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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000073_pilon:490067..493745- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10492.1.p1 ID=MSTRG.10492.1.p1|Name=MSTRG.10492.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3679bp|location=Sequence derived from alignment at sc0000073_pilon:490067..493745- (Clytia hemisphaerica_ch_hm2_pilon)
AACGAAGTGTAAACCCATCTTCTGCACAATTCAATTAGTCTTCTCTTTGT
ACTTTGTACTGCATATTCTTCTTTGAGACACAAACAAATCTGATATCCGG
ATTTTCAACTGATTGTTTGTTTTGTTTGCTGTCTGCCTATCTATGACGTC
ACAGATAATGTGATGGCTGGCGATTTTGTATTTATCTTCGGTCTATTTGC
TGTTGTTGTTTTCTCGCCATTTAACGATGGCCGGCAATTATCGCCTTCAG
TAAGTGTACAGCCTACTACGGAAAATTGGTTGGAATTGCCAGTTAAAAGT
TTGGCGAACATTGTTTCATCACCTTCACTAACAAAAAGTGCAAATACTGT
TGTTGGGAATAAAAAATCGTTCGTTCGAAAGGAGTCCCTGATTCTCAGTA
ATCCGAAGCCAAGCAATGAGAAAGTCGATCATTTGTTGTCATTTGCTCAT
CAAAACAAACCTGAGAATGGTCAGGCGTTAGCCTCAGAAAACGAATATAA
AAATTCAATAGACAGTGTGAATTATGTTGAAGACCAACAAGAGAGGATGA
ACGAGGATAGACTACTTGAGCAACAGGATATGCTCTCATACATGCCCACT
GAGGGTTTCTTCGCACAAAATGAAAAATTCTTCTTTTAATGATGTCGTTT
CTGGTACTGGGAGAAGCTCATTTCTTCATTATGCGAAACTCTCATCACCT
CATAAAAACCATGTAGTGAACAAGACTTATTTCACTCCTGTGACCCAGCG
AGAAAAAGGTCTAAAGAGATTTGAAGAATTGTTTTTGAAGAATGGAGCAC
AGTACGATGGAGTGAACATTTATAAAGAAACGCCGAAAGACGCGGAAGAG
TTTGAGAATCTCGATACTGCTCCCATATTAACCGATGGAACGAAAAGAGA
TGATAGTAACAGTCAGATGGAAGCCGAAATGGAAGCTCTCCAGCTCAAAA
TGGAAAAGTTGAAGAAGAAAATGAACAAATCGAAAAACGGTCGTCAAAGT
TGGGTCAATAAAGCATTTGGTAAATTAAGCCATGGCCATAAAATCGATTC
AAGTGACATGAAAAATTTGATGTACAAATTGAAGACGCAAGTCATGTCAG
AAGACGATTCTATTGATGGAGCGGATGTCGAGAAAACAGAATCCTCTTTC
GATGAAGAAAAATCCACTTCGGAAGCACCAGTTGACGACAAACTGAAAAT
TCTTCTGGCTGAGCAAGAGAAGATTCCGCCACCGCCATCCAGCAAAGAAA
AACGCCCACCCAAAGATGATGAGGAACTAATCACCGTCAAACCAACTGCA
AAAACCAGGAGATGAGTTACCACCACCAGCTGATATCAAGCCACCCAAAC
CGCCCAGTATTGAGAAAAGACCGAAACCAGGCGATGAACAACCACCCCAA
ACGCTGGTGGACACTCTTCCACCGGTCACCAGTGGCTCCACCATGTTCTT
CTCGTATGATGATGGCACCCCTAATGGTATGACGATACCTAAAACCTTTT
