|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000071_pilon:38974..44130+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10246.1.p1 ID=MSTRG.10246.1.p1|Name=MSTRG.10246.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5157bp|location=Sequence derived from alignment at sc0000071_pilon:38974..44130+ (Clytia hemisphaerica_ch_hm2_pilon)
cctaaatccCTGTTTTATTAATCTGATATGAATCCTTTTGTTTGACAAGG
AAAATAGAATTGAAAGATTAATCATAAAgtttttatacaatttttgatga
tgatgatgatgccATTGTTTTGCAATCTTTAGATGGTATCTGATGTCctt
tatttgacaaaaaaattaactttttctgcGGCACACCGTCTTCATTCCAA
AGAATTATTAGATGCTGAGAATGAAAAATTTTATGGGAAATGCAATCGTG
TACATGGACATAACTACACCGTAAAGGTAAAGGccgatttgaattttaaa
ggaATCTTGGACATTCATTTTTAGTTATTTCTTGACAAGTTTTCAAAGCT
ACCTGATGctttatattttccaaatgaaTAATTATATTTTCACCACGTTT
GTCATTGTAACGTCATTTTCTCtcatttgtttatattatttGTACTAAGT
GGTATTCTTTTCAGGACTTATAAACGTTTAAAGTAACTGTTTGTCACTCT
TTTGATCACCGCACTGTAACCTTCCCACTAATACCTCTTGTgacgttctt
aattttttcttaaataaaaagTCTCTTATAATACTATGCATTTGATGCAT
TTTTACTTATATGTAAAGTGGAAAAATAATGTATACGGTTATGTTAAAAG
CTTGAAATATTTATGAATTGTGTATTTTAGGTCACATTGCGTGGAAAAGT
TGATCCAAAGTTAGGTTATTTCATAAACGCCCATGAGCTCAAACAGTATA
TGATCACTGCAATTGACAATGTGTTAGACCATCGAAATATAGATGTAGAC
ATTCCTTTTTTCCGCCAACATGTCAGTACTATGGAGAATTTGTCCATCTT
TATTTGGCAAAGTATGAAAGATGTGATGAAGGAGCCTGATTTGCTTTATG
AAGTCAAGATCAAAGAGACGGATAGCAGTACTGTGGTTTATAGAGGCGAA
CAGACCTgatcaatatttcaaaagtcgCATTGGTTAGAATTTGTAATATA
TTATTAAATGAATTCTCTTTCTGAATCTCAAACCCTTTGAGACTGTTTTT
AATCTGTAGAGATGTTAAGATTCATAAACGTTTATTAATTTCCAAGTCTT
TCTCTACTGAATTAGTTATAACGTCTGAACGACAACAGTTTCAAAAGCAT
ATTTAAAGGCAAAGCAATCTCTTTTCACGAATTTCAATCAATAGTctgtt
tttatcattattttgacAGACCACTGTTTGATTCATTTCTTTCTTGTAAA
TGCTCTCTCAATACACAGTGGGTACAGGAATTCTCCTTCTTTGTAACTGT
TACTGCTTTAATGAAAAAGCCAACATTTTTGATTGACGAAAACACAATCT
CTCTTCAACTTGGCATCACCTGTAAGGAAACAGTATGAGTTTAATTCATT
CGACTGGGATGTTGTCCCTTTGATTTAGAGTATTTATAgagtaatatata
tttttttattatctgaACTTACGAGGAATATACTCTTTTCTAATGGTTAA
TTTTAAGGATTGCGATGTatatcttaaaaaaatattcaggtACATACAAA
TACATTGGAaattttttgtcgtttttttgctgttttatttcggggtggag
tttttcaaagaaattgtaTCTATATTTCAGAGAAATGTtgataaataaat
ttgttttgatcattTCAGTGAAttagaaaatataaacaaaaaagaaggAT
GGAGTTAGTAAAAGAACGCTTGAATCAAATGAAAGATGACTATGAAACTT
CTAATGACAAGATCATCAAATTCGAAAGTGAACTCCAAGAAAGTCGACGA
AATTTAGAATCTGCTGTCAACGAGAAAGAATCACTTTTGAGGCGTATTGA
AGTTGTCGAATCGCAAATCATCAATGCCAATAAGAATCGTGAACGGATCG
TTGATGATTTGAGGTATTTGGAACGCAATACAGATATCAATGAGGGGAAA
