MSTRG.10283.1.p1 (mRNA) -

Overview
NameMSTRG.10283.1.p1
Unique NameMSTRG.10283.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000071_pilon:536385..538321-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10283.1.p1 ID=MSTRG.10283.1.p1|Name=MSTRG.10283.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1937bp|location=Sequence derived from alignment at sc0000071_pilon:536385..538321- (Clytia hemisphaerica_ch_hm2_pilon)
ATTGAGCGATGGTGGAAAGAACTACATGAAAGACTAGAGAAATTCTTCAA AGGTCAACTCCTGTTCTTAAAATGTGGCGGACATTATGATCCAAGTTGTG AACAAGACAGGTAATTTGCTTTACATCAATCTTATTTTCTGCATGCAATA ATTGACCAAAGATGAATATTAAGATCCGATAACGCTCCGCAACGCATACG TCAAGTTATTGAGGTTCAAGTTATTGTTTCATAATGTTCAGTGTTTGATA TAGAAATATCTGTTCGCCTTTTTAGACACCATGTCTGCAAACTGTGGCAA AAACTGTTAAAATTTAAAAGAGTTTTGACTTTTGGTGGTACCATTCAGTA TGCTTTTGTACTTTTAGGATGATTTTAGCCTATATCATGATCCCAATCCT CCAAGCCGAACTTAACACATTCAAAGATGTCATCTGGAATTGCCATCGCA TTAGATATCAAAAAGACCAAGTTCTACCAGACGGTGTTCCCAACCACATT TATACCGTACCTGAGGTGCATGACCTTGTTGAATGTGGTAAGTTCCAGTC AACTTTTTTATTCGATTATTGATGTCTTCAGCTCAGTTTTTGCGAAGATA ATCTGTGGCAAATCTTTTTTACAATACTTAGGTATTTGCTTCCAGGCACA TACGCTAATCGTTGATCTTTACAGCGTAATTTTGATGAACCAGGCATAGT GTCCTTCAGGGTCTCTTCCCCATGCCTAGAATGAAAATTTTCCATCCCCC CCCCTCATTTTTCCCCACCCTGCCTCCAAAGATTTTTCTGTCCCCCCCCT CTCAAGCATAAAATTAAAAAGCTGTAATTTGATGAACTTAACGCTTATTG TTTTCCCTAAGTTAGTTCTAATTCAAGAATAAATGGAAAGGATGGTTGTT TTTAAACCATAATATTAATAAAACTAAGCATTATGCTATATCATCTCATA AAACCAGTTGTTTTTCAATTTTGAATTGATTTTGGTGAGTCCCCCCCCCC ATGCCTAGAGTGAAAATTTTCCATTCCCCCCACCCTGGCTTCAAAAAAAA TTCTTTCCCCCCTATACGTCCTTTTGACCTCAAAACCCATTCCCCCCCCT GAATCCAGGGGGGGAGGACACTATGCCAGGTACACGCTTTTTTTATAAGA ATAGTGAACTTTGGATGAGGGTCAAATATTCTTAAGAAATTGCCAAAATT GAGGGTGAAATAATTCTTAACGTATTCTTACTTTTTTAGACTTGACTTTT TTACAAACACGAGAAATGATTTTTTGAGAATTTGGCTTTTTGAAGCTAAC ATTACATTCAGCCTCAAAGTTTAAATTCAAATCTAACAAAGGAAGCAGTT TCTTTCTGATAACCAAATAAAAATGACTACCCAAATTCTGTGTAACTCAC ACTGAGGGTATTCATAGAGTATTCTTACGATTTGGCCAATTTTCACCCTG ATATTCTTATATAAAAAGCGTGTAGCATAAGTTTTTACTAAACCTCGTAA AGAAATTTCACTTTAGTAATGAAACATTTTGTGGCGTCTCCGGTACTTTA GACCCCAAGTTTAAAAAAAAGCAATCTTGGAATTTATAAACTCTTTTATT TATCTCCTCCCCGTGTACTTCTTGACTGACCTTCTTCATTGTAGGCTTTG ATGTATCAGACCAGGATATCCAATCCCTTATAGATGAATCGGGAATCACA CCAGAAGATGCCGACTACCTTGATGATGATTTTAGGCATCTATGTGAACA ATATCTACCAAATCTAGAGCTCGTTAAACCTCATGAATGTCAGGAAGCGT ATATATACTTAAAACGAGAGATTGAAAATGGCAGTTTTTAAGAAACTTAA CAATTAAGTTTTTTTTCTCCATACCGTATTTCCTCTAACTACTTTAATGG GATAAACTTTCGCGGGGATTAAATTTCGCGGATTTCG