TAGAGACTCGATTCTGGAACTAAAAAGTCGACTTTTTAGTAACTACAGAT
TACAGTCCACCTGTTTCCACCATTTCTCTTTCGAGGAGATGATACTGTTA
TGGGCTCCCTGATAAGCTCTTTACTAACGTATTTTAATGATCTCTTATAC
GTTTCAGGTCCATCATCATGGCAAAGGTTGAATGGTCGTTGGACATGTGA
AGGACGAAAGCAATCACCAATCAACATCAATACAAACACTGTCATTCAAG
ATCAAATCGCTAAAAACATCATCATCAAACAGTTCCCTCCGCATGTCCCC
CTGTCCGGTATCATCAAAAACAACGGACACGCCCCAACTTTTTCTTTAAC
CGAGGGCGTTGCTGTGCGGTTATCGGGCGGAACATTGTTAAATGATTTTT
ACATGAAGCAGATTCACTTTCATTTTGGATGCACTGAGAAAACAGGATCG
GAACATTTCATCGACGGTGTACAATTCCCGCTCGAGGTTTGTCTTTCTTT
GACCATTTTGGGATATCATGGGTGATTAAAGAACTCTTGCTTGATTTGTC
TCTCTTTCCTTTAACGCTTAACGCCCTAGAATCTTCACAAAAATAAAAAG
CATTGTACAATGCACTTTCGAATCTACGAAATTGGGCAATACACCCCTGT
CTTAGTGACCTGGTGAGAATATTTTGAAGGAGCTGGATGCCCATTGAAAT
GCAAATCTTGATGTTTTGAATGAAAATCTGAAATTTTCATGTGTGATTGT
TTCCCACCAGGATGATTGTTCCCGCCTACTCTAATCACAAGTATCATCTT
ACCTATAATAAAAGTCTTCTGTTTTTCAGATGCATTTGGTGTTTTGGGAT
AATTCCACTTACTCGACATTTTCACAAGCAGCCAAAGGAGACAATGGAAT
CGCCGTTGTTGCCATTCTCTTTCAAGTAAGGGAGTATTATATTTATAAAC
GTTTTCTTGATATAACAACACATTTCAAACCTGACAGTTCCAAAAGGGAT
GATTTCTCCTTATAGGGAGGGCTTTCCTTACTAAATAAACAAGGATGGAT
CATCACATCAAAATATAAACCATCGATGTATCTTTTACTTAGCGAGAAGA
CATAACAGGAAGTCAACCGGAAGATTTGACGCCCCTTCATCAAATTACAG
GATTGTTGAAAAACATCAGAGCAGAAGGTCAGTGTTTTGAAGAATCAATT
GTTTTTGTGCGTTCTATATTGTGAAATGTTCAATACAAGGTTGTGGGTTG
ACCCGACCGGGTCAAACCGAAGATTCTCAAATTGTACTTGATGCCTCTCT
GCTTGATGCTCAGCAATTAAGAGAAAGATCAAGGGTAAGTGGAGCAATCC
AGGGAGAAAGAGTTGCGCCCTCCCCTACCTTCGGGTAAATAGCTATCGAA
AAAGGAGCCTTCGGGTCGCCTACGACTGCGGTCGCAGACTTACTTTGATG
AAATGTTCATCCTGAAAACTGTTGCATGTATATTTATAACTTGTCTTATA
GGTGAAGGGTTGGTGATATCGGAAGACTTTGGTGTACAATTCGATCAATT
GGTTCCTTCCATCAAAGACACGCAAAAGGCAGACCGAGTGTTCATATACA
GTGGTTCGTTGTCCACCCCGGGTTGCTACGAGTCAGTCACGTGGATGGTT
TACGCCAACACTCCCCACGTAACAAATAAACAGGTATGGATAGTTAACAA
CTGACAACCAATTATTTTTTCAAAAAGCTTCCTTGGGAAAATGCGTAACT
CTGCTCAAAGAATCAAAATTCTAATTAAATAATTCTCAGGCCAAAGGAAA
TCAGTGCAAGTTTAGTTTTGAAAATTAATTCGCAATTTACAGTTCGGACT
TATTTCATTCTTTCAGTTGCAAGAATTTCGGCAGTTGCGATCGACCAAAG
TGAATCGAGAAGGGACGATGTGTGATAACTACCGTCCGCTACAAAAGACG
