MSTRG.10475.2.p1 (mRNA) -

Overview
NameMSTRG.10475.2.p1
Unique NameMSTRG.10475.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000073_pilon:238902..245410-

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10475.2.p1 ID=MSTRG.10475.2.p1|Name=MSTRG.10475.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6509bp|location=Sequence derived from alignment at sc0000073_pilon:238902..245410- (Clytia hemisphaerica_ch_hm2_pilon)
ATCTTACACTTACATATCATAACATTCGTAAGTCACTTAGACATTATTTT GCATGATCCAAGTATAATCAAATTTACGAATCATATAGTAGACTCAGGTT GAGCCCGAGTCAAAGTTTAGATTCACATCGATCAGTCGTCAAGCACAAGA AATCGATCTAGAGACTCCCCCAGTCGGGTGTTTAAGATAAAAACTGCAAT TATTGCTCTTTTCGGAAATTATTGCCGAAAACGGCAATTTTTTTTAACGA TGAAATGCTGAATCAGCAAAATGTGTTGTCCTTTTAAGGGCAAAGATGTC AGAGGTGTTTGAAAATAGTAAAATTGCATCGAGAAAAAGGTTTTTCGGAT TTTTAAAAGTGATTTTTTCAATTTTTCGTTGCTCAATAACATGAAAAGTT CTAAAATAATAAGTTAAAAGATCCTGCATCGATGCCGAAACACAGCCAGA AAGAGATAACAAAACCCCCGTTGTAAATTTGTTTACATATGACTCGATTT TGCTATCTGCATTTCCAACAAAAACCAGTTGAAAACAAAACTAAACGAGG CACAGTGGGCCTACTTATCGCGAGGGTGTCAAATACCACGTGTTCAATAA TAAAATCAACTTTTATTTGCAAAAACGGCAATAATTGCCGAAAACGGCAA TTTTCATTTATTTACTTTTTTATTTTTCTGCTGATTCAGCATTTCATCGT TAAAAAAAATTGCCGTTTTCGGCAATAATTTCCGAAAAGAGCAATAATTG CAGTTTTTATCTTAAACACCCGACTGTCCCCCACTGCACTGGTTTGTAAG AGTTTATATTATATAATTTTCTTCGAGACTGGCTTCTTTTTAAAGCACTT CTATGTTCTATGCCTATGGGTGCTTATCATCAAAATCATCAAAGGCAATG CACCGGACGCATCAGACACTGTGGACAGGTTTTTGCTTTGGCATTGGATG ATTATCACCAGACGTCCGCGCTCGATAGGATCGATCATCAGAACAGATCG GTATGTGATCGATGGATTACTTAACGATCCGGATAGGAGATCGATGGAAG ATTCAGCCATTAAAAAGTCTTGAGTATCGATCCTTTGTTGATCCATTATC GAGCTAGTATTTCAATTGAGTATATACCGATTCGTCATCGATCATTAATC GATTCGTCATCGATCATTAATCGATTCGTCATCGATCGTTAATCGATTTG TTATCGATCGTAAATCGAGTATGAGTCGATAGGGTCGATAAGATCGATAA AAGATCGATGATAGATCGATAAATAATCGATATACTAATGTTAAGGGGAG CCGTCCATATTCATTTGACAACGCAAAACGTCAAATTGACGTTATGAGAG GGTGGGGGGTTTTCAAAAGTTAGGTTTGACGTTATAAGAAATCAAAGGTA TACCTTTTTGTGAAAATCGCGGATATTTGTAACCACCAACCACACTATAC TTTATAAGCTTTCGAAAACATATTCGTGTATGAAGTATATGAAAATTTGC TGCTTGCATAATCCCATTGGTTTGCGCTATGATATCATTACATCATATTT TCATTGTTTGCGCGATCGAGCGAACCACATCGCACAAGTGGGCAAAGAAG GTGGTACGCCTAAAGCACGGCACCAACCTAGCGCCAAGTGGAGATTTTAA