|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000071_pilon:782834..787944- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10297.5.p1 ID=MSTRG.10297.5.p1|Name=MSTRG.10297.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5111bp|location=Sequence derived from alignment at sc0000071_pilon:782834..787944- (Clytia hemisphaerica_ch_hm2_pilon)
GTAAAGTTCTTCAAACAGAAATCTTCATTTGTTTGTTTCGCTGTTTGTTT
ACAAAAAAAGAAATTCTCAAAATGGGCGTTTCACATTATTAGTACCTACA
TGCACTTCTGTAAGATCTTTTTTTGTACATTTAAATTATTCTAGTTTTTA
ACTTTATAACGATTTTTCATATTTTACAAACGGTACAATATACATAGTTT
AGAAATGAAATCAAATTGTATGATATTCAGTTTTCTTGCTAAATTCAATA
TAAATTTATGAGGTACGTTTCTTTCGTTGGCTTTTTCATGTATGTTTCCT
TGTTTTGATGTTTTTTGAAACCGCATACTTGTCCAATGAGATCGTGAATC
TTTTTTAGTCTGTGAAACAATTTTTTTGATTTCAAGAACAATATTTGTGC
AGCCTGTCTTTTGTTTGACGAACGAAAAAATGATTTTGATCATATTTTCT
ATACCCTCTATTCTTTTCCGTCAGTTTGAAAGAAGCTGTGTGAAATGATG
GGTCATCTTAAAGAGTTGTGGACAGTTCTTAGCTTGGCTGCCATTTTGTT
TTCAGTGCGATCAATCACAACAATGAATTATAAAATTACAAAAGAATGGA
ACGACAAATCGGCCAATCATAATCCAGCATCTATTTCACTGTCATGGCAA
TCAGGGAATGATTACGTCACCGCTATCTTTGAGGCGCCATTTTTCGACGA
CCCTGCAGCGCCAAAGGGAGAAGTTGGGAGACCGTTCCCGAAACTCTGGG
ATTACGAAGGTGATTATTTACTTTAGCAATACGAAGGTTATCCGCTTTTA
ATGACAGATTTTTGGCGTAATAAAGTGCACTTTAAATTCTCTATTTTTGA
TGACGTGAAATCAGCAACTTTCAACAACTCATTCTTGGCTACTTAATTCG
TGAAATCAAAACTACGCGAATTCGCGAAAATTAATCTTGTTTAAGTGTGA
AATTCTGGTTTTATTATTTCTGTCTTTCTCTCACTCGAGATGGGAAAGTG
TGATTTGTGCTGAAACATCTTCTGAAAGATATTTCTGACTTTCTTTTTTT
CTTTTGTTCAGTGGTAGAGATTTTCTTCTTATCTTCAAAAAGTCAAGAAT
ATTTGGAAGTTGAAGTTTCACCGTAAGATTTTCCTTCTTTCATTTGAACC
CTAACTACACTGAGAATAAAGTTTCGGATGTTTAAGAAGATAAAACACTT
TGTCGTGCACCTGTCAAATCTTATGCAAGGTCACTCAAACTTCTTCAGAG
ATTCTTAACCTGTGCAAAACAATTTTTCGCTCAAGCTAGGATGATCTTCT
CTTGTTTAATTGAACACACCCCTGTCTCTGTTGTGGGCTGGGATACAACG
AAGGAGTTGAATACCAATCTATCAAAACATATTTTGCTTGGGTGGAAACT
TTCAATTTAGCTCATAAACCTCATTCAAATATTATGTTTCTTTTACAGAC
ATGGTCAGCATCTTTTGTTGCTCCTCAAAGGCGTCCGCAACATGATCGAG
