MSTRG.10493.1.p1 (mRNA) -

Overview
NameMSTRG.10493.1.p1
Unique NameMSTRG.10493.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000073_pilon:498872..501041-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10493.1.p1 ID=MSTRG.10493.1.p1|Name=MSTRG.10493.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2170bp|location=Sequence derived from alignment at sc0000073_pilon:498872..501041- (Clytia hemisphaerica_ch_hm2_pilon)
AGAAATATTATTTTTTTTAGAAAATCTTAAGAGAAATTTTAAAAATTTGT
CGATCAAAATCATAAAATATATCTTATCATAAGAAGAAATTACGTAAGAT
ATTCTCAAAGAAAAATATTATATGCAGGTGTTATTTTGTTACCAACAATG
GGTTGGTTGAAATCAGTATTTTGTGGAGTGAAATGGTTCTTAGGGATCGA
TGAAGATCAATCGAATGACTCAAAACTTGCTCCAAAAGCATCTCCATTCG
TCGACAGCAAACCGAGGTAAAAATTACCTTCCACTCTCAACTCTAATGCT
TTGACGTCAGATACCTCTGAAATGTTTTATTGATTGTGAAAGAAAGATAC
CTGTTGATCTCGCACTCTCGACAATGCTCGCTTTTGTTCTTTAAATTGTA
TGAGTCGAATTGAAACTTTTGGGGGAAAATAGGCTAAAAACATTTTTCAA
CGATGGCTATTTTATAATTAACCTACTGAAACCTCTACCTTTTAACTAAG
GCTGAAATAAAATTTCAATTTCAATTTTCAGCCGTATGTACTATGATGAA
GACGGGGACTTAGCAGAAGAATTTTATGAAGAAGTCACTCCGCAACAAGG
AACTCCATGGATGAGAAGAGTCACCAAAAACCTTACCAAACAGGTCTGTC
GAGTTGACTTTACATCATCCCACTATTCTTAAGATTGCTAAATTTCTTTT
AAGAATAGACCAAAAGCTGAGAGACCTAATTTAGAAAGTCTAAATCCCTA
AAATTTGTGTAAAATGCTGTAGGTGCATTTTTGAAAACGTTGGAATAATT
TTAAGAAATTAGAATTGTATGTAAATTTGACCTCTAGGCATTTCAGGGTG
TGCGAAACATTAAAAATAATTTACCAAGGGAATGTTAAAAACGATTTCAA
GGATTTTTCTATTCAAAAAATTCTAAAAAATTCACGATATCAAGAGATAT
TAAGAGAGAGTTTATGTATTTCGTCCCACGTAAACATTTTCAAGGATTTT
AGGGAGAAAGGAGAAAATCTACATTTTTTTACTTAGACTTCGGCAAAAAG
TTTTGATAACGTTTAATTTTTAAGATTTTCGGGTTTTTCATTAATTTTTT
TTCCTCTCAATTTTCAAGCTATAGAAATGGAAATGATGTTGCCATCAACT
TTTAATCAGTTGCCTTGAAACCCACGAATTTCTTTGAACAATCCTTATTT
TTAAATGATAATAATGATAATGATGAAACGATTATCTTAACGACATTTCA
ACTCGATTTCAATAATGGCACAATTTGTTATGAAAAAGTCATTTTTGGTT
TGCAGCAATTTTCATACAGACAATCTGAAGAACCAAATAAACCATACAAC
TATTTTAACCACCTTATATAATGAGATTTTTTATCGCCTCGTGATCAAAT
CTGAAGAAATGAATGACGTCTTGAGATTTCATGAGATTTAATGACAGATT
ATAGACAAGGAAGAAGATTAGTGAAATGGTTTGATACTCAATTTCTTGTC
GCTTCTTCCTTTTGTCTTTCGGTGTTAAAATGACTCACGAATTTAACTTC
TATCGATATTATATTTTATAATGGCTCTTTGACAAAATAGCACCTATGTC
CAGTGATTTGGTAAGTCAGCTCAAGGAGATGAAATAGAGGATTTGTTGTT
GTCATTTACTTTATTTTCTTACTTATAGGGTGTAGTACCATTGGAAATCC
AACGATTACATCCCGACTTTCCGCTCGTCATGTGTGATGTTTCATCATGA
AGTATGCATCTGAAATGGTTTGGTTTTGGTTTGAGTATTTATGATGGTTC
ACCGTATGACTTGTAGTGCTGCTCTTCTCGATAGAGAGATTTTCAAAAAT
GACTAAAAAGTCAATAGGCGACGGTTATAGTTACTGTCAGCTTTCTGACG
TATCATTGAAACATAAATGCAAAGAGGTTGTTCCCTCTTGTAATTTGAAT
CAGCAGATGAGCTTATACCTTACAATTTATTAAAAATGGGTTTTACATTT
TACTACGTACATTGTGTGAAAGGTCATTGTGACAAATACATACGAAAAGA
CATTCAATTCATTCGTTTTTCGTCATCTGGTCATTTTCCCACAACTCTCA
TTCTACATCAGCAATAACTTATAATCGTGATTTCCAAAAATCGTTATCAA
AACTGCTGATCAAATTTTTT

