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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000072_pilon:658201..667893+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10404.8.p3 ID=MSTRG.10404.8.p3|Name=MSTRG.10404.8.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=9693bp|location=Sequence derived from alignment at sc0000072_pilon:658201..667893+ (Clytia hemisphaerica_ch_hm2_pilon)
ctttttttcgcacctaaagacaatataaaaaagtttaaaaaaagaattgg
atcgagtttagggtggtaaattaaataataaggTGGCACGCGCCTGGTCG
CACGGCTACGGTCAAAATAGGTGTATAAAATTAATATAAAAGTCAGTCTT
ATCAATGATTTATAATTTCAGCTTTCAGGAGAccaatcaaaaacaaagca
gTGTTGAGAAAGAAGACTTTACTACGCGGATGGACATTAACAATGCATAT
CAAACCAAACGGTACAATCCCTGGATGGTCTAACATCTTACATGCTACTA
TTGGCCAGAACGGCAAAAGATATGGCGATCGTACCCCAGGTGTCTGGTTC
ATCTCAAAAACCAATAAACTTCACATCTGTTCTGCAGTCAATGGACAAAG
CAACCATTGCTTCAACAGCAAACCTTTACCAaaaaacaaatacaacaaag
tGATCATTCGGCAAGTACAAAAGAAAGTACCAAACAATTTCCTTAAATAT
TTCTACGAAATATTCATTAATGGCAAGAGAGTTAAAAGTATTATCAACAA
TAAGCCAAAAGTCTTCAAGAATGTCACCTACTACATCAGTGATCCATGGT
ATAACCCAGCCAAAGCCATCCTGAGAAGCTTGGATCTGAAAATGCACAAA
CACAAAGGTTTGGTATAttcttttgttcaaaatttaacCAGCTTTCAAAC
TCACAAAACTTTACAATAACCCTAAGTCTCCATAGACAGATAGATAGAGT
CTAGATATTCTAAAaatggatagcccagtaatctaggactgtTAAGTAAG
ATTATAGTACAATGATAATAAATTAAGAAATTACAGTTTATTTTGACCTT
ATTTCTTAATCCTTTAGAATCGTACGCGGTTAGAAAGAAGCGCGTTATCA
TGCgaagaaagaaattattgaGAGGGTGGACTTTGTCAATGAGCATTAAA
CCAACTGGTACAGTCAGTGGAtggtcaaacattttccacgCCACAATCGG
GCAGAATGTCAAGCGTTATGGCGACAGAGTCCCTGGCATCTGGTTCAAAT
CAAAGACAAACCAGCTCCATATCTGTTCAGCAGTCAGCGGAAAAGTTAAC
CACTGTTTTGACAGCAAAGCTTTACCAAAGAACAAATTCACACAATTGAT
GGTTCGGCAAATACAAAAGGATAACAATAAATATTATTACCAAATTTTCA
TCAACAACAAAAGAGTTCATAGTGTTGTGAACACAAAACCACAAGTTTTC
AAGAATGTCATATTTTACGCAGCTGATCCTTGGTACAACCCCGCAAAAGC
TCAACTCCGAAAAGTTAATTTCGTCATGCACAAACATCACAGTAAGTTTT
GTAATatttcttttgaagaaaaaaaaaacaaatacctCTAATCTTAACTT
TTATTCTCAGTTATTTTTcgaatacacgtcttttttatataagaacaaac
tatataagaacataaggcttcgatgaccaaaatatccATAACAGGTTAAG
AATATTGGAAGGTTTTTCAAGGTCTAAAacaatcaatttcattttaggaa
aatggataacAATCCTcccaaaatagtgaaaataagggtcttttaggctt
aaaaatcaaaggATTAGatcatccgaaggcttcaaaattaaaaaaaattc
ttataaaagcaaacgTGTATCAAGAACTCTAAATCCGAAACGAGTTtcta
aattgaattttttatttcctcAACTGCAGATCACCGAGGtatcaagaaaa
acactttaTTGAGGACAGAGAAAAATTTAAAGAGAGGATGGACACTGAGC