GTTGGTGGCAATTTGTTCGCATTTCTTTCTATGTAGTAGAAGAGACATAC
GAGACTCCCTTGGATGAAACCTTGATTTCTGAACACGACCTGTTTGTTTA
CTGTTAATTTGATGCAATCGATTTGATTGTGATTATTCCGGTCTTTTCTC
TATTAAACTCTAACAGTTTTCTGTTACATTGTTGGCGAGAGAGCCAGATT
GTACCTACACCCTTCTCAAAATGTTATAATGTTTTCATCTCTGAATAGTC
TTTTATCTCTTGAGAGAATCGCCAAAAGTCGCTACACGTAAAATAATTCT
CGAGTAACCCGTGACACGCTTTTTTTATAAGAATAGTGTACTTTGAATGA
GGATCAAGTATTCTTAAGAAATTGTTAAAATTGAGGGTGAAATATTCTTA
ACGTATTCTTACTTTTTTAGACTTGACTTTTTTACAAACATGAGAACTGA
TCAATTTGAGAGTTTTGGACTTTTGAGTGAACCTTTGGAACTAAGATTAA
ATTTCTGCCTCAAAGTTTAAATTCAAGTCTAACAAAGGAAGCAGTTTTTT
TCTGTTGACCAAATACAAAATGTATTCTTATCAAATTCTGTGAAACTCAC
CCTAGAGGGTATTCTTAGGGTATTCTTACAATTTGGCCAATTTTCACCCT
GATATTCTTATAGAAGATATTCTTATTTTAAAAAAGCGTGTACCTAAGCC
TGGTACTTAAGCCATGCTTAAAGTTGTAAATATTGGATTCACCAAATGGA
TTTTTTGTGGCCAGGTTTCTGGGCTTATTGAAGTCAAAAGAACTACCATG
ATATTTAAATCTTCTTCTCTTAACAGGACGAACTTCCAATGAACTACACA
GCTTCCATCGACCTTAACAACAAAACGTGGAAAGGTCACGCGCACATCCC
GCTCGCATATTTCCCGCGAAGTGTGGACCGAATGAATGCGTACGCCATCC
ACGGTTCGAATGAAAAGCGTGTATACGAAGCGCTCTATCCAACGCCAGAA
GGGAAATTCCCTCAACCTGATTTGTAAGTATTTTTACCTTTGAAACTACA
CCCTTGTTGCGTTTCATCCCATACTCTCACAACACCCCTGTCTCGTGTTA
ATGACTACCATGTTACTTCGAATAAACGCCTCTCCTAAAATCCGAAAAAT
TAATAAACGCCCGGGGTGCTTATTCGAAGTAATACAGTACTTTAATCGTA
GAAATTTTAGCGAGACTAATTTTAGCGTTTTAGCGAGTTTTCCCTATTTT
CGCTAAAATATAAATCTCGCTAAAACGCGCCGAATTGACAGATGGTTAAA
ATTTATCCGCAAGAAATTTTTCGAAAAGCTGATTCGCTAAAATAAATCCA
GTATGTTTTTTCTTTCATTTTTTGGACCTACCCCGGTGGGGTGGAGGTCC
TATAAATTCACCTCTGTCCGTCCGTCCGTCCGTCCGTCCGTCCGTTCGTT
ACCAGCTTTTCTCGAGATTGAATCATAGGAATCATTTGATTTTTGGTACA
AAGGTGCAAAACGGTAGTGGCCAAAATGTGACGAAGCCCGATTTTCGAAA
AAAAATTTTTTTGGGCAAATTTGGGCCAAAAAACGGCTAAAAAACGGGTT
TTTTGGACTTTGTGAAAAAATTGGATCATTAATTTTTTCTGATTTTTTGC
ATGAAAAACGCATGTTTATCTATAAGAATCACTATTAATAAGCATACATC
AATGTTCTTAGTCAAATTACTCAATTTCTTCATGAGATAGATGTTTTTTT
TGCTCATGAGGGCTTACTTTTGAAGAATATGTGTGATTAGACATGAAATT
TTGGTTGCTTGGCGTGTTTTTATAGAAAAACTGGCCAAGTTCAAATTTTT