AGAAAATTCCTCGAAAATAAAGAACTCGAAGGTGACATAAACATTTGTCG
ACTTGAAGAGAGATTATCTGAAGTTCGAgataagttttttgaaaactccA
TCAAATGTGAAGAGGGTGAACGCAGGCTAGCCGTACTCCGATCCGATTTT
GATAAATTACGGTCTAGACGTTTGGAGATGCAGGAGCATGCGGTTTACTT
GCAGCGAGATTTGGATGAAAAGACATTGAAATCACGTGAAATGGAGGATC
ACTTGGCAAACAATGGTGCCAAGGAATACGATGATGAAGCCAATCTAAGG
ATTGTTGAGGATTTGCATCGTGAGGAATTGGATCGAGAAGAAAGAGCCAG
ATTGAGAGTTCAAAAGCTACAACGCGTCATCGAAATGGTTGAAGGTacat
ttatcaattttattgaagtGGGGAGGGTTaccagggtgtctacgggacct
tgaaaaccttgaaaaccttgaaaatgaaccacccaaccttgaaaaccttg
aaaactatcaattttctgggaaaaaccttgaaaaccttgaaaaatcgtta
aaaaccttgaaaagcaccatccagtcattcaaaaagtaagaataagtaaa
aaaccgcctgcggcgctaaacctttataacatttagagaattccatattt
ccctgtttctgttgcgattctgtcacatatttttttatcattagctgagt
ttttgtcactaattttccgtttgcatgagccctaagaaatcgactgttcc
ccaattttcaaatgacttcagggcgtcttggaataatggctgttcatcaa
taaaatttcgaggattccttaaaacaactcttttggcaattgatttttgt
aaaaaacaaaatcaaaaacaaggcgttttttagccatttgaaagagtcaa
aatcaaaattttctctcgtcggcgcaaaccatggttgcgcctcctcggtc
actgtaaacaattggttttgcttctaattctttatttcaaCAGTTGGAAG
ACTAGGGAGCTTGAGTATTTCCTTTTGTGGTATTCTTCTCGAGAGGGAGA
TAGGAATTTAACTGTGGAAGTAATTCCCCGGACACCAAaagcgaataaat
tttatttgctgtcctctatttttctttcacctagcactctgaaaaaaata
aaaaaaattctgtaaaGAGCCATAtcaactgagtatcaaaaaaacttgaa
aagtgccaaagtttttgccaaaaaaccttgaaaaaccacttaaaaatgac
caaaaaaaccttgaaaaccttgaaaaccccgaaaaaaaatccgtatACAC
CCTGGTTACGGTCTCTCTGAAGCAAGTCTGTAAAGTATATCATATTCCTT
CATCAGATAGGCTAATTTCTTACTAATATCAAGGAAAACCAATCTGGAGT
ATATAGTCTATGAAATAGAGTTTGAAATTTATGACGAGGATTAGTTCCTT
Tcctatactttaggcgtacaaactttcgtgagcagaaactttcgcgagga
cgaaaaattgcgaaattcacaacatttactttcgcgaatttaacggaaaa
tatttttcgcgagcataaactttcgcgaatcaagacgtaaaattgagaat
tttcacatgaaaaaatggcttagagacacaaatacttcttgtgttggctt
gaaacatttgtcttttgacttattagtcctttagcaggctaaaaagtgcc
ataaaagttacattttattcaaagtttgaagttttacagattttctattt
tgtcaagaatttttcgcgagcataaactttcgcgaatggcccttcctaga
atttttaaagacatttactttcgcgaaaagggccaaaattcgcgaaaatc
gcgaaagtttctgctcgcgaaagtttctacgcctaaagtatagcCTGATC
CCATAAAATAATCCAGCACCATCAGTTGAAGGGAATAGGGACCTTTAGCA
TCTAAGACGACGACTTGAATGAGGACGCGAAGTAAATCTTAAAATCGACG
GACGGGTATGTGCGgaggttaagggtatgtttttcaaaatagcagaaatg
cactgtaagggtggacttttgataaatgcaccgtatgggtggaaatttca
gcaaatctaggaaaaattgctaatttttgctcgaaaatcttgattttttt
gctctttaGAGTTTAAAGGTTGAaaagaaatgcactgtaagggtaatttc
accgattttttctgcactgtaagggtgcgattctaaaagccaattttttc
gccgcacacaCGTCAGTTGGTAAACTCCCCCTCCCCCGGGATCGACAAAG
ACTