MSTRG.10408.1.p1 (mRNA) -

Overview
NameMSTRG.10408.1.p1
Unique NameMSTRG.10408.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000072_pilon:678807..680790+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10408.1.p1 ID=MSTRG.10408.1.p1|Name=MSTRG.10408.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1984bp|location=Sequence derived from alignment at sc0000072_pilon:678807..680790+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTCAAAAGAAAGCTTGTCAGGGGATGGCAACCattttaagaaaagaaaa atatgtttcaaaTCAAGGACACTCTACTGTATcataagacgagtttcatc taaaaggaacaaacgtgaagacgggagtAGCTGTTgtcgtaaacacagac tctatccgccgcgaaacatattacgttttataatatacaaactatgttat atcataataatatattatacggacgatagcatcgtctactgTATCATCAT TGTCATCATAAAATTTAGTTGACATTCTCCATAATTTCAGTACAAGAAAT CCATTCGAAGTGAGAAACCTCTCCAAAATGTTTCATTATCTAATCGTGAT TGTAATGATGTATATAAGTCGCCATCCAGTCAGATGTTTAGGTCAAATCT TCAATTTGGTTGAAACTGGGAACACCTTTTCAAATGAATCTTATTACGAG GTGACGTTAAAAAGCGATCGACAATGCCTTGGCTTGTGTAAATATAACCG ATTATGCGTCGCTTATGAAGTGACATCAACCACATCAACGACAGTTGCAA CACAGGGATTCGAATGTCGATTCTTTGACTTCACATATCATTATTACCGC CAAAATGCtgcattttcattggtcaagaAAATTGGTGCTCAATTGTATTC GACCGTCATTGAAGCGAAAACGTGTAAAGATTGGTATCGATATGGGTACA AAAAGAATGGCGTGTATGAAGTTAAGTTGCCTAACGGAAAGCAAAACGTG TATTGCTTCATGGAGGCTGAGGGCGGAGGGTGGATGGCGTTTCAAAGGCG TTTCAATGGATCCGTTCCATTTCAcgataaatttttcagcaagtATGAGA ATGGCTTTGGAGTATCTAACGGTGGAGAATATTGGTTAGGCCTTAAAAAT TTACACCTTTTGACCACATCAAAATCGCATGATCTTTTTGTCATCGTCGA AGCCTTCTCCGGCAAAACTCAAGTCAAACGATTCGCTAGTTTCACCATCG GTACACCGGCTTCAAAATACGTATTTAACTATGAGAAAGTATTACCGCGA TACAGTGAATTCGATTTATTTAAACGTGATAAAGGGCAGAAGTTCAGCTC CATTGATCAAGATAACGACGCGATGACTGGTGGAAATTGCGCCAACCAAT ATCCTGGTGGATGGTGGTTCAGTAATTGTCACCACGACTTTATGAATGGG CAATATTTTCCGACTGGAGTTAGTGGTTACGGCAATGGACTACATTGGTA CAAGTTTCAAGATAGTCAAGATTACAGATCGCTAAAGAAAACACTTCTTC TTATAAGAGAGAATTAAAAACGTTGAAATTTTATGATTGAATTTCTAACC TTGGATATTCTGACTTTTGTTGTTTCCTCGAAAGATGGACCGTTAGATTG AATTTTTTGGGATATAGAGCATTCAGTACCATCAGGGTAACTGCTAACTG CATTACAAACATAAAACAATGAATTCAAATAATTGTAGGAATTATGGCTA GAATTGAAACATAGATTGTAAGAGACCAGTTTTTGGGTATACCTTCCTTA TTTTAAAACTCGCTGCAAACATTACACATACTGGATTGCCATACATAAAG ACATACATTTAAACTGCACCGTTCAGTATTTTGGTACTACATCATTACGT AATGCTAAAGCCGATTTAtacatattcatgatattcatgacgtaatgttt tctacggaaagaccccggtttttgccacttttatctagtttaaatttgcc actactggctaaaaccggggtatttccgtagaaaatattacggcatgaat atcatgaatatgaagCTGTTTACTGGTCTTGCAAAAGATAtgcaaaatgc aattttagaaaaaaacattgtCTTGTCCAATAGAACAATCaactattttg ttttgatgattcgttctaaaaatttcgtttttactttttttaaactacAA TGGTTTTGCAAGCTCAGCATATTTTCATAGTGAT

Coding sequence (CDS) from alignment at sc0000072_pilon:678807..680790+

>MSTRG.10408.1.p1 ID=MSTRG.10408.1.p1|Name=MSTRG.10408.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=990bp|location=Sequence derived from alignment at sc0000072_pilon:678807..680790+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTCATTATCTAATCGTGATTGTAATGATGTATATAAGTCGCCATCC
AGTCAGATGTTTAGGTCAAATCTTCAATTTGGTTGAAACTGGGAACACCT
TTTCAAATGAATCTTATTACGAGGTGACGTTAAAAAGCGATCGACAATGC
CTTGGCTTGTGTAAATATAACCGATTATGCGTCGCTTATGAAGTGACATC
AACCACATCAACGACAGTTGCAACACAGGGATTCGAATGTCGATTCTTTG
ACTTCACATATCATTATTACCGCCAAAATGCtgcattttcattggtcaag
aAAATTGGTGCTCAATTGTATTCGACCGTCATTGAAGCGAAAACGTGTAA
AGATTGGTATCGATATGGGTACAAAAAGAATGGCGTGTATGAAGTTAAGT
TGCCTAACGGAAAGCAAAACGTGTATTGCTTCATGGAGGCTGAGGGCGGA
GGGTGGATGGCGTTTCAAAGGCGTTTCAATGGATCCGTTCCATTTCAcga
taaatttttcagcaagtATGAGAATGGCTTTGGAGTATCTAACGGTGGAG
AATATTGGTTAGGCCTTAAAAATTTACACCTTTTGACCACATCAAAATCG
CATGATCTTTTTGTCATCGTCGAAGCCTTCTCCGGCAAAACTCAAGTCAA
ACGATTCGCTAGTTTCACCATCGGTACACCGGCTTCAAAATACGTATTTA
ACTATGAGAAAGTATTACCGCGATACAGTGAATTCGATTTATTTAAACGT
GATAAAGGGCAGAAGTTCAGCTCCATTGATCAAGATAACGACGCGATGAC
TGGTGGAAATTGCGCCAACCAATATCCTGGTGGATGGTGGTTCAGTAATT
GTCACCACGACTTTATGAATGGGCAATATTTTCCGACTGGAGTTAGTGGT
TACGGCAATGGACTACATTGGTACAAGTTTCAAGATAGTCAAGATTACAG
ATCGCTAAAGAAAACACTTCTTCTTATAAGAGAGAATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10408MSTRG.10408Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10408.1.p1.exon1MSTRG.10408.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10408.1.p1MSTRG.10408.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000072_pilongenomesc0000072_pilon:678807..680790 +