGTAATTCTGTAATATAAACGACATTTTGTT
AATGTTACCCTAAATTCACGCCAATGACTCAACTGTGAGAGTAACATTTA
GCAAAATTCTTTATAAATTTTTTTTTTTTATTTCAGGGACAAGATGGCAT
TGAACAAATCATTCGACGAAACTGATTCAGGAGCACCCTCAAAACATGCT
GACCTTAAACATCTTCAGGAAAACTATGACAAAATCACAGACACAAAACT
CCCTGAAAATCTACACCGTGGTGACATCACAACTGTCAACCGTTTCCTTG
GTTACCATGATGCCATGATGGCTACCTGTGGGACTTTTCTAATTTTACCA
TTACGTAATCTTAAAAATATGGTGAAAACTGACGAATATGAAGAGTTGAA
AGCGAAACACAAACTACCCCATGATCCGATCGTTGTCGAGGATTTAGCTG
GTTATCTGGACGCAATGAAAACTGAATTTATCATGTTCTTCCTTGGTTTT
CTCATTATATGCACGATTTGGGAGACCAACATCATTCGAACGAACGTCAT
CAAAAGATTCGATGATTTCATGGTTATGCTTGGACTTTTCCAGATGGCAG
CCATTGTGGTTCTTCCTTTCTCAATTTCATTGATGGGTCATTATCCAAAC
GATGACGTAACGATCATTTCAACAATGGTGGTTTTGATGATTATATATGT
TCTAGAATTGGTCATGATTTTGTACGGATTCTATTGTCCTCGTTTGTTGA
ACATGGCAATGAGAGATTGGACTGATAAAGAGGTTAGAGGTTTCATGCTA
AGGATGTGCATTAAGCCAATTGCTGAAATAGTTTTGGTGGGCGTTGCAGG
TGCTTTCAGCCTTCTACAAAATCACGTGGCCTGGGGACTGTTAGCCTTGT
TGATTATAGTACCGCTGATCCGTAAGTTCGTATATTTCTATCGACGTCGA
CGCGCCGAAAAGACCAAGGTTCAACGATGTCGTTTCTACTATTTCTTCAC
GAAAGGACAGATCAGTAAAGAAAGAGTAGAAGCATTTTCGGACGCAGCCA
TTGCAATCATTGCCTGTGTATTGATTTTGGACATCACAGTCGAAGAGTTC
CCAACACGTCACGACGTTCACGAACATGGCTTACTTTCAGTTCTCGCACA
CATGGAATTCGAGTTTGGCGCTTTTTTTGGCACTTATATGGCAGTGTCCT
TTTTGTGGTACGTCAACCATACTGTATTACATCTTTTCCATACCATCGAC
ATTGGCGCATTGTATTTGCAGAAAATCTTTCTTGCATTTCTTTGTTTTGC
ACCCATATTGAACAATATGATGGTGGAGTTTGAATTCGGTCATGGTACAG
AATCAGAGAAGCGAACAGCCTTGCAATGGAGCAGTGGAATGTTATTTGCT
GCAAGTTTAACGCAACTCCTGATGCTTATCTGGGGATCAGTGCGAAAAGA
CAAACTTCTACACCGGTGGGCAACACATGAAGACAAGAACCATAAGAATA
AGATGAATCGAAAACAATTCATGTACATTCAATTGAAAATCATTGTTGTT
CCTTTCTGGACGCTTGTTGGTATCTTCAGTTCATATGCAACTGGTAACGC
AGCTATGATCATCACCTGTGCGTGTATAGCTGGTACCCTACTCTCCTTTA
TCATACTCAAGTTTATCTTCATAAATCACATCAACAAACCAGCTATATTC
ATCACCCAAAACAGTAGTTCCGGTAGACATTTATCCCTCGGTGACATTGA
ACTACGGAACAGTATGGCGGAGGAGATAGCGGATGGGAAAGTGTACGAGG
ATGAAAATGAGATGGAGAGAGAAGTTCTGGAAGAGGCGGAAAATAAAGAA
ATTAAAGACGAACAAAAGGAAGAACGACAGGAAAATGACATGGCTGAAAC
TGTTCTAAATGAAGAATCAAACGAGGACACTATTATGTAATATTGAAAAA
GAATTTTAGTTTTATTTACTAAGAATTTTTATTGATAGGATCAAAACATA
ATCATTTAATCCGTAACTTAGATTTATTTCTGGCTGGCCGAAGTAGTTCC
