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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000071_pilon:1234168..1239148+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10332.1.p1 ID=MSTRG.10332.1.p1|Name=MSTRG.10332.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4981bp|location=Sequence derived from alignment at sc0000071_pilon:1234168..1239148+ (Clytia hemisphaerica_ch_hm2_pilon)
CTCAAGACAGCCGGCTCCAATGCAAAGATATAATAAGTAGAAGtatgaat
gaaaatgaagaaacaaattgaagaaaactaagtaaagagaacgctgaaaa
tgtcaaaatttttctgTCGATGTGTTTTATCGAGAATCAAAGGAAattaa
aaaggtatttatttctcatttttatataatttttgtttttatataaaaac
ataaatataaacCCTGGAtaaagctatatccaccatcttcgATCGGAGCT
Ttcaaaagtggtaccctaatggaagcatagatttataaagccgaggtagg
aaatcctatctaaatcacgtgacattacaacagaatttcagcgcttgacc
aatcagaagcttcgcgggttttcgaaaacaatagcagcaatattttttgc
gatattcatttttttttcttggaagagcttaaagcactccatctagccct
tcgggctttataaatctatgaatGGAAGCACTACTCGACGTGGGTCAAAT
TATAATCCaatgaaattttcgttttttcacCCACATTGAGAAATGGTTAA
AAACGTAATTGTACAGATCAAATATTAATCAAACGAAACTAATCCCTGAT
AACTGGATAAATCGACCCTGAAATAACCTGTGGGTAGAAAGAACAACATC
ATTGAgagaaaatagtttttgaaagatttaagcacatccccttctcacag
acccaatgGGACCCCaaatattgtccccagtggaaaattatactccaatt
tttgtacccactgaaaataatcaaataaaccaatcctcgctgcaaaatag
tatgctattttccccatccccactgaattttctgacttgaaaataatAGG
AAttaaatccccagtcataaaaataATGCggaaaatatcaatccccatcg
agtttcagtctgttatttttaacagaccccccccccattgGCTaaaaaaa
GTCCTACCGGATCTGTGAAAAGGGAATGTTTTAGCTAGCTTGGAACAAAA
CACATCAATTCTTCATAGAAAATTGAGCGAAAAAATCAATCACATAAATC
CGCAACTTCTTAGGAGGGAGGAGGCGTCTATAATCTTTCACAGTGACCAG
ATGAGcctaaagacaatttttttataagaacgtcaaaaaaagGTCAAACT
TTTAGACGTTCTGGGTTTaaaacctaaagattttctTAAACTAAAAgcgt
tattttttttagcatCAAGTGATTGTGTATTTTGGTCTTACATCCCTAAG
AAATCGtgctttttttaggttttgcaAACGACTAAGATATTTTTGTCTTG
CATACTGTGTTCTTGTATCAGAAAACGCGCATAATTAAGTTCAAAGAAGG
TGGAAAGTTAACTGCAATCATATACGAGAATTGCGGGATAAGAGTAGAAT
ATAAGCTTCCAGCCCCCTTCCCCAGTGGCAATGTTGAAGGACATTGGAAA
AGTCAGTGGGAACAGCGCTTGCACtaaacattgccactgggggaaggggg
gCATTCCATTGTTTTCCagcattttccagtgtttttctcaaacattaaag
TCCATGGTTGTAGTAAATTCAAATCTTAACTTTACAATTTCTtgattagt
ttggttttcatgATGGTAAACGGAAGACTGAAGAACAACGCTTACACAGA
ACTCAACAACAAGTCTTGCCAATGTCCCAAACATGATCAACGTCAAATCA
ACTTGACCATAAATTACTCAGCAACAGAAGAAAGGATTTCATCTTGTCCT
GCTTACGACAATGTGATTACACCACCACCGTCTTATAGAAGTTTGTGTGG
ATGTTTTTTGACAGACGAGCCACCGAGATATCAAGTTGTAACTGGACGAC
AGCTAGTAAGGAACTTTTGGGACCTTAAACATATACCTTTCACCTATGAA
Tgaatttatgatatttttctttaaggtggtagtctaccgagaaatggaaa
atcatcgaaaaaattgtctaattttggtttttgggtgttttgagatcctt