Coding sequence (CDS) from alignment at sc0000071_pilon:536385..538321-

>MSTRG.10283.1.p1 ID=MSTRG.10283.1.p1|Name=MSTRG.10283.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1431bp|location=Sequence derived from alignment at sc0000071_pilon:536385..538321- (Clytia hemisphaerica_ch_hm2_pilon)
GCTTTGATGTATCAGACCAGGATATCCAATCCCTTATAGATGAATCGGGA
ATCACACCAGAAGATGCCGACTACCTTGATGATGATTTTAGGCATCTATG
TGAACAATATCTACCAAATCTAGAGCTCGTTAAACCTCATGAATGTCAGG
AAGCGTATATATACTTAAAACGAGAGATTGAAAATGGCAGTTTTTAAGAT
GATTTTAGCCTATATCATGATCCCAATCCTCCAAGCCGAACTTAACACAT
TCAAAGATGTCATCTGGAATTGCCATCGCATTAGATATCAAAAAGACCAA
GTTCTACCAGACGGTGTTCCCAACCACATTTATACCGTACCTGAGGTGCA
TGACCTTGTTGAATGTGATTGAGCGATGGTGGAAAGAACTACATGAAAGA
CTAGAGAAATTCTTCAAAGGTCAACTCCTGTTCTTAAAATGTGGCGGACA
TTATGATCCAAGTTGTGAACAAGACAGGCTTTGATGTATCAGACCAGGAT
ATCCAATCCCTTATAGATGAATCGGGAATCACACCAGAAGATGCCGACTA
CCTTGATGATGATTTTAGGCATCTATGTGAACAATATCTACCAAATCTAG
AGCTCGTTAAACCTCATGAATGTCAGGAAGCGTATATATACTTAAAACGA
GAGATTGAAAATGGCAGTTTTTAAGATGATTTTAGCCTATATCATGATCC
CAATCCTCCAAGCCGAACTTAACACATTCAAAGATGTCATCTGGAATTGC
CATCGCATTAGATATCAAAAAGACCAAGTTCTACCAGACGGTGTTCCCAA
CCACATTTATACCGTACCTGAGGTGCATGACCTTGTTGAATGTGATTGAG
CGATGGTGGAAAGAACTACATGAAAGACTAGAGAAATTCTTCAAAGGTCA
ACTCCTGTTCTTAAAATGTGGCGGACATTATGATCCAAGTTGTGAACAAG
ACAGGCTTTGATGTATCAGACCAGGATATCCAATCCCTTATAGATGAATC
GGGAATCACACCAGAAGATGCCGACTACCTTGATGATGATTTTAGGCATC
TATGTGAACAATATCTACCAAATCTAGAGCTCGTTAAACCTCATGAATGT
CAGGAAGCGTATATATACTTAAAACGAGAGATTGAAAATGGCAGTTTTTA
AGATGATTTTAGCCTATATCATGATCCCAATCCTCCAAGCCGAACTTAAC
ACATTCAAAGATGTCATCTGGAATTGCCATCGCATTAGATATCAAAAAGA
CCAAGTTCTACCAGACGGTGTTCCCAACCACATTTATACCGTACCTGAGG
TGCATGACCTTGTTGAATGTGATTGAGCGATGGTGGAAAGAACTACATGA
AAGACTAGAGAAATTCTTCAAAGGTCAACTCCTGTTCTTAAAATGTGGCG
GACATTATGATCCAAGTTGTGAACAAGACAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10283MSTRG.10283Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10283.1.p1.exon3MSTRG.10283.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10283.1.p1.exon2MSTRG.10283.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10283.1.p1.exon1MSTRG.10283.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10283.1.p1MSTRG.10283.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000071_pilongenomesc0000071_pilon:536385..538321 -