TTTCTTTTTAAATAAAGGTCATTAGTTAAAAGAACACATACACGTACAAC CAAGTACGGACTTTGCGACGGAACGGGTTAACTTTGATGAAAAATGGCTA CAACTTTTGGTATACATCAGTACATCGCTTGACGTTATCTGTGGGGGGTA GGGGGGTTCAGAGGATAACGTCAATTTGACGTTTTGCGTTGTCAAATAAA TATGGACGGGTCCCCTAAGCTTAAAAAAATCTAGATTATCGATCCTCTAT CGATCTCCTATCCATCAATCACATATCGATCCGTCATCAAGCCGTTACGA TGATCAATCCTATCGAGCGCGGACGTCTGGTTATCAGGGTGGTAAAAGTT TTCTCACTGAACACCAGGTATTAGCCTTTAGTGCTCCTGTAAGTGGTGGG TAGGCAGGGTTTTTTTTGTGTATCTATCTATTTAATAAGTGACATACCGT AAGTTGGCATAAAATACCATCAAGTGTCCTGTACGCAAATCGATCTTTTG TCCCGCTGAACACCTGCATCCTCTGTTTGTCCCGTATTTTCAAATATTCA TTAGAATTACACTCAAAGTCACACAAAAATGACAAAATTCAGCCAACAAC GAGGAAGATGATTGATTAATCCAGGCGATGTCAATCGAAAATCAAAATCA ATTGAACTTAATCGAACGATAGGTGTTCGATTAGGTCACAAGTGTTACGC GTAAGCCAAATCGCGTATTACGAACAACCTCTAAATTGCCGAGTAGGTAC CGGTTGAAACACTTGTGAGAGGTCAGACACAATTTATTGTTTGGTTAGTG TCCTAGAAGCTCTAAAAAATGGGTCGGTCAGTAGCTAAAATTGGATAACC TTTTTTTTATTTTTCCCACCAAAAACCTCAATTTTTGAAATCATCCATTC TTCGAGCAATTGCACAATCCTGGATTCCAACACAATGGTATAAGCTGCCT TATTTTATATTTCGTTTCTGTGCGCGAAGTGGATGTGGACATGAAAAGGA GGAAAGAAGGATTTGATTTTTCTGACTCAAAATGAAGCATTTTTTCTCAA ATACTTAGAGTCAGTCTGAGGACACAAATATCAATTGGGCCTGGCCTTAC CAAACCGAATCGAACAGTCATTAAACTGAGAAATTCCAGTAAAGTTTGAT TACTTCGACTGATTCGATGTGCTTTTGTTCACAAATCATTCTTGCAGCGC ATGAACAACTCTTTTCTGTTAATCCAATGATTCTTGGGGATCGTTTAGGC TAGAGCTGTTGCGCTAACAATAACAGGAACCATTTGAGCTACAAAAACAC TGACGGTCTAATCTTAAACTCCTATATCAGGATTAGAAACTAGGGCTAGT CTTATTTCTTTTATCTTCTCCTTTGATCAATACAATGCTGACAAGTTGAC CAGAGTTGACACAACACATTGACAAGTAATCCCTGAGAAAAGTTTATATA TTAAAATTCTGCAACAAAAACGAAAGTGGTCTCTTCTACTGATTGCTTTA TCAACACTCCTTACAGCTGTTTATCAAATTTCTACCAATGAGGTTGCCGT ATTTCAAACGCCCCTTCCTTTTGGCACTCATGGCCTTTCAGTGCCTTGCA CGGCTGGCGGCTGTAAAATCCCCCCTTCATATATTTGTTTCAATCTGTGA TTCTAAGGCCTTGGGATTTTCTCATCCTTCAATTTTCTGAAGAAAGCGGG AATCCAATGCAAGAGTTAGATTGTCAACAAAGTGCCATAAAAAATCATTG AATAAAAGAAGAAATTTAAATCTTAGATATTTTCATTTTGAAGAATTGGT GCCAGAATGAAACATGGAAAAGTTTTATTTTTTATTGGTTCAATCGAAAT AAGGGAATTTAGAAAACTTTCTATGTTTGGTTTTTTGTAGAAACTCCTGT AACTATGGGCAAGTACCCCGTTGCTAAGATGTTAGTTTGAAATCGAAAGT GAAACCACTGAAAATGAAAGTAAAATTGGTCCGCACTCCAAATCCCGTAA TCTTGAAATTTGATGGTTCAATTAAGAAAATTGGTTCAATAGGGTTCGGT TGACTTTGCCTGGATTTATGATAAAAAAGTCATTTAATTAACATAACTGC GAGATTTAATAGCCCCTCGTCAAGTAAGGCATTGTAATACCACAGGCGTC AAAAAGAAGGGCAGTGTGAAATGCGACAATCTTATTGGTGGAAATTAAAT ATAAACAGTCTGCGAAGGAGCACTACAAAGCAATCAGTTGAAGAGACTAC TTTCATGGAAGAGAAGAAAATATCTATCTCATCTAAAATTTGAGTAATTT GGTTAGGAACATTGATCTAAGCTTATAAAAAGTGATTCTTATGGATAAAG AAACCAAGATTTTGTGATTATAAATAGTGATTCTTATAGAAGAAGAAGGA TTTAATATAAAAGAATCGTATCATCTAATCTTATTGTTATTACTATGATA AGTTATTTTTTGGACCTACCTTGGAGGTTCTTTAAATTAACCCATGACTT TTTGTGAAATTGCTTCATTTGTTTTTCAGATTTTTTGTGTAAAGATGCTC TGAAAAGTGGCTGAAGCTGTTTTTTCCGGATATTTTCTTTGACCGACAAA ATTGGATTTTCTTATTTGGGACCATTCAAAAAGTATGTACGCTCGAAATG GCTAATTTTTGACTCCCCCTCCCCCTTTTACGCTTTCGTACGCTTTATGG TGTACCCCCTTCAGCGTATGTACGCTTTTTAGTACACCCCCCCTAACCAA AGTCGAAACTTGAAACTCTTGTAACAGTAGAATATGTATATGTATTTATA ACAAAGTTTCAAGAAATTAAAAGAATCTATAAAAATACCAAAGGAGAAAT GAAAAATAACAATCGCAAAAACAATTTTTTGATGTGAAAATATTGCGGTT TTCTCTCAAAAAAGACAGTTTAGGAAAAGTTACGAGTGTACGTACTTCTC CTCGAGGACCCCCTTCCCCTCGTACGCTTTTAGGAGTACCCCCCTCCTCC CTCTCAAGCGTACGTACTTTTTGAATGGTCCCTTTGGGGAGATTCCTTTT TTTGTCATTAATAAGGGAAATGAGCATTTTATATCCTTACAGGGGATGGT TAATGGAACAGCCCAATTGGCTTGGGCTATTTTCTGATTTTTTAGTTTAT AGTAGGGGGAAATTTGTAAAATCACCCGATTTTTTTAGTCAAAGCACTTG TTATACATTTTTGGAAAGTACAACTATAGAGGAGTCCGAATTTCAATGTT TCCAATTTTTTTTCGGACACTTTGGTGTGATTTTCAGAAAATATGACAGT CTCAGGCAAAAATCATAGGGTTAAAAATTAATGAAAATTTTAGCTTGAGA AAACGGAGACCTGTTGTATATTTTTGGAAAGCTCTCAAAAAATTAGGATT AGAGATATATTGCAAGTATAGGTGATTTCAGTACCTAACTCGAAAATATT GAGCTTCAAAAAGCGTAAAAACTGGACAAAACAGCTGTTTCTGGCTGAAA AACACGGTTTTCAGGGTTGATATCTTGAGATAGGTACAGAAATCACCTAT AATTGCAATATATGTCTAATCTTAATTTTTTGAGAGCTTTCCAAAAATAT ACATCAACAGGTCTTCCTTTTTCTCAAGCTAAAATTTTTATTAATTTTTG ACCCTATGATTTTTGCCTGAGACCGTCATATTTGTCCGAAAATCACACCA AAGTGTCCGAAAAAAAAATTGCAAACATTGAAATTTTGATTCCCCTACCC CTTAGCTTTCCAAAAATGTATAACAAGTGCTTTGACCAAAATAATCGAGC GACCTCAAAAAAACAAACAAATTTCCCCCCTACTATTATATTTTCAAACT TTCTTTGCCATTTTTTGTTATATTAACCTTCCGATCTGTTCCGATAGGTC CATTCAGCATGCAGCTTGTTCTATTTGAAACTCCAGATGATCTTTTCAAC AAGCATTAAATCACTATCTTATTCAAACTATATTAAAAGTTAGCCTTTTT GTCTCCCTGCTGTAGATTACTTTTTAGCATCTTTCATCAGTATTTCAGCT TATTTTGGGAATTTTCTGTTTTAAAGAGAATGAATTGGATCGGAGGAGCA AGAAGTAGATTAAATAGAAGAAATGAAAAAAGAAAGCAGGAACAGTTTTT TGAAGATAAACGAAAAGCAAAACAGTTGAATAATACCACTGTCACCAGCC