MSTRG.10438.1.p1 (mRNA) -

Overview
NameMSTRG.10438.1.p1
Unique NameMSTRG.10438.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000072_pilon:1110713..1112310-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10438.1.p1 ID=MSTRG.10438.1.p1|Name=MSTRG.10438.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1598bp|location=Sequence derived from alignment at sc0000072_pilon:1110713..1112310- (Clytia hemisphaerica_ch_hm2_pilon)
GTTGATGGAAAGGAAACGTTAACGACCTACAGCTTGGATAACTGTTTCCA AACAATGGCTGTCAAAAGCTACGCAACCACGCATGCTTTGTAGTAAGAGT GTGTTTTTATTACCCACAATCCAACTCCGAGTATATCTATCTTTACAACA ATAGACTCTCTCTAGACGATTTTCATCTAAGAGGAACAAACGTGAAGACG GAAATTTTTGGGGGGTAACTGTAAACACAGACTCTATCGGCGGCGCAACA TATTACGTTTTATTGTATACAAACTATGTTATATCATAATAATATGTTAT ACGGACAATAGCATCGTCTAGACTCTCGCTTATTCGAGTTTTTATCACTA GAATCTTTCTATAATGTGAACTTGTTTCCAGTCCCCGTCAAAAAGGAATC CTCTGAAGATACTTTCTAAGAGTCGAATCTGACTGTGATATGATCAAAAA TAAGCTCCCTAAAATTGTTCAAGTTGGAATAATTAGCGAGAGTTAACCAT AGTCAAGATATCAAAAGCAGAGAAAATTATAAATGTATTTGTTGTTTTCT AATTTGCTTTTGAATGAAAATTATAATAAAAAAACATGATTCCCTTTTTT TATTACCAGCAAAGCCTTGGAAAGTCAGTCTAAAATTGGAAGTGATCTGC AGATGGGTTATGAAACTGATGTGTCGGCTGGTGTCCCTGGTCTTTCTGTT TCTTCAACCATCCCGCCAGCTTTCACACATGCTTGGTTGGAATCAGAAAC AATGAAGAACGCGGGTGCTTCATTTTCTCACGATCAGAGCGTGATGACTC TAAGTTGGGGGTGTGCCTTCAGTATGAGATGAGATTCAGTAGTTATGATG TCAATGCGTTCACATACACATTTACACTTGCTCTTGGAGAATTACACGAT GCAAGTTCACAATCATCAACTTCTAAAAAAGCAGCCTTCGACAAATTCAT CGGCGACTATGGCACACATTACATGTCGGAGTCGCAATTAGGTGCATTTT GGGCACAAAAGACTACATATTCAGGTATTTCGACTTTTTTATGAAAACTA ATTAAGAACATAATATTTGTTCGGTATGTAATATGTTATCGGACAGTCAC GAGTACAATATGAGAAATATTTTAGGAGTTCCGAGATTTTTCTGTACGAT ATTTTCCAAGCCTTTAGGCTAGGAAAATATACGGAAAATCCGGAATTAGT TTGAGTATTTGAGTATTTTCTGCTTGTAACTTTTCATAAAAGCCGGTTCT TTCTTTTTGAGGTGTGAGAAAAGTCATTTTACTGTACTCGCATAGCCTGG TACCCATAAATGCTTTTTTTACCCTGTTACTCTGAGAACTTGTAAATTGA ATAGAAGGACCTAAGGCAAGAACGCGTAAGCACCTATGAAAGCAAAAAGC ACTTCTATTCACTGAAACTTTTTATTCACTTATTTTTAGGTACTGTCCGC AAACAGGTGAGTTTCGATGCACTTCAAGCATGTTCAGCTAAAAAAGCGGC TGACATCTTTGGCATGTCCGTGGGTAACGACGAGGCTGATTGTTCAGCCG AAGCACAAGCACAAATTGACAGCTTCAGCCAAGATGAGGTTCAACAAA

Coding sequence (CDS) from alignment at sc0000072_pilon:1110713..1112310-

>MSTRG.10438.1.p1 ID=MSTRG.10438.1.p1|Name=MSTRG.10438.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=708bp|location=Sequence derived from alignment at sc0000072_pilon:1110713..1112310- (Clytia hemisphaerica_ch_hm2_pilon)
GTACTGTCCGCAAACAGGTGAGTTTCGATGCACTTCAAGCATGTTCAGCT
AAAAAAGCGGCTGACATCTTTGGCATGTCCGTGGGTAACGACGAGGCTGA
TTGTTCAGCCGAAGCACAAGCACAAATTGACAGCTTCAGCCAAGATGAGG
TTCAACAAATGAGATTCAGTAGTTATGATGTCAATGCGTTCACATACACA
TTTACACTTGCTCTTGGAGAATTACACGATGCAAGTTCACAATCATCAAC
TTCTAAAAAAGCAGCCTTCGACAAATTCATCGGCGACTATGGCACACATT
ACATGTCGGAGTCGCAATTAGGTGCATTTTGGGCACAAAAGACTACATAT
TCAGGTACTGTCCGCAAACAGGTGAGTTTCGATGCACTTCAAGCATGTTC
AGCTAAAAAAGCGGCTGACATCTTTGGCATGTCCGTGGGTAACGACGAGG
CTGATTGTTCAGCCGAAGCACAAGCACAAATTGACAGCTTCAGCCAAGAT
GAGGTTCAACAAATGAGATTCAGTAGTTATGATGTCAATGCGTTCACATA
CACATTTACACTTGCTCTTGGAGAATTACACGATGCAAGTTCACAATCAT
CAACTTCTAAAAAAGCAGCCTTCGACAAATTCATCGGCGACTATGGCACA
CATTACATGTCGGAGTCGCAATTAGGTGCATTTTGGGCACAAAAGACTAC
ATATTCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10438MSTRG.10438Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10438.1.p1MSTRG.10438.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10438.1.p1.exon3MSTRG.10438.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10438.1.p1.exon2MSTRG.10438.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10438.1.p1.exon1MSTRG.10438.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000072_pilongenomesc0000072_pilon:1110713..1112310 -