Coding sequence (CDS) from alignment at sc0000073_pilon:498872..501041-

>MSTRG.10493.1.p1 ID=MSTRG.10493.1.p1|Name=MSTRG.10493.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=909bp|location=Sequence derived from alignment at sc0000073_pilon:498872..501041- (Clytia hemisphaerica_ch_hm2_pilon)
GGTGTAGTACCATTGGAAATCCAACGATTACATCCCGACTTTCCGCTCGT
CATGTGTGATGTTTCATCATGACCGTATGTACTATGATGAAGACGGGGAC
TTAGCAGAAGAATTTTATGAAGAAGTCACTCCGCAACAAGGAACTCCATG
GATGAGAAGAGTCACCAAAAACCTTACCAAACAGATGGGTTGGTTGAAAT
CAGTATTTTGTGGAGTGAAATGGTTCTTAGGGATCGATGAAGATCAATCG
AATGACTCAAAACTTGCTCCAAAAGCATCTCCATTCGTCGACAGCAAACC
GAGGGTGTAGTACCATTGGAAATCCAACGATTACATCCCGACTTTCCGCT
CGTCATGTGTGATGTTTCATCATGACCGTATGTACTATGATGAAGACGGG
GACTTAGCAGAAGAATTTTATGAAGAAGTCACTCCGCAACAAGGAACTCC
ATGGATGAGAAGAGTCACCAAAAACCTTACCAAACAGATGGGTTGGTTGA
AATCAGTATTTTGTGGAGTGAAATGGTTCTTAGGGATCGATGAAGATCAA
TCGAATGACTCAAAACTTGCTCCAAAAGCATCTCCATTCGTCGACAGCAA
ACCGAGGGTGTAGTACCATTGGAAATCCAACGATTACATCCCGACTTTCC
GCTCGTCATGTGTGATGTTTCATCATGACCGTATGTACTATGATGAAGAC
GGGGACTTAGCAGAAGAATTTTATGAAGAAGTCACTCCGCAACAAGGAAC
TCCATGGATGAGAAGAGTCACCAAAAACCTTACCAAACAGATGGGTTGGT
TGAAATCAGTATTTTGTGGAGTGAAATGGTTCTTAGGGATCGATGAAGAT
CAATCGAATGACTCAAAACTTGCTCCAAAAGCATCTCCATTCGTCGACAG
CAAACCGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10493MSTRG.10493Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10493.1.p1MSTRG.10493.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10493.1.p1.exon3MSTRG.10493.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10493.1.p1.exon2MSTRG.10493.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10493.1.p1.exon1MSTRG.10493.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000073_pilongenomesc0000073_pilon:498872..501041 -