aggtctttctgaacatctcctggaaatttcagagagatatctttattttt
caggtcgcagtgagcatttttgtcctgctgggtgcttgaaaaatcgccct
agcaacggaaaaaatcccgttgctaaggacttattttttcaatctcggcc
gaaacatagcaatgtgatacgccaaaagaaagctctttttacgccctttt
cgagcgtcaaaatattattttccgtggcattacgtcatccttaaaattaa
agatggtagcttcAGTAGTGTAAACATCAAAACAAGCTGAAAAGCAAGCT
GTTagcatgattctgcagatttcttggcaggttttagatcaaaacttaat
ttctttgatggaaatgatttGTTTAAATGAAGAATAGACTCTACAGAAGC
CATAAAGTTGCTGTACATTGGTTATGTTGCTGGATTTCtacgaaaaacat
ttaagttgccgccattttgttttgaggagcATATAGGCGGTGAGAGGCGG
TGTGTGCTTTTTGGTGGctcacataatgttttgtagtggatttaaatgca
actgagatatttccaagcacaacatgatgtaacagagatggaaatgtgca
ttataatgaactggacctaacttctggagacgcacattctcatctgacac
cCGCCACTCATAACAGCCTTCCTTCGGTCAAGAAGCCAGCTCATTGCTCA
TTGTCATCTagtctatgtgaataaaaatatgcacacaaaaagttttcatg
cCTACAGAGAGTAATGCTGGActttcaatgaacattttgacacacttatg
tggctgttttcacccaaatttgatgttatcgcaaGATTACCGCAAACTTT
GCTATGTATACATGActttagcgcaacatgtttttgttgatttttggata
ttttatcaatttttgtgaaatgttttactttaacttttgaaacctGACTG
GTTGGATGAGTatattcagtgaagaaattttttgaaaagagctttccaac
ttaaaataatacccatttttgcagacttttgcctttttctttgattttct
caaaacgcgtttccgggggtttgcattcaccttgtcagaaatatcttagg
attgagagtagctacagacttgaaattttcagggaagtttccttacatga
ttgtgtattgaatgaatggattaaaaagttttaaaattggtttcctgatt
tttaatctcaaaaaagcgtttttttcagtttcttaccccctggaaaaaaa
tttcaattttttttttcactcattccagaccttttctaaatattagtcat
ttaaaaaaaaaactaacttcataggtcaagccgactattcagaaaacctg
acacaagcaaaataaagtattttaccccctggctgattttacccccgtct
ttggttatttttagaatttttttttatttttagaaatgttaatagttgat
atacatttcctgaaaatttcattacgaaatgtaaagaagttcttgagtta
ttgcaaaaaatgtgattttttgacttttgaaatctggcggtagactacca
ccttaaaatTAGGTCTTCTCATTTTCTGTTTCAAGCATTATTGAAGCAAA
CGTTCAATTTGCGTAAGGGAATGGCCTTTACAGATTTGGAAGATTGCTTC
TATAATGGCGGGAAATTTTGTAATTAAGTTAAAGATAGAACAAAAAGTta
aacatccaaaggcttcaaagatttcggatgttcttataaaaaaaaaaaac
gtgtatgttgaAAACATAGAAAGATATCTAAATTTTCGTTGTTAATAACC
TGGGCGTGAACTTGGTATTCTCATTTATAAACGTTCGCCgcttcttatta
ttttttttcttttttgttccaCCCGGTTCTTAGTGTAATCTCATGCTTAG
GGTAATTCGATAGACCTTTTTGAAAGCGTTAATTTGAAATATCTTGTGTT
TAAGTGCTGCAATTGGCTCTGTATGCACCTTAAAACTATGTTTCCATACC
TAATAAATAGCGTTCTAGGTTGTTTGGAAGGTATGTCATATTCCTCGCCC
AATTATGAATGGTGCCAGTCGTGGTGGGTGACAATTTTTACAGAACTCTA
CTACTTATATCAAACAGCTTTCCGTGGCCTATTTAAGAACTAAAGTCTCT
GAAATCTAATGTAATATAGCATCAAccagaaattaaatatttattATATT
GAAATTCTGGATCAACTTCCCTCgtttcatattttgaaatctttgaaaaa
acaaatctttcttaaaatttcaaaaaagtttaataTGCACAGGAAATTAA
TTCAGAATTTCCAATCAGAATTGCTAATACAAATTGTCTCGGTAATAACG
TTTTTAAGTTCAGAAATTAATATTCTTTTCAATACTATTTATTGTTCAGG