TTTATAAGCACATTATCAATTACTTAGGTATTAGCTTTTCTCGAGATTGG
CTCTTTCATTCTTTAAGACTTTTTGCACAAAGATGCATAACTATAAACCC
TCGAATGTGACGGAGCCCAATTTTCGAAAAAAAATATGTTTTTGGGCAAA
TTGGGGCCAAAAAACGGCTAAAAAGCGGGTTTTTTGGACTTTGTGAAAAA
TTGGATCATTGATTTTTTCTGATTTTTTGCATGGAAGTAGGGTACCATCA
TAGGTAAAAGATGGCTCAGGGAGATTTTTGCAAAAAAAATTTGTTGGCTC
AAAAAACGCATGTTTATCTATAAGAATCACTATTAATAAGCATACATTAA
CGTTCTTAGTCAAATTACTCAATTTTTTATGAGATAGATGTTTTTTTTGC
TCACGGGGGCTTACTTTTGAAGCATATATGTGTTTAGACATGAAATTTTG
GTTGCTTGGCGTGTTTTTACAGAAAAACTGGCCAAATTCTATATTTTTTT
ATAAGCACATTATCAATTACTTAGGTATTAGCTTTTCTCGAGATTGGCTC
TTTCATTCTTTATGATTTTTTGCACAAAGATGCATAACTATAAACCCTCG
AATGTGACTGAGCCCGATTTTCGAAAAAAAATGTTTTTGGGCAAATTTGG
GACAAAAAACGGCTAAAAAAAGGGTTTTTTGGACAATGTGAAATATTGGA
TCGTTTTTTTTTTTGATTTTTTGCATGATAGTAGGTAAAAGATGGGTTTA
GCAGATTTTTGTAAAAAAACTTTTCAGCTCAAAAAACGCATCTTTATCTA
TAAGAATCACTATTAATAAGCATACATCAATGTTCTTAGCCAAATTACTC
AATTTTTTGATGAGATAGATGTCTTTTTATGCTCACAAAGTCTTGAATAT
GAAAGAATATTTCAAGAGCATGAAATTTCGGTTTCTAAACTTTTTTTTTA
TAAGAAACAAACGACTAATTTTAATAAATCGTCACTATTTGTGTTCTGAA
TGATTGTTTAACGTTCATGCTCACGTAGATATCAATTATATATGTGTTAA
ATGCATAACCAGGTAGGTCCATAAAAGTATCACTTGTTATCATTTTGTTA
TCATTTTCATAATTTTTTCAAAAACTACCTAGTAATGGGGGCGTAAATTT
CCAAGTTTTTCTGTTCTTAGTCAAGAATTGTGTTACAAAGACTATATTGA
TTTTTGAATTAAAAAACATTATTTTTTTCTTCGAAATCATTGCCCTCGCT
AAAATTAATCCACGCGAAATTTTTGTCAGACGAGTATTCGCTAAAATTTA
TCCACGCGAAATTTTTTGAAATCGTGATTCGCTAAAATAAATCCAAAAAA
ATCAAGATTTTCCTGATTCGCTAATATACGCTAAAATTAATCTCGCTAAA
ATTTCTACGATTAAAGTAGTTGATAGGTAGGATACTCAAAATTTCAAATT
TGAACATGAAACCAAGAGTGGTAGTCAACATTAATTTTTTAGCTAATAAC
TTTGTTTTGGCGTTACATTTTACCTATATATAGTGATTTGAGTCATGAAG
AACAGTCAGTAATCCTGACTCCTTTTCTTATTTATCACTTTCAGCCATCG
ATTGGAATATTTCGAAGATTTCGATTTATGGAAGATCGTTACTGATAGCT
CGGTTACTATTGGTAACTACTGGAACCAATTCCCAAAGACGTGAAAAAAG
TTTTTTTTGTACTTCATTATTTTCATATTTGAAAATATATCAGCACGCAT
GCTCGTTCAAA Coding sequence (CDS) from alignment at sc0000071_pilon:782834..787944- >MSTRG.10297.5.p1 ID=MSTRG.10297.5.p1|Name=MSTRG.10297.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3375bp|location=Sequence derived from alignment at sc0000071_pilon:782834..787944- (Clytia hemisphaerica_ch_hm2_pilon)
CCATCGATTGGAATATTTCGAAGATTTCGATTTATGGAAGATCGTTACTG
ATAGCTCGGTTACTATTGGTAACTACTGGAACCAATTCCCAAAGACGTGA
GACGAACTTCCAATGAACTACACAGCTTCCATCGACCTTAACAACAAAAC
GTGGAAAGGTCACGCGCACATCCCGCTCGCATATTTCCCGCGAAGTGTGG
ACCGAATGAATGCGTACGCCATCCACGGTTCGAATGAAAAGCGTGTATAC
GAAGCGCTCTATCCAACGCCAGAAGGGAAATTCCCTCAACCTGATTTACA
TGGTCAGCATCTTTTGTTGCTCCTCAAAGGCGTCCGCAACATGATCGAGT
GGTAGAGATTTTCTTCTTATCTTCAAAAAGTCAAGAATATTTGGAAGTTG
AAGTTTCACCATGATGGGTCATCTTAAAGAGTTGTGGACAGTTCTTAGCT
TGGCTGCCATTTTGTTTTCAGTGCGATCAATCACAACAATGAATTATAAA
ATTACAAAAGAATGGAACGACAAATCGGCCAATCATAATCCAGCATCTAT
TTCACTGTCATGGCAATCAGGGAATGATTACGTCACCGCTATCTTTGAGG
CGCCATTTTTCGACGACCCTGCAGCGCCAAAGGGAGAAGTTGGGAGACCG
TTCCCGAAACTCTGGGATTACGAAGCCATCGATTGGAATATTTCGAAGAT
TTCGATTTATGGAAGATCGTTACTGATAGCTCGGTTACTATTGGTAACTA
CTGGAACCAATTCCCAAAGACGTGAGACGAACTTCCAATGAACTACACAG
CTTCCATCGACCTTAACAACAAAACGTGGAAAGGTCACGCGCACATCCCG
CTCGCATATTTCCCGCGAAGTGTGGACCGAATGAATGCGTACGCCATCCA
CGGTTCGAATGAAAAGCGTGTATACGAAGCGCTCTATCCAACGCCAGAAG
GGAAATTCCCTCAACCTGATTTACATGGTCAGCATCTTTTGTTGCTCCTC
AAAGGCGTCCGCAACATGATCGAGTGGTAGAGATTTTCTTCTTATCTTCA
AAAAGTCAAGAATATTTGGAAGTTGAAGTTTCACCATGATGGGTCATCTT
AAAGAGTTGTGGACAGTTCTTAGCTTGGCTGCCATTTTGTTTTCAGTGCG
ATCAATCACAACAATGAATTATAAAATTACAAAAGAATGGAACGACAAAT
CGGCCAATCATAATCCAGCATCTATTTCACTGTCATGGCAATCAGGGAAT
GATTACGTCACCGCTATCTTTGAGGCGCCATTTTTCGACGACCCTGCAGC
GCCAAAGGGAGAAGTTGGGAGACCGTTCCCGAAACTCTGGGATTACGAAG
CCATCGATTGGAATATTTCGAAGATTTCGATTTATGGAAGATCGTTACTG
ATAGCTCGGTTACTATTGGTAACTACTGGAACCAATTCCCAAAGACGTGA
GACGAACTTCCAATGAACTACACAGCTTCCATCGACCTTAACAACAAAAC
GTGGAAAGGTCACGCGCACATCCCGCTCGCATATTTCCCGCGAAGTGTGG
ACCGAATGAATGCGTACGCCATCCACGGTTCGAATGAAAAGCGTGTATAC
GAAGCGCTCTATCCAACGCCAGAAGGGAAATTCCCTCAACCTGATTTACA
TGGTCAGCATCTTTTGTTGCTCCTCAAAGGCGTCCGCAACATGATCGAGT
GGTAGAGATTTTCTTCTTATCTTCAAAAAGTCAAGAATATTTGGAAGTTG
AAGTTTCACCATGATGGGTCATCTTAAAGAGTTGTGGACAGTTCTTAGCT
TGGCTGCCATTTTGTTTTCAGTGCGATCAATCACAACAATGAATTATAAA
ATTACAAAAGAATGGAACGACAAATCGGCCAATCATAATCCAGCATCTAT
TTCACTGTCATGGCAATCAGGGAATGATTACGTCACCGCTATCTTTGAGG
CGCCATTTTTCGACGACCCTGCAGCGCCAAAGGGAGAAGTTGGGAGACCG
TTCCCGAAACTCTGGGATTACGAAGCCATCGATTGGAATATTTCGAAGAT
TTCGATTTATGGAAGATCGTTACTGATAGCTCGGTTACTATTGGTAACTA
CTGGAACCAATTCCCAAAGACGTGAGACGAACTTCCAATGAACTACACAG
CTTCCATCGACCTTAACAACAAAACGTGGAAAGGTCACGCGCACATCCCG
CTCGCATATTTCCCGCGAAGTGTGGACCGAATGAATGCGTACGCCATCCA
CGGTTCGAATGAAAAGCGTGTATACGAAGCGCTCTATCCAACGCCAGAAG
GGAAATTCCCTCAACCTGATTTACATGGTCAGCATCTTTTGTTGCTCCTC
AAAGGCGTCCGCAACATGATCGAGTGGTAGAGATTTTCTTCTTATCTTCA
AAAAGTCAAGAATATTTGGAAGTTGAAGTTTCACCATGATGGGTCATCTT
AAAGAGTTGTGGACAGTTCTTAGCTTGGCTGCCATTTTGTTTTCAGTGCG
ATCAATCACAACAATGAATTATAAAATTACAAAAGAATGGAACGACAAAT
CGGCCAATCATAATCCAGCATCTATTTCACTGTCATGGCAATCAGGGAAT
GATTACGTCACCGCTATCTTTGAGGCGCCATTTTTCGACGACCCTGCAGC
GCCAAAGGGAGAAGTTGGGAGACCGTTCCCGAAACTCTGGGATTACGAAG
CCATCGATTGGAATATTTCGAAGATTTCGATTTATGGAAGATCGTTACTG
ATAGCTCGGTTACTATTGGTAACTACTGGAACCAATTCCCAAAGACGTGA
GACGAACTTCCAATGAACTACACAGCTTCCATCGACCTTAACAACAAAAC
GTGGAAAGGTCACGCGCACATCCCGCTCGCATATTTCCCGCGAAGTGTGG
ACCGAATGAATGCGTACGCCATCCACGGTTCGAATGAAAAGCGTGTATAC
GAAGCGCTCTATCCAACGCCAGAAGGGAAATTCCCTCAACCTGATTTACA
TGGTCAGCATCTTTTGTTGCTCCTCAAAGGCGTCCGCAACATGATCGAGT
GGTAGAGATTTTCTTCTTATCTTCAAAAAGTCAAGAATATTTGGAAGTTG
AAGTTTCACCATGATGGGTCATCTTAAAGAGTTGTGGACAGTTCTTAGCT
TGGCTGCCATTTTGTTTTCAGTGCGATCAATCACAACAATGAATTATAAA
ATTACAAAAGAATGGAACGACAAATCGGCCAATCATAATCCAGCATCTAT
TTCACTGTCATGGCAATCAGGGAATGATTACGTCACCGCTATCTTTGAGG
CGCCATTTTTCGACGACCCTGCAGCGCCAAAGGGAGAAGTTGGGAGACCG
TTCCCGAAACTCTGGGATTACGAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000071_pilon | genome | sc0000071_pilon:782834..787944 - |
|