GCTCTTGTCTGTAAGCTTTCTCCTTTGTGAATATCATAAGTTAAAACAAG
AGCCGCAAAG Coding sequence (CDS) from alignment at sc0000073_pilon:863197..866156- >MSTRG.10522.3.p1 ID=MSTRG.10522.3.p1|Name=MSTRG.10522.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3654bp|location=Sequence derived from alignment at sc0000073_pilon:863197..866156- (Clytia hemisphaerica_ch_hm2_pilon)
GGACAAGATGGCATTGAACAAATCATTCGACGAAACTGATTCAGGAGCAC
CCTCAAAACATGCTGACCTTAAACATCTTCAGGAAAACTATGACAAAATC
ACAGACACAAAACTCCCTGAAAATCTACACCGTGGTGACATCACAACTGT
CAACCGTTTCCTTGGTTACCATGATGCCATGATGGCTACCTGTGGGACTT
TTCTAATTTTACCATTACGTAATCTTAAAAATATGGTGAAAACTGACGAA
TATGAAGAGTTGAAAGCGAAACACAAACTACCCCATGATCCGATCGTTGT
CGAGGATTTAGCTGGTTATCTGGACGCAATGAAAACTGAATTTATCATGT
TCTTCCTTGGTTTTCTCATTATATGCACGATTTGGGAGACCAACATCATT
CGAACGAACGTCATCAAAAGATTCGATGATTTCATGGTTATGCTTGGACT
TTTCCAGATGGCAGCCATTGTGGTTCTTCCTTTCTCAATTTCATTGATGG
GTCATTATCCAAACGATGACGTAACGATCATTTCAACAATGGTGGTTTTG
ATGATTATATATGTTCTAGAATTGGTCATGATTTTGTACGGATTCTATTG
TCCTCGTTTGTTGAACATGGCAATGAGAGATTGGACTGATAAAGAGGTTA
GAGGTTTCATGCTAAGGATGTGCATTAAGCCAATTGCTGAAATAGTTTTG
GTGGGCGTTGCAGGTGCTTTCAGCCTTCTACAAAATCACGTGGCCTGGGG
ACTGTTAGCCTTGTTGATTATAGTACCGCTGATCCGTAAGTTCGTATATT
TCTATCGACGTCGACGCGCCGAAAAGACCAAGGTTCAACGATGTCGTTTC
TACTATTTCTTCACGAAAGGACAGATCAGTAAAGAAAGAGTAGAAGCATT
TTCGGACGCAGCCATTGCAATCATTGCCTGTGTATTGATTTTGGACATCA
CAGTCGAAGAGTTCCCAACACGTCACGACGTTCACGAACATGGCTTACTT
TCAGTTCTCGCACACATGGAATTCGAGTTTGGCGCTTTTTTTGGCACTTA
TATGGCAGTGTCCTTTTTGTGGTACGTCAACCATACTGTATTACATCTTT
TCCATACCATCGACATTGGCGCATTGTATTTGCAGAAAATCTTTCTTGCA
TTTCTTTGTTTTGCACCCATATTGAACAATATGATGGTGGAGTTTGAATT
CGGTCATGGTACAGAATCAGAGAAGCGAACAGCCTTGCAATGGAGCAGTG
GAATGTTATTTGCTGCAAGTTTAACGCAACTCCTGATGCTTATCTGGGGA
TCAGTGCGAAAAGACAAACTTCTACACCGGTGGGCAACACATGAAGACAA
GAACCATAAGAATAAGATGAATCGAAAACAATTCATGTACATTCAATTGA
AAATCATTGTTGTTCCTTTCTGGACGCTTGTTGGTATCTTCAGTTCATAT
GCAACTGGTAACGCAGCTATGATCATCACCTGTGCGTGTATAGCTGGTAC
CCTACTCTCCTTTATCATACTCAAGTTTATCTTCATAAATCACATCAACA
AACCAGCTATATTCATCACCCAAAACAGTAGTTCCGGTAGACATTTATCC
CTCGGTGACATTGAACTACGGAACAGTATGGCGGAGGAGATAGCGGATGG
GAAAGTGTACGAGGATGAAAATGAGATGGAGAGAGAAGTTCTGGAAGAGG
