MSTRG.10281.1.p1 (mRNA) -

Overview
NameMSTRG.10281.1.p1
Unique NameMSTRG.10281.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000071_pilon:493949..495461+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10281.1.p1 ID=MSTRG.10281.1.p1|Name=MSTRG.10281.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1513bp|location=Sequence derived from alignment at sc0000071_pilon:493949..495461+ (Clytia hemisphaerica_ch_hm2_pilon)
GCTATCGGTTACAGGTGTAAAACAATGAGAATAGAAAATTATCTGTACAC TTTTTCatttaagaaaaataactcgaacCATGAAGTTTTGATGATATATA GGAAGTAAACTTAATAAGAATCTGATCAAAATTTGGAGATTATTTACAAC AAAGCACACTAGAAGCAAGCTTCATCTGAAAGGTAAGTGCAAAATTTCCT TGTCCTTGTTCAAAAGCCACATAAGAATATTCCGAtaggattcaaaattt taccaCTCAGTAGCGTAAAAAAGATGGATACAAAATTCATAAAGATGACT CTAGCTTACACATATTCCTACAGAAATCATGGTCTCtcttttattttaat gaaaatcttttgaaccCTCTCTGAATCTTAATTCAACAAAATCCTTCCCA CAGATCGCAAAGATGAGTTGCAGTCGCCTCCGTCGTAAAGGTTCGTCCTT ACAACAATCACACAACAACCACAACAATTACAAGATCATTCTGGTCGAAT GGGAAGACTGCGGGCAACAATTCCTCAATGGAATATCATTCGCTTCCAAA CAAGAGAACATACAAGTTCACATTTTCGTTAACCAATCAAAAGAAAGTAC AACAGCCAATCAGAACATACAAAATACTCGTATCGCTCTCAAAAATGTCG CAGTTTTTCACGAGAGTTTGACCGATGGTAAAGATGCATCGTGGACGGAC TTACTCGCTTATTTAATCAATTTTTACGCGCGCACAACTTTTTCGTGTCA TCATTGCGCGGCCATGCATTCGAAGCCGAACTACCAGGTTACTTTAGCAG CACGTGACCAGGGGAAATATAAAGAGTTGAATGCTCTTTTGAAGTCGAAT AAAACGGAAACGAAAGTCGTGGATGGATGGAAGACAACATTACTGGATCT ATTCCCTCACGTGTGCACAGagtgtaaaataatttttaatgaccAAAGAG CGGCCCAGTTACACGACAAAGAAGATCATAACTATCTCTGCGAGAATATG TCGTGTGAACGGAGCCGTAGAGAGAATGGATTTTACAGCCACAAGGAATT ATCGAAACACCAACGACGTCAACAACAATGTGAATTCTGTCACGGGAAAA TATTCTGCGACAGcgcaaaatatcaagaacacaTGAGCAAATATCACATC TTTTGCGATTGttcgtgtcaaaaatattacaacaCCTTGGAGGAGTTTAT ACAACATTACGGTGGAGTGTACCCGCTTCCTTGTCTGGAGGTGCCCGATT GCAAGGAGCGTTTCCGAAACATCGATGAACAAGCTTTCCATCATAAATCA AGCCACGGTTCAAAGTATCCTTATTACTGCATAGCGTGTTACGGCCATCA GAAGTTGACGTGTTTACGTACGTCCGGAGAGCTTATGAAGCACGTGAATG ACGTGAAACATAAGAAAAACGAATTTCAGATTGTTATGATTCCAGAAGAA AGCCCTTTCGCTCATATGTATCAACAGCAGCAGAATTCATCCAGTGAAAA TTCAACGTGAGTG

Coding sequence (CDS) from alignment at sc0000071_pilon:493949..495461+

>MSTRG.10281.1.p1 ID=MSTRG.10281.1.p1|Name=MSTRG.10281.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1098bp|location=Sequence derived from alignment at sc0000071_pilon:493949..495461+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTTGCAGTCGCCTCCGTCGTAAAGGTTCGTCCTTACAACAATCACA
CAACAACCACAACAATTACAAGATCATTCTGGTCGAATGGGAAGACTGCG
GGCAACAATTCCTCAATGGAATATCATTCGCTTCCAAACAAGAGAACATA
CAAGTTCACATTTTCGTTAACCAATCAAAAGAAAGTACAACAGCCAATCA
GAACATACAAAATACTCGTATCGCTCTCAAAAATGTCGCAGTTTTTCACG
AGAGTTTGACCGATGGTAAAGATGCATCGTGGACGGACTTACTCGCTTAT
TTAATCAATTTTTACGCGCGCACAACTTTTTCGTGTCATCATTGCGCGGC
CATGCATTCGAAGCCGAACTACCAGGTTACTTTAGCAGCACGTGACCAGG
GGAAATATAAAGAGTTGAATGCTCTTTTGAAGTCGAATAAAACGGAAACG
AAAGTCGTGGATGGATGGAAGACAACATTACTGGATCTATTCCCTCACGT
GTGCACAGagtgtaaaataatttttaatgaccAAAGAGCGGCCCAGTTAC
ACGACAAAGAAGATCATAACTATCTCTGCGAGAATATGTCGTGTGAACGG
AGCCGTAGAGAGAATGGATTTTACAGCCACAAGGAATTATCGAAACACCA
ACGACGTCAACAACAATGTGAATTCTGTCACGGGAAAATATTCTGCGACA
GcgcaaaatatcaagaacacaTGAGCAAATATCACATCTTTTGCGATTGt
tcgtgtcaaaaatattacaacaCCTTGGAGGAGTTTATACAACATTACGG
TGGAGTGTACCCGCTTCCTTGTCTGGAGGTGCCCGATTGCAAGGAGCGTT
TCCGAAACATCGATGAACAAGCTTTCCATCATAAATCAAGCCACGGTTCA
AAGTATCCTTATTACTGCATAGCGTGTTACGGCCATCAGAAGTTGACGTG
TTTACGTACGTCCGGAGAGCTTATGAAGCACGTGAATGACGTGAAACATA
AGAAAAACGAATTTCAGATTGTTATGATTCCAGAAGAAAGCCCTTTCGCT
CATATGTATCAACAGCAGCAGAATTCATCCAGTGAAAATTCAACGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10281MSTRG.10281Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10281.1.p1MSTRG.10281.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10281.1.p1.exon1MSTRG.10281.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10281.1.p1.exon2MSTRG.10281.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000071_pilongenomesc0000071_pilon:493949..495461 +