MSTRG.10461.1.p1 (mRNA) -

Overview
NameMSTRG.10461.1.p1
Unique NameMSTRG.10461.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000073_pilon:40859..42824-

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10461.1.p1 ID=MSTRG.10461.1.p1|Name=MSTRG.10461.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1966bp|location=Sequence derived from alignment at sc0000073_pilon:40859..42824- (Clytia hemisphaerica_ch_hm2_pilon)
TTTAATCTTCTTTGTTTTTATTTACAGGAAAAACAGAAAATATAATATAA
AAAATGAAAAATCGAAATTTTTCAAAAACTTTCTACTTCAGGTATGTAGA
AAATTTTTGTTCGATCTTCCCGTTAATTTATTGCCCTGTAATTACGTGGG
TTAAGCTTAAGAAAGCCTGAGGCACATCAAGAATTTTGATCACTGATTAT
CTGATCAGATATCACTTTCATGATAATATTAATCCTTTGCCATATCTCTT
GTGAAACAAATCGGCTCTCGCAGTTTGCCAAACGATTTCCCAATCCCTAT
TTCTGTATCATGAATCAAATTAGGTCGGAAATGAATTGCAGTCGTTATTG
AATAACCCTAAACAACGGAAAGAAGGGGCGACTTTTGATCATTCTAACGG
TCTTGGGCATTTCCGTATCTCATCAAACAATTAATTTCGACAACGTCACA
ACACCATTTCCAATTAACTGTTATCATGAAGTTGAATCTCTCTCGGCCTT
AACTTGTACTTTTTTTGATTTCTTTTGATGCTCGAGACTTTTAATGATTT
TATCTCAAATCATACAAACTTATCCTGATAAAATCTGTTGTGAACGACTA
AGGTGATGGGATTCCCTTTCTCTCTCTTCCCTTACTCATGTTAAGCCACC
ATCTGTTGCAGACATTTTGATTCATCTCTTTTGAAGGGATGTTAATTTTG
CTGGCTCCTCTCTAGGCGCAAACTTTTCTTCCTTCCTTAATGCGTTGATT
ACTGGTGATGATTAGATGTTAAGTTAATTTAAGTGATTATAGTAAGATAA
GTAAATAGCTGTTCAATTACCTAAAAACGCTAAACAAGAATTTTATTGTT
TTCAATTATCACGTTTTTTGATGAAACATTAATATGCTTATCTAGCATCA
CCGAGAACCCCCTTGAAATTCTCCACTTTTACATCTTAATCTTCAATGGG
TAGACAGCTTATCAGGGGGTAATGATATCATCTTCTAAGATGTAGTAATT
ACGTAAACAAAAACAACAACAATGATCAAGCAGTATAAAAGGGGTGATCA
ATATTCTTCTGGCATCACTTCTCATCGTCTCTTCTCTCCATTAACATCAT
TGATAAGTAAAATTTTAAGTATTCATTCACTACTTCATCAAACACATTGT
GGTGTGGTTTTCATTTGTCACAAGGTAATTACATACATGCGTATTTCTAT
TGGAAATCATTATTCTCCAATCAAGTCCGTTTTCCTTGTTTCGTGTTTGT
TTCCATCTATATAAACACAACGTTCTCTCATCATCGAATTATTTCTCTTT
CTCACTTCAGAAACAAGTTGCAAGAAGAACCATTCAATCTTTCTTTTCAA
ACCTCGTGAAGAAAAATGTTTCGAACCAAAGGTAAGCATCATCGCTTGTT
ATTTCAATCGAAATCTTACGTTGTTTTTTTTTAGTGGATACTTTTTTCTT
CAAAACATTTCAATGGAAGTATTGGCGTTTTTGGGGTTGAGCTTCATTCT
TAGTGTTTCCGCACTTCTTTTTCAGGACTTTGCTTGTTGGTTTTCATGGT
GATACTTGTGGCGCTATCGCATGTAGATGCACGACCTTCAAAGGGCAAGA
AAAGGAAATGTGTGACCAACTGCAGAATCAATTTGGACCAATGTTTCACT
ATTGCGAGAGGTTTCTCAGAAAAGTCCATCTGTTTCGAAGCGAAGAAGAT
CTGCAAAAATAAGTGCAAATTGATATCAAAGATTGGAAAATTATTGCGAG
CAAAGAAAATCTAATTTATCTTTATAATAAAGCGTCATCCCCGTGTTCTG
TTTCAATCAAAGCTATTTATCTTCATGTAATTTTATTTGTATTTTATCCA
TTCTGTAAATAAAGAAGCAGATTATTTTATAAATATTGTAAAAGAAAAAT
TTGTATTTATTCAATTTTTATATTTTTTAGAATTTATCGAATAAATTTTC
AAAAGTGAAAATGAAA

Coding sequence (CDS) from alignment at sc0000073_pilon:40859..42824-

>MSTRG.10461.1.p1 ID=MSTRG.10461.1.p1|Name=MSTRG.10461.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1044bp|location=Sequence derived from alignment at sc0000073_pilon:40859..42824- (Clytia hemisphaerica_ch_hm2_pilon)
GACTTTGCTTGTTGGTTTTCATGGTGATACTTGTGGCGCTATCGCATGTA
GATGCACGACCTTCAAAGGGCAAGAAAAGGAAATGTGTGACCAACTGCAG
AATCAATTTGGACCAATGTTTCACTATTGCGAGAGGTTTCTCAGAAAAGT
CCATCTGTTTCGAAGCGAAGAAGATCTGCAAAAATAAAAACAAGTTGCAA
GAAGAACCATTCAATCTTTCTTTTCAAACCTCGTGAAGAAAAATGTTTCG
AACCAAAGTTAATCTTCTTTGTTTTTATTTACAGGAAAAACAGAAAATAT
AATATAAAAAATGAAAAATCGAAATTTTTCAAAAACTTTCTACTTCAGGA
CTTTGCTTGTTGGTTTTCATGGTGATACTTGTGGCGCTATCGCATGTAGA
TGCACGACCTTCAAAGGGCAAGAAAAGGAAATGTGTGACCAACTGCAGAA
TCAATTTGGACCAATGTTTCACTATTGCGAGAGGTTTCTCAGAAAAGTCC
ATCTGTTTCGAAGCGAAGAAGATCTGCAAAAATAAAAACAAGTTGCAAGA
AGAACCATTCAATCTTTCTTTTCAAACCTCGTGAAGAAAAATGTTTCGAA
CCAAAGTTAATCTTCTTTGTTTTTATTTACAGGAAAAACAGAAAATATAA
TATAAAAAATGAAAAATCGAAATTTTTCAAAAACTTTCTACTTCAGGACT
TTGCTTGTTGGTTTTCATGGTGATACTTGTGGCGCTATCGCATGTAGATG
CACGACCTTCAAAGGGCAAGAAAAGGAAATGTGTGACCAACTGCAGAATC
AATTTGGACCAATGTTTCACTATTGCGAGAGGTTTCTCAGAAAAGTCCAT
CTGTTTCGAAGCGAAGAAGATCTGCAAAAATAAAAACAAGTTGCAAGAAG
AACCATTCAATCTTTCTTTTCAAACCTCGTGAAGAAAAATGTTTCGAACC
AAAGTTAATCTTCTTTGTTTTTATTTACAGGAAAAACAGAAAATATAATA
TAAAAAATGAAAAATCGAAATTTTTCAAAAACTTTCTACTTCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10461MSTRG.10461Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10461.1.p1.exon3MSTRG.10461.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10461.1.p1.exon2MSTRG.10461.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10461.1.p1.exon1MSTRG.10461.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10461.1.p1MSTRG.10461.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000073_pilongenomesc0000073_pilon:40859..42824 -