TTCGGACGGAAAATTTATTCCAATATCATATAAACAATTGATAATTACAA
TACAATAAACATAAACAAATGATTAGAAAAAACTGGCAACAAATATACCA
AATTGGAAAATGAAATGTCGTGTGTGGAGTAAAGAATTATTAGTATGTTG
ACAATACTGTGAAAGCATAACCCATAAAATTTGGAACGTTGGGCGAAGAA
ATTTGCTGAAAAATTCATCAACGCATCAA Coding sequence (CDS) from alignment at sc0000073_pilon:490067..493745- >MSTRG.10492.1.p1 ID=MSTRG.10492.1.p1|Name=MSTRG.10492.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5058bp|location=Sequence derived from alignment at sc0000073_pilon:490067..493745- (Clytia hemisphaerica_ch_hm2_pilon)
TTGCAAGAATTTCGGCAGTTGCGATCGACCAAAGTGAATCGAGAAGGGAC
GATGTGTGATAACTACCGTCCGCTACAAAAGACGTTCGGACGGAAAATTT
ATTCCAATATCATATAAGTGAAGGGTTGGTGATATCGGAAGACTTTGGTG
TACAATTCGATCAATTGGTTCCTTCCATCAAAGACACGCAAAAGGCAGAC
CGAGTGTTCATATACAGTGGTTCGTTGTCCACCCCGGGTTGCTACGAGTC
AGTCACGTGGATGGTTTACGCCAACACTCCCCACGTAACAAATAAACAGC
GAGAAGACATAACAGGAAGTCAACCGGAAGATTTGACGCCCCTTCATCAA
ATTACAGGATTGTTGAAAAACATCAGAGCAGAAGATGCATTTGGTGTTTT
GGGATAATTCCACTTACTCGACATTTTCACAAGCAGCCAAAGGAGACAAT
GGAATCGCCGTTGTTGCCATTCTCTTTCAAGTCCATCATCATGGCAAAGG
TTGAATGGTCGTTGGACATGTGAAGGACGAAAGCAATCACCAATCAACAT
CAATACAAACACTGTCATTCAAGATCAAATCGCTAAAAACATCATCATCA
AACAGTTCCCTCCGCATGTCCCCCTGTCCGGTATCATCAAAAACAACGGA
CACGCCCCAACTTTTTCTTTAACCGAGGGCGTTGCTGTGCGGTTATCGGG
CGGAACATTGTTAAATGATTTTTACATGAAGCAGATTCACTTTCATTTTG
GATGCACTGAGAAAACAGGATCGGAACATTTCATCGACGGTGTACAATTC
CCGCTCGAGATGTTCTTCTCGTATGATGATGGCACCCCTAATGTTGCAAG
AATTTCGGCAGTTGCGATCGACCAAAGTGAATCGAGAAGGGACGATGTGT
GATAACTACCGTCCGCTACAAAAGACGTTCGGACGGAAAATTTATTCCAA
TATCATATAAGTGAAGGGTTGGTGATATCGGAAGACTTTGGTGTACAATT
CGATCAATTGGTTCCTTCCATCAAAGACACGCAAAAGGCAGACCGAGTGT
TCATATACAGTGGTTCGTTGTCCACCCCGGGTTGCTACGAGTCAGTCACG
TGGATGGTTTACGCCAACACTCCCCACGTAACAAATAAACAGCGAGAAGA
CATAACAGGAAGTCAACCGGAAGATTTGACGCCCCTTCATCAAATTACAG
GATTGTTGAAAAACATCAGAGCAGAAGATGCATTTGGTGTTTTGGGATAA
TTCCACTTACTCGACATTTTCACAAGCAGCCAAAGGAGACAATGGAATCG
CCGTTGTTGCCATTCTCTTTCAAGTCCATCATCATGGCAAAGGTTGAATG
GTCGTTGGACATGTGAAGGACGAAAGCAATCACCAATCAACATCAATACA