ATTTTCAAAGTAGCAGCTTACATCTGAGCCAAGACATTCTGTCCATCAAA ACTCTTTCAAATGCATACAGTGAAAAATCTGTGGAAAGTTGTAAACCACC AAAACATGCGAGATTTGTTGATTTAGAGCATGGAAAGTCAAACTCTAGAT TTGTAAGCCTTAAAAGTCATGATGACAGCTTCGAAAAGAATATCAAGCCC TCAAAACTTCCTTTAGGTGAATACGATGAGACATTGAGCAAGTCATGTTT TCCTAAAGAAAAAGTGGACTTTTCAATTTGTAAAGGAGTAAATAAAATGG TTGATTTTCTCGACGAGTCTGTTATTGAAGAATCAAAAGCCTATGAAAAG TGTCTTTCAAGTTCTGAGGAAAGCCTTGTAGAAGAAGCTGAAAATGTTGT GCTCAAGGACACTGTTAAACTTCAACAGAAAGAAATCAAGAAAGTCAACA AAGAGTCAAACTTACCCACAATGACCAAGTCACAAGCTAATGAGAAAATG AAAGAGATCAAAAGCTCAAACGCCTTCTTCAATCTCTTTAATTGCTAGCC AATGGATAATATCTCAATGGAGAAGTTGTGTTTTACTATTACCAGTTTCA TTTGGTCTTGAATATATACATTTAGCCTTTATAAGAACTATGAATTTAAG ACTCGTTAG

Coding sequence (CDS) from alignment at sc0000073_pilon:238902..245410-

>MSTRG.10475.2.p1 ID=MSTRG.10475.2.p1|Name=MSTRG.10475.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=714bp|location=Sequence derived from alignment at sc0000073_pilon:238902..245410- (Clytia hemisphaerica_ch_hm2_pilon)
GTGAATACGATGAGACATTGAGCAAGTCATGTTTTCCTAAAGAAAAAGTG
GACTTTTCAATTTGTAAAGGAGTAAATAAAATGGTTGATTTTCTCGACGA
GTCTGTTATTGAAGAATCAAAAGCCTATGAAAAGTGTCTTTCAAGTTCTG
AGGAAAGCCTTGTAGAAGAAGCTGAAAATGTTGTGCTCAAGGACACTGTT
AAACTTCAACAGAAAGAAATCAAGAAAGTCAACAAAGAGTCAAACTTACC
CACAATGACCAAGTCACAAGCTAATGAGAAAATGAAAGAGATCAAAAGCT
CAAACGCCTTCTTCAATCTCTTTAATTGCTAGCTTACACTTACATATCAT
AACATTCGTGAATACGATGAGACATTGAGCAAGTCATGTTTTCCTAAAGA
AAAAGTGGACTTTTCAATTTGTAAAGGAGTAAATAAAATGGTTGATTTTC
TCGACGAGTCTGTTATTGAAGAATCAAAAGCCTATGAAAAGTGTCTTTCA
AGTTCTGAGGAAAGCCTTGTAGAAGAAGCTGAAAATGTTGTGCTCAAGGA
CACTGTTAAACTTCAACAGAAAGAAATCAAGAAAGTCAACAAAGAGTCAA
ACTTACCCACAATGACCAAGTCACAAGCTAATGAGAAAATGAAAGAGATC
AAAAGCTCAAACGCCTTCTTCAATCTCTTTAATTGCTAGCTTACACTTAC
ATATCATAACATTC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10475MSTRG.10475Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10475.2.p1.exon2MSTRG.10475.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10475.2.p1.exon1MSTRG.10475.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10475.2.p1MSTRG.10475.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000073_pilongenomesc0000073_pilon:238902..245410 -