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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000072_pilon:557875..560584+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10396.1.p1 ID=MSTRG.10396.1.p1|Name=MSTRG.10396.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2710bp|location=Sequence derived from alignment at sc0000072_pilon:557875..560584+ (Clytia hemisphaerica_ch_hm2_pilon)
ttgaaaacaacttgcttgagttaaggagacattcgagttacagAGGTTCG
ATTTAAAGAGACTTGGCTGCATTTTCGTTATCTATGTCTGTAATATTTGT
TCTAATATcttagaatttttcaaaataatacacatcacatttcaaaatga
agacTTGGTGTTTGTTTGCGATCACTTTGGTTATGACTTTCATAGAGAGT
AATGCTATCTTCCTGACGCACAATGTTCCTGATGTTTATGCAAGAGCTAA
GAAAGCAGAAAGGGTAAGATTTTTGTTCAGCACTAATTCTATTTTATTCA
ACTGACtccctaattcgatcttcaCCAAGTGTtcttttcgaattatagaa
agattcggattACGGAGAGTTATCTTTTAGACGGCTTTCCTGTTGAGGGA
atcaatgttttagttcgaattaccaaagttcgaattatagagagtttgTT
ATATACACTATCAACCCTAGACTGGTAACGAAAATACGAAAATTCTTCTC
GATGAAGGTATCGAAAACACAAGTGAAGGAGTTGTTGAAATATTGTAAAT
GCATTACCAGTCCCTTCAAAAAACCGACCACGACGTAAATGGTTGATAGG
CGTATTTAACACTTTTCTTATTGATGAATTAAGATTTTACCTGCAATCTC
GTCCCAGAGCAACTCCAACTCCTCCTGTGATTTTACTAGATGCGGTAGAA
CCTTTCATAAGAGCTATAAGAATCATAAAAAACGAACTAAGGGATTGGGT
ACAAGTTTGCGTTATTCATAACAACCAAGTGTCGTAGACCCCTTACCCTT
TCTCAATTCGAAATCAACCAAAATTGTTCCAAATTCCTTTGAAAAACTGC
ACTGCAGTTCTACCATACTGGCAAGAacaaataccttattacacgaatat
tactaggcaagtattcaacggccttaaaattaacacgcaaaaaattaaca
cgcaaaaaattaacacgaatcttatttgctttttcaaggacactaTACGG
CTGGCTTTAACTGAGGGTTTTTATCAACACGAAGTTTTTTAATTCGTGTT
TATAAAATGAGTAGTAATactcgtgtaataaggtataatTACACTGTATA
TCTCCACCCACCACCCGTCATTGcccccccTTTGGCACTTTGCTCCTTCa
ttccatccccactgaggaaacaCACCGGGTCATTGAGACAGAGGTGTAAT
TTGCACCTTCATTATACGTAAGGAGCTTTGCTTTCCAGTTAACAGAGtaa
atatcaaaacattgtTAAAGTTACAGCCCTGTGTCACTAACCTGGTGGGG
CCCCAGCCCACtataaatttgatcaaaatttattcccggtgtttggaaaa
ataccctaatttccaccccactggaaaattgacttggATTTCTTGCCAAT
TCGATATCCGATGTAAAAAATTGCAGACCGAAATCATCGCACTGGATTTT
TTGAGCTAGGATTTTATCCCCTTTGTGAGATAGAATTCCACcgagctgtg
agacaggggtgtaatttaTTTAATTCATCTTCGTTGAAGTAACATTTTGG
CTCTAACCATTCTCTAGCGCAAAGGAGGATGGGATTGCAAGTCGTACAAA
CAAATACATTTGTATTGTACAGATTTGTCAGTATTTTTAGATTCCCCATG
GTGTGCTATTTGAATTCATACTACAATATAATATCGTTTTTATAATATCA
GTCTCGATTGACCACATTTATAATCGAATAGAACAGCGTCTTTTAGAATG
AACTCTTTTTGGAAATGTTAATGTCTATAAAATAttagaatgaaaaatta
atacATTTTAGTGACTTTTAAATTCACATCTTAAAACTTTTATcatatta
aaatgaaaaattaagataCATTTTAATGACATTTAAATTCACATCTTAAA
ACTTTTATcatattaaaatgaaaaataaatatattttagtgacttttaaa
ttcaaatcttAAAACTTTTAGCTAAAGTTCACCTGCTGTAAAATCCGCCT
CTAGGCAGGTGCTTTGTCTAGCCAATCCAAAAAATAACCTTTGAACTTAT
GAGGAGAAACAAGAAACAGataaagtatttaaaaaaaacgttaatataaa
atttgaatacaAGTCTACTCTTTTATTTCAGAATTttaaccgcaaaattt
aaccgcaaatttcttttttcgcaTGTAAAGAAATTAAGTTTAGTTGAAAG
AATGCAAATTtaattttcgaatctttctaaaatTTGGACTTGTTTCCAAT
ACCAATCATAAAGAAACCattgtaaaatactttctacAATTTGAATCTCT
CTATAATTTGATCAGATAAGATTCCCCTTTCCTAGTCCGAATTAGCAAGA
GCCAACTGTATGGCCTACGATTCCAACTaaatgttcttttcttcttcatt
ttccagTCGGACATAATCATCCTATGCAGCAAAAATCCTTCACTATGCAA
TCGTTTGAGGTCAATGGGTATGAAACACCACAAACGAAGCACAATGGACA
AATCAAACGATTTTTTACAAAACGATTTTGACTTTGAAGAATACCATGAG
GAGAACAACAGACGAACGAATGATGACAAAGCATCAAAACGAACAATCAA
GAAGTACTACCTAGTTGAAGAAGGCAAATAATGAATAAGAAATTGACATT
ATCTTTTTGGGTTATTTAAAAAGTATGATGGCTTTTTCGACAGTTCTGTA
AAatacttta Coding sequence (CDS) from alignment at sc0000072_pilon:557875..560584+ >MSTRG.10396.1.p1 ID=MSTRG.10396.1.p1|Name=MSTRG.10396.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=684bp|location=Sequence derived from alignment at sc0000072_pilon:557875..560584+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaagacTTGGTGTTTGTTTGCGATCACTTTGGTTATGACTTTCATAGA
GAGTAATGCTATCTTCCTGACGCACAATGTTCCTGATGTTTATGCAAGAG
CTAAGAAAGCAGAAAGGTCGGACATAATCATCCTATGCAGCAAAAATCCT
TCACTATGCAATCGTTTGAGGTCAATGGGTATGAAACACCACAAACGAAG
CACAATGGACAAATCAAACGATTTTTTACAAAACGATTTTGACTTTGAAG
AATACCATGAGGAGAACAACAGACGAACGAATGATGACAAAGCATCAAAA
CGAACAATCAAGAAGTACTACCTAGTTGAAGAAGGCAAATAAatgaagac
TTGGTGTTTGTTTGCGATCACTTTGGTTATGACTTTCATAGAGAGTAATG
CTATCTTCCTGACGCACAATGTTCCTGATGTTTATGCAAGAGCTAAGAAA
GCAGAAAGGTCGGACATAATCATCCTATGCAGCAAAAATCCTTCACTATG
CAATCGTTTGAGGTCAATGGGTATGAAACACCACAAACGAAGCACAATGG
ACAAATCAAACGATTTTTTACAAAACGATTTTGACTTTGAAGAATACCAT
GAGGAGAACAACAGACGAACGAATGATGACAAAGCATCAAAACGAACAAT
CAAGAAGTACTACCTAGTTGAAGAAGGCAAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000072_pilon | genome | sc0000072_pilon:557875..560584 + |
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