CGGAAAATAAAGAAATTAAAGACGAACAAAAGGAAGAACGACAGGAAAAT
GACATGGCTGAAACTGTTCTAAATGAAGAATCAAACGAGGACACTATTAT
GTAAATGCATCGACACGATGACTATCTGGACAAGATGGCATTGAACAAAT
CATTCGACGAAACTGATTCAGGAGCACCCTCAAAACATGCTGACCTTAAA
CATCTTCAGGAAAACTATGACAAAATCACAGACACAAAACTCCCTGAAAA
TCTACACCGTGGTGACATCACAACTGTCAACCGTTTCCTTGGTTACCATG
ATGCCATGATGGCTACCTGTGGGACTTTTCTAATTTTACCATTACGTAAT
CTTAAAAATATGGTGAAAACTGACGAATATGAAGAGTTGAAAGCGAAACA
CAAACTACCCCATGATCCGATCGTTGTCGAGGATTTAGCTGGTTATCTGG
ACGCAATGAAAACTGAATTTATCATGTTCTTCCTTGGTTTTCTCATTATA
TGCACGATTTGGGAGACCAACATCATTCGAACGAACGTCATCAAAAGATT
CGATGATTTCATGGTTATGCTTGGACTTTTCCAGATGGCAGCCATTGTGG
TTCTTCCTTTCTCAATTTCATTGATGGGTCATTATCCAAACGATGACGTA
ACGATCATTTCAACAATGGTGGTTTTGATGATTATATATGTTCTAGAATT
GGTCATGATTTTGTACGGATTCTATTGTCCTCGTTTGTTGAACATGGCAA
TGAGAGATTGGACTGATAAAGAGGTTAGAGGTTTCATGCTAAGGATGTGC
ATTAAGCCAATTGCTGAAATAGTTTTGGTGGGCGTTGCAGGTGCTTTCAG
CCTTCTACAAAATCACGTGGCCTGGGGACTGTTAGCCTTGTTGATTATAG
TACCGCTGATCCGTAAGTTCGTATATTTCTATCGACGTCGACGCGCCGAA
AAGACCAAGGTTCAACGATGTCGTTTCTACTATTTCTTCACGAAAGGACA
GATCAGTAAAGAAAGAGTAGAAGCATTTTCGGACGCAGCCATTGCAATCA
TTGCCTGTGTATTGATTTTGGACATCACAGTCGAAGAGTTCCCAACACGT
CACGACGTTCACGAACATGGCTTACTTTCAGTTCTCGCACACATGGAATT
CGAGTTTGGCGCTTTTTTTGGCACTTATATGGCAGTGTCCTTTTTGTGGT
ACGTCAACCATACTGTATTACATCTTTTCCATACCATCGACATTGGCGCA
TTGTATTTGCAGAAAATCTTTCTTGCATTTCTTTGTTTTGCACCCATATT
GAACAATATGATGGTGGAGTTTGAATTCGGTCATGGTACAGAATCAGAGA
AGCGAACAGCCTTGCAATGGAGCAGTGGAATGTTATTTGCTGCAAGTTTA
ACGCAACTCCTGATGCTTATCTGGGGATCAGTGCGAAAAGACAAACTTCT
ACACCGGTGGGCAACACATGAAGACAAGAACCATAAGAATAAGATGAATC
GAAAACAATTCATGTACATTCAATTGAAAATCATTGTTGTTCCTTTCTGG
ACGCTTGTTGGTATCTTCAGTTCATATGCAACTGGTAACGCAGCTATGAT
CATCACCTGTGCGTGTATAGCTGGTACCCTACTCTCCTTTATCATACTCA
AGTTTATCTTCATAAATCACATCAACAAACCAGCTATATTCATCACCCAA
AACAGTAGTTCCGGTAGACATTTATCCCTCGGTGACATTGAACTACGGAA
CAGTATGGCGGAGGAGATAGCGGATGGGAAAGTGTACGAGGATGAAAATG
AGATGGAGAGAGAAGTTCTGGAAGAGGCGGAAAATAAAGAAATTAAAGAC
GAACAAAAGGAAGAACGACAGGAAAATGACATGGCTGAAACTGTTCTAAA
TGAAGAATCAAACGAGGACACTATTATGTAAATGCATCGACACGATGACT
ATCT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000073_pilon | genome | sc0000073_pilon:863197..866156 - |
|