AACACTGTCATTCAAGATCAAATCGCTAAAAACATCATCATCAAACAGTT
CCCTCCGCATGTCCCCCTGTCCGGTATCATCAAAAACAACGGACACGCCC
CAACTTTTTCTTTAACCGAGGGCGTTGCTGTGCGGTTATCGGGCGGAACA
TTGTTAAATGATTTTTACATGAAGCAGATTCACTTTCATTTTGGATGCAC
TGAGAAAACAGGATCGGAACATTTCATCGACGGTGTACAATTCCCGCTCG
AGATGTTCTTCTCGTATGATGATGGCACCCCTAATGTTGCAAGAATTTCG
GCAGTTGCGATCGACCAAAGTGAATCGAGAAGGGACGATGTGTGATAACT
ACCGTCCGCTACAAAAGACGTTCGGACGGAAAATTTATTCCAATATCATA
TAAGTGAAGGGTTGGTGATATCGGAAGACTTTGGTGTACAATTCGATCAA
TTGGTTCCTTCCATCAAAGACACGCAAAAGGCAGACCGAGTGTTCATATA
CAGTGGTTCGTTGTCCACCCCGGGTTGCTACGAGTCAGTCACGTGGATGG
TTTACGCCAACACTCCCCACGTAACAAATAAACAGCGAGAAGACATAACA
GGAAGTCAACCGGAAGATTTGACGCCCCTTCATCAAATTACAGGATTGTT
GAAAAACATCAGAGCAGAAGATGCATTTGGTGTTTTGGGATAATTCCACT
TACTCGACATTTTCACAAGCAGCCAAAGGAGACAATGGAATCGCCGTTGT
TGCCATTCTCTTTCAAGTCCATCATCATGGCAAAGGTTGAATGGTCGTTG
GACATGTGAAGGACGAAAGCAATCACCAATCAACATCAATACAAACACTG
TCATTCAAGATCAAATCGCTAAAAACATCATCATCAAACAGTTCCCTCCG
CATGTCCCCCTGTCCGGTATCATCAAAAACAACGGACACGCCCCAACTTT
TTCTTTAACCGAGGGCGTTGCTGTGCGGTTATCGGGCGGAACATTGTTAA
ATGATTTTTACATGAAGCAGATTCACTTTCATTTTGGATGCACTGAGAAA
ACAGGATCGGAACATTTCATCGACGGTGTACAATTCCCGCTCGAGATGTT
CTTCTCGTATGATGATGGCACCCCTAATGTTGCAAGAATTTCGGCAGTTG
CGATCGACCAAAGTGAATCGAGAAGGGACGATGTGTGATAACTACCGTCC
GCTACAAAAGACGTTCGGACGGAAAATTTATTCCAATATCATATAAGTGA
AGGGTTGGTGATATCGGAAGACTTTGGTGTACAATTCGATCAATTGGTTC
CTTCCATCAAAGACACGCAAAAGGCAGACCGAGTGTTCATATACAGTGGT
TCGTTGTCCACCCCGGGTTGCTACGAGTCAGTCACGTGGATGGTTTACGC
CAACACTCCCCACGTAACAAATAAACAGCGAGAAGACATAACAGGAAGTC
AACCGGAAGATTTGACGCCCCTTCATCAAATTACAGGATTGTTGAAAAAC
ATCAGAGCAGAAGATGCATTTGGTGTTTTGGGATAATTCCACTTACTCGA
CATTTTCACAAGCAGCCAAAGGAGACAATGGAATCGCCGTTGTTGCCATT
CTCTTTCAAGTCCATCATCATGGCAAAGGTTGAATGGTCGTTGGACATGT
GAAGGACGAAAGCAATCACCAATCAACATCAATACAAACACTGTCATTCA
AGATCAAATCGCTAAAAACATCATCATCAAACAGTTCCCTCCGCATGTCC
CCCTGTCCGGTATCATCAAAAACAACGGACACGCCCCAACTTTTTCTTTA
ACCGAGGGCGTTGCTGTGCGGTTATCGGGCGGAACATTGTTAAATGATTT
TTACATGAAGCAGATTCACTTTCATTTTGGATGCACTGAGAAAACAGGAT