ATTATGGTACAGTGACAACTTCAACCATTTTCGAAACACAATTCGTCAGG
ACAAGCCGTAATGCATCGTTGAAGCTGTTGGTTGTTGTATTAATTCTATT
GGCAATCAGTTTCATTGCTCTCTTAGTATCTTTGATATTAGGTTGTTATT
CATGGAGAtgttaaaacaaaaattaaacattATTAGTTTCGTTGTCATTA
TCGTAGTGGGTCGACCGAAATTCgagcaaactggggaggcaagaTACAAG
AATATGAttttataaatcataaaattttgactttAGCTCCCCCTattaaa
tgtaaatattttttgtaaaaattacatGAGTGAAACGAGTACGAAAATCt
ttgggtattttctctctttttggcaaAAGACTGCCAATTCTAAGGTGCAA
AAAATCAAAGGGACGccaaaattagtaatcagagaCGTCTTTTGTGCCCT
TTTTATTTCCACGCCACAACGCCCCCAAAAAAGTCGGCTGGGGAGGGGCA
CTTTTCTCTTGAAAAAGAGTTAGAGTGTACTAGCCAACTTTGACTACAGT
GACATAATTCTAGGTATGTGTATAAGTGCAA Coding sequence (CDS) from alignment at sc0000071_pilon:1234168..1239148+ >MSTRG.10332.1.p1 ID=MSTRG.10332.1.p1|Name=MSTRG.10332.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1368bp|location=Sequence derived from alignment at sc0000071_pilon:1234168..1239148+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGTTTTATCGAGAATCAAAGGAAattaaaaagtttggttttcatgAT
GGTAAACGGAAGACTGAAGAACAACGCTTACACAGAACTCAACAACAAGT
CTTGCCAATGTCCCAAACATGATCAACGTCAAATCAACTTGACCATAAAT
TACTCAGCAACAGAAGAAAGGATTTCATCTTGTCCTGCTTACGACAATGT
GATTACACCACCACCGTCTTATAGAAGTTTGTGTGGATGTTTTTTGACAG
ACGAGCCACCGAGATATCAAGTTGTAACTGGACGACAGCTAGATTATGGT
ACAGTGACAACTTCAACCATTTTCGAAACACAATTCGTCAGGACAAGCCG
TAATGCATCGTTGAAGCTGTTGGTTGTTGTATTAATTCTATTGGCAATCA
GTTTCATTGCTCTCTTAGTATCTTTGATATTAGGTTGTTATTCATGGAGA
tgttaaATGTGTTTTATCGAGAATCAAAGGAAattaaaaagtttggtttt
catgATGGTAAACGGAAGACTGAAGAACAACGCTTACACAGAACTCAACA
ACAAGTCTTGCCAATGTCCCAAACATGATCAACGTCAAATCAACTTGACC
ATAAATTACTCAGCAACAGAAGAAAGGATTTCATCTTGTCCTGCTTACGA
CAATGTGATTACACCACCACCGTCTTATAGAAGTTTGTGTGGATGTTTTT
TGACAGACGAGCCACCGAGATATCAAGTTGTAACTGGACGACAGCTAGAT
TATGGTACAGTGACAACTTCAACCATTTTCGAAACACAATTCGTCAGGAC
AAGCCGTAATGCATCGTTGAAGCTGTTGGTTGTTGTATTAATTCTATTGG
CAATCAGTTTCATTGCTCTCTTAGTATCTTTGATATTAGGTTGTTATTCA
TGGAGAtgttaaATGTGTTTTATCGAGAATCAAAGGAAattaaaaagttt
ggttttcatgATGGTAAACGGAAGACTGAAGAACAACGCTTACACAGAAC
TCAACAACAAGTCTTGCCAATGTCCCAAACATGATCAACGTCAAATCAAC
TTGACCATAAATTACTCAGCAACAGAAGAAAGGATTTCATCTTGTCCTGC
TTACGACAATGTGATTACACCACCACCGTCTTATAGAAGTTTGTGTGGAT
GTTTTTTGACAGACGAGCCACCGAGATATCAAGTTGTAACTGGACGACAG
CTAGATTATGGTACAGTGACAACTTCAACCATTTTCGAAACACAATTCGT
CAGGACAAGCCGTAATGCATCGTTGAAGCTGTTGGTTGTTGTATTAATTC
TATTGGCAATCAGTTTCATTGCTCTCTTAGTATCTTTGATATTAGGTTGT
TATTCATGGAGAtgttaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000071_pilon | genome | sc0000071_pilon:1234168..1239148 + |
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