TTCGGACTCAAACCAACCGGAGTTAGCAATGGATGGGCTAATATCTTGCA
TGCAACAATTGGTAAAAACCTTGGACGCCACGGAGACCGAGTTCCAGGAG
TTTGGTTCAGATCAAAAACCAACAAACTTCACATCTGTTCAACCATCAAT
TCAAATAAAAACCATTGTTACGACAGCGGTAATTTGCCAAGACACAAATA
CTCCAGAATTATCATCCGACAGGTACAATTGAAAAGACCAAACAacttct
tgaaatatttctatcaaattttcatcaatggtaaaaaagtgaaagaagtT
TTGAACAAGAAGCCGAAGATTTTCAAACAGGTCAAATATTATGGCAGTAA
TCCTTTCGGACAAGCTGCAAAGGGAATACTAAGAAATGTCAAATTAGTCC
AACACAAACACCAAGGTGAGAATCTTCTTTATGTAGCTAATTTGATTTTG
TGCGAATACAGTTgactttcgctaattcgaacttctattataggaatctt
tctataattcaaactcgttctcagtccccgtcaagggaAAACCCTTGTAA
ATCACTTTCTAGAATTCGATGGTTTGAGACCGCTTACGCCTTtaaccact
tggccatcgctacatcacttcttgttttatttttaaaactttgaaggTAC
GTACGATTTCGAGGTACACACAAAATAATATTTCTGATCTGTATACATTC
CTAACGGCAAGTAGACTCTTCATTGTTGTTTTGGGTGAAAACGAATTTAG
GTGGAAGTGTTATAAAACATAAGACAAGTAAGATTATACTACAATGATAA
TAAATTAAGAAATTACAGTTTATTTTGACCTTATTTCTTAATCCTTTAGA
ATCGTACGCGGTTAGAAAGAAGCGCGTTATCATGCgaagaaagaaattat
tgaGAGGGTGGACTTTGTCAATGAGCATTAAACCAACTGGTACAGTTAGT
GGGTGGTCAAATATTTTCCACGCCACAATCGGGCAGAATGTCAGGCGTTA
TGGCGACAGAGTCCCTGGTATCTGGTTCAAATCAAAGACAAACCAGCTCC
ATATCTGTTCAGCAGTCAGCGGAAAAGTTAACCACTGTTTTGACAGCAAA
GCTTTACCAAAGAACAAATTCACACAATTGATGGTTCgacaaatacaaaa
ggataACAATAAATATTATTACCAAATTTTCATCAACAACAAAAGAGTTC
ATAGTGTTGTGAAcacaaaaccaaaagttttcaagaatGTCATATTTTAC
GCAGCTGATCCTTGGTACAACCCCGCAAAAGCTCAACTCCGAAAAGTCAA
TTTCGTCATGCACAAACATCACAGTAAGTTTTGTAATatttcttttgaag
aaaaaaaacaaatacctCTAATCTTAACTTTTATTCTCAGTTATTTTTcg
aatacacgtcttttttaaataagaacaaactatataagagcataaggctt
cgatgaccaaaataccCATAACAGGTTGAGAACATTGCAAGGTTTTTCAA
CGTCTAAAACAATCGATTTAATTTTAGGAAAGTGGATaacaattttcaca
aaatactagaacatcctaaggcttcaaaattttaaaaagttcttataaaa
gcaaacaTGTATCAAGAACTCTAAATCCGAATCGAGTTTCTggaatcatt
tttttatttacttaactGCAGGTCACCAAGCtatcaagaaaaacacttta
TTGAGAACCGAGAAAAATTTAAAGAGAGGATGGACACTGAGTTTCGGACT
CAAACCAACCGGAGTTAGCAATGGATGGGCTAACATCTTGCATGCAACAA
TTGGTAAAAACCTTGGACGCCACGGAGACAGAGTTCCAGGAGTTTGGTTC
AGATCAAAAACCAACAAACTTCACATCTGTTCAACCATCAATTCAAATAA
AAACCATTGTTACGATAGCGTTAATTTGCCAAGACACAAATACTCCAGAA
TTATCATCCGACAGGTACAATTGAAAAGACCAAACAacttcttgaaatat
ttctatcaaattttcatcaatggtaaaaaagtgaaagaagtTTTGAACAA
GAAGCCGAAGATTTTCAAACAGGTCAAATATTATGGCAGTAATCCTTTCG
GACAAGCTGCAAAGGGAATACTAAGAAATGTCAAATTAGTCCAACACAAA
CACCAAGGTGAGAATCTTCTTTATGTAGCTAATTTGATTTTGTGCGAATA
CAGTTGACTTTCGCtgattcgaacttctattataggaatctttctataat
tcaaactcgttctcagtccccgtcaagggaAAACCCTTGTAAATCACTTT
CTAgaatttgatggtttgagaccgCTTACGCCTTtaaccacttggccatc
gctacatcacttcttgttttatttttaaaactttgaaggTACGTACGATT
TCGAGGTACacacaaaaataatatttttgtgtaGTGATCTGTATACATTC
TTGACAGCTAGTAGACTCTTGATTGTTGTTTTGGGTGAAAACGAATTTAG
GTGGAAGTGTTAAAAAACATAAGACAAGTAAGATTATAGTACAATGATAA
TAAATTAAGAAATTACAGTTTATTTTGACCTTATTTCTTAATCCTTTAGA
ATCGTACGCGGTTAGAAAGAAGCGCGTTATCATGCgaagaaagaaattat
tgaGAGGGTGGACTTTGTCAATGAGCATTAAACCAACTGGTACAGTTAGT
GGGtggtcaaacattttccacgCCACAATCGGGCAGAATGTCAAGCGTTA
TGGCGACAGAGTCCCTGGCATCTGGTTCAGATCAAAGACAAACCAGCTCC
ATATATGTTCAGCAGTCAGCGGAAAAGTTAACCACTGTTTTGACAGCAAA
CCTTTACCAAAGAACAAATTCACACAATTGATGGTTCgacaaatacaaaa
ggataACAATAAATATTATTACCAAATTTTCATCAACGACAAAAAAGTTC
ATAGTGTTGTGAACACAAAACCACAAGTTTTTAAGAATGTCATATTTTAC
GCAGCTGATCCTTGGTACAACCCCGCAAAAGCTCAACTCCAAAAAGTCAA
TTTCGTCATGCACAAACATCACAGTAAGTTTTGTAATatttcttttgaag
aaaaaaaaaaaaaaacctctaATCTTAACTTTTATTCTCAGTTATTTTTc
gaatacacgtcttttttatataagaacaaactatataagaacataaggct
tcgatcgCCAAAATATCAAtaacaggttaagaacattgcAAGGTTTTTCA
ACGTCTAAAACAATCGAtttcattttatgaaaatgGATAACAAttctcac
aaaatagtgaaaataagggttgtttaggcttaaaactcaaaaaattagaa
cattcgaaggcttcaaaatttcaaaaggttCTTATCAAAGCAAACGTGTA
TCAACTCTAAATCCGATTCGAGTTTCTagaatgaattttttatttactta
actGCAGGTCACCGAGCtatcaagaaaaacactttaTTGAGGACAGAGAA
AACTTTAAAGAGAGGATGGACACTGAGCTTCGGACTCAAACCAACCGGAG
TTAGCAATGGATGGGCTAACATCTTGCATGCAACAATTGGTAAAAACCTT
GGACGCCACGGAGACCGAGTTCCAGGAGTTTGGTTCAGATCAAAAACCAA
CAAACTTCACATCTGTTCAACCATCAATTCAAATAAAAACCATTGTTACG
ATAGCGTTAATTTGCCAAGACACAAATACTCCAGAATTATCATCCGACAG
GTACAATTGAAAAGACCAAACAACTTCTTGGaatatttctatcaaatttt
catcaatggtaaaaaagtaaaagaagttttgaacaagaagccaagaattt
tcaaacagGTCAAATATTATGGCAGTAATCCTTTCGGACAAGCTGCAAAG
GGAATACTAAGAAATGTCAAATTGGTCCAACACAAACACCAAGGTGAGAA
TCTTCTTTATGTAGCTATCTTGATTTTGTGCGAATACAGTAGACTCTCAC
taaattcgaacttctattataggaatctttctataattcgaactcatTCT
CAGTCCCCATCAAGGGAAAACCCTCGTAAATcactttccataattcgaat
ctttgtctaattcgaacaaattagaatCTCCCATTTCGAGTTCAATTTAG
CAACAGTTACCTGTAACACAATTTCCATAATTTTTGCGAGAAGTAAATTT
TACGAGAGTTTTGCGAGCTTTGCTGAAATTTAAGGAACATTTCCATAACA
GTTATTTTATGACGACTCAGACTTAGATATTACCTTATCTCCCAAAACCG
TTGAGCTCCTTTAATTCAGCTTACAAATTAGGCAGATATTTATCCTATAT
AATAAATAATCATCTTTTCTTCCCCAGAATCGTACCAACTTAAACGAAAC