CGGAACATTTCATCGACGGTGTACAATTCCCGCTCGAGATGTTCTTCTCG
TATGATGATGGCACCCCTAATGTTGCAAGAATTTCGGCAGTTGCGATCGA
CCAAAGTGAATCGAGAAGGGACGATGTGTGATAACTACCGTCCGCTACAA
AAGACGTTCGGACGGAAAATTTATTCCAATATCATATAAGTGAAGGGTTG
GTGATATCGGAAGACTTTGGTGTACAATTCGATCAATTGGTTCCTTCCAT
CAAAGACACGCAAAAGGCAGACCGAGTGTTCATATACAGTGGTTCGTTGT
CCACCCCGGGTTGCTACGAGTCAGTCACGTGGATGGTTTACGCCAACACT
CCCCACGTAACAAATAAACAGCGAGAAGACATAACAGGAAGTCAACCGGA
AGATTTGACGCCCCTTCATCAAATTACAGGATTGTTGAAAAACATCAGAG
CAGAAGATGCATTTGGTGTTTTGGGATAATTCCACTTACTCGACATTTTC
ACAAGCAGCCAAAGGAGACAATGGAATCGCCGTTGTTGCCATTCTCTTTC
AAGTCCATCATCATGGCAAAGGTTGAATGGTCGTTGGACATGTGAAGGAC
GAAAGCAATCACCAATCAACATCAATACAAACACTGTCATTCAAGATCAA
ATCGCTAAAAACATCATCATCAAACAGTTCCCTCCGCATGTCCCCCTGTC
CGGTATCATCAAAAACAACGGACACGCCCCAACTTTTTCTTTAACCGAGG
GCGTTGCTGTGCGGTTATCGGGCGGAACATTGTTAAATGATTTTTACATG
AAGCAGATTCACTTTCATTTTGGATGCACTGAGAAAACAGGATCGGAACA
TTTCATCGACGGTGTACAATTCCCGCTCGAGATGTTCTTCTCGTATGATG
ATGGCACCCCTAATGTTGCAAGAATTTCGGCAGTTGCGATCGACCAAAGT
GAATCGAGAAGGGACGATGTGTGATAACTACCGTCCGCTACAAAAGACGT
TCGGACGGAAAATTTATTCCAATATCATATAAGTGAAGGGTTGGTGATAT
CGGAAGACTTTGGTGTACAATTCGATCAATTGGTTCCTTCCATCAAAGAC
ACGCAAAAGGCAGACCGAGTGTTCATATACAGTGGTTCGTTGTCCACCCC
GGGTTGCTACGAGTCAGTCACGTGGATGGTTTACGCCAACACTCCCCACG
TAACAAATAAACAGCGAGAAGACATAACAGGAAGTCAACCGGAAGATTTG
ACGCCCCTTCATCAAATTACAGGATTGTTGAAAAACATCAGAGCAGAAGA
TGCATTTGGTGTTTTGGGATAATTCCACTTACTCGACATTTTCACAAGCA
GCCAAAGGAGACAATGGAATCGCCGTTGTTGCCATTCTCTTTCAAGTCCA
TCATCATGGCAAAGGTTGAATGGTCGTTGGACATGTGAAGGACGAAAGCA
ATCACCAATCAACATCAATACAAACACTGTCATTCAAGATCAAATCGCTA
AAAACATCATCATCAAACAGTTCCCTCCGCATGTCCCCCTGTCCGGTATC
ATCAAAAACAACGGACACGCCCCAACTTTTTCTTTAACCGAGGGCGTTGC
TGTGCGGTTATCGGGCGGAACATTGTTAAATGATTTTTACATGAAGCAGA
TTCACTTTCATTTTGGATGCACTGAGAAAACAGGATCGGAACATTTCATC
GACGGTGTACAATTCCCGCTCGAGATGTTCTTCTCGTATGATGATGGCAC
CCCTAATG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000073_pilon | genome | sc0000073_pilon:490067..493745 - |
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