AAACTGATCtccaaaagaaagaaattattgaGAGGGTGGACTTTGTCAAT
GAGCATTAAACCAACTGGTACAGTCAGTGGGtggtcaaacattttccacg
CCACAATCGGGCAGAATGTCAGGCGTTATGGCGACAGAGTCCCTGGCATC
TGGTTCAGATCAAAGACAAACCAGCTCCATATCTGTTCAGCAGTCAGCGG
AAAAGTTAACCACTGTTTTGACAGCAAAGCTTTACCAAAGAACAAATTCA
CACAATTGATGGTTCgacaaatacaaaaggataacaataaatattattac
caaattttcatcaacaacaaaagagctcatagtGTTGTGAACACAAAACC
ACAAGTTTTCAACAACGTCGCGTTTTACGCAGCTGACACTTGGTACAAAC
CTGCTAAAGCTCAACTTCGAAAAGTCAATTTCGTCATGCACATACATCGC
AGTAAGTTGTCTTGCCCattacacatttttataagaacaaactgtataag
aacatcaggcttcattgtccaaaatattaagaacaaattaagaataaggT
ATTAtgaaaacacccaatttcttaggaaattgcacaacaATACTAACAGA
ATAGTaaaattgagaacattttaagattaTTTCTTGACTTAAGTCAAAAG
CTAAGAAAAaccgaaggctttaaaatttttggatattcttacaAAAAGCG
TATAGTTTACATAGTGTCTTTAAAATTATGAGCAGTTTCATGACCAAAAA
TGGCCTaaaaatctaagctagtttgattcagtcactaggataaatctgat
ggtaagttgtgccTGAATAactattccaaggcaaacttaaaatccgtaaa
tataaaaaacctttctttaaagcgccgaaaacgctatattgccattagcc
tgtttcctagccttgtgaatacgggcttagttaactaggctagacCAAAA
ACTACGAGCCGTGGATAATACAGTTGTCGTCCCCTAATTCGaagttctac
tattcgatacgctcctttATTCGATAACATTAcagagtttatgtatgtgt
gtttttcagcgacggagacggtaagatTCTAATTTGattagatcatgacc
aactgaggacaacagtaaatcagcactttaCCGTCCTCGGTTTTGCGGGG
CAGAACTGCGGGttgttccaaatcgcttcagtcactttaccgtcctcaaa
agcacaaatacataaactcgctattgaaaCCCACTGTCAGCAAGAAACTG
TCATAAACAACGCTCTTCTAATTAACACGCTTATTCGATAACAGCGATGA
TAGCGTTACTTCCAGGCTATATACTTttagatcctcagatcctaaggtcc
taagtctagcgttttaactcagagttaaaactctacccgtccaacgtaat
ttagagcgcttccaaatcgtttgttgTTATaggatttcgtgggaatttcc
cttttttctcaaatattatgactttgattgtacaGTTCATCAAGCGATAT
CTtaattacaatttcttttcaaaatttagttctAACTGGAAAACGTGAAA
TAGCCAGCGATGAAAAAGCTTTAGAAGATGTCACAGAAACAGCCGAAGAT
GTCACAGAAACAGCCGAAGATGTTGCCGAAAACGTCAAAGAAGTCACAGA
AACAGCCAATGATGTCACTGAAACAGCCGAAGATGTTGCCGAAAACGTCG
AAGATATTGCCGAAAACGTCGAAGATGTCACAGAAACAGCCGAAGATATT
GCCGAAAACGTCGAAGATATTGCCGAAAACgtcgaagaagaagaagaaga
agagtcCAAAGTTGTTGAAGATGAGGTAGAAAATGTTGAATCTGACATGG
AGGAACAAGACAAAGAGGAGGATATCGTTGAAGATGTCaaagaagatgtc
gaagaaaatgacgaaaatgtcgaagaaaatgatgaggatgtcgaagaaaa
tgatgaggatgtcgaagaaaatgaCGACAATGTTGAAGAAAATGACGACA
ATGTCGAAGAAAATGATGAGGTTGTCGAAGTTCCAGAATGGTCTGACCAG
GAAGAGATGAAAGACGTTGTTGAAAAAATGGAAGATAGTGTAGAGATGGA
AGGAGAAGAAGACCATGATGAATCTTCTTCTGATAACGTGCAAAATTAAG
CATTATCAGAAGATTAAGGTAAGATTATTAATGACACAttgctacacgct
tttttttataagaatacactttataagaatgtccatgatgaaaatggcca
aaaaattaagaatatggtaagaatatcaccatcatggagtttagcaactg
aacctaagaataccatttttaatgcattttaacctgtagattgccaattt
cgatcttaacctaagaataccgtaagaatatttttggatgattttcgcca
aaaagttaagaatatctatgatgaaatgaaaaaacaccattcttataaaa
aaaaacgtttatttaCATTGGATacttttaacatatttttcttcTCCCTT
TACCGTAACAGTAAGTTGGTCTAACGTCGATATTCCTcatctaatgtcga
catccctcatctaatgtcgacattcttcatctaattccgacacccttttc
aGAGATGGGGGGAATAGGAAGATTAGAATTCTGACaactaagcaaagaaa
taaagtttcaaTCAGGTATTTCGACCTtcctatcatttccagctctaAAG
CTGAGTGTCGGAATTAGaaaagggatgtcgacattagaccaacgtaTCAA
CATCTTTTCAACGGGTAATGTAAAAATGAAAGCTATGGGGGTATCGAACC
TATCCAAATTTTCTATTGCACCCTTTCATTGAGAACCGAaggtatttaaa
aataaatatatctcgaattttgaaaacaacGCCGCCCTCTTTAAAAAGCG
TACTTTCTAAAAACCTAAAACcgtgaaaatttcaagattaGAAGAGATAA
GGTAAAATGAATTCTATTAACATGAAGTATATTTTGATAACCTATCATTA
ACTCAAAACATTCCTGCAAAGTCAGTGCTAAATCTCGAAAGAAGTTTGCG
GATAATAGTTTCGATTAATAAGAAAATTATCAATTCTTATTGCTTTTAGA
ATCTACCACTAGACAAATGATGACACAATCAAAATGGACATGTCTGGAAA
ATCATGAAagctaaaaaaattatattttttctaaaattattctaatttag
ctatatcttttttagattttaagatttcatgatgaaactaaattttgttt
acattcatCATGTTGAAGTCTTTCGGATAGACTAAAGGTGCAGGTtgaat
aaaattatttaaagagctatatcaaaaaactattaaatatttttctagac
TGTAATTCTTATCTAGAATATCAAGGTGTAGGAAATACGTTATTATTTTT
AAGATAAAAGGGTTGATGaataaataaagatatatgaCAAAGAATTCGTA
CTATGTGACTTTATTAGTCCTcatgcaaaatttaaaaacatgt Coding sequence (CDS) from alignment at sc0000072_pilon:658201..667893+ >MSTRG.10404.8.p3 ID=MSTRG.10404.8.p3|Name=MSTRG.10404.8.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=477bp|location=Sequence derived from alignment at sc0000072_pilon:658201..667893+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATATCAAACCAAACGGTACAATCCCTGGATGGTCTAACATCTTACA
TGCTACTATTGGCCAGAACGGCAAAAGATATGGCGATCGTACCCCAGGTG
TCTGGTTCATCTCAAAAACCAATAAACTTCACATCTGTTCTGCAGTCAAT
GGACAAAGCAACCATTGCTTCAACAGCAAACCTTTACCAaaaaacaaata
caacaaagtGATCATTCGGCAAGTACAAAAGAAAGTACCAAACAATTTCC
TTAAATATTTCTACGAAATATTCATTAATGGCAAGAGAGTTAAAAGTATT
ATCAACAATAAGCCAAAAGTCTTCAAGAATGTCACCTACTACATCAGTGA
TCCATGGTATAACCCAGCCAAAGCCATCCTGAGAAGCTTGGATCTGAAAA
TGCACAAACACAAAGGTTTGGTATAttcttttgttcaaaatttaacCAGC
TTTCAAACTCACAAAACTTTACAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000072_pilon | genome | sc0000072_pilon:658201..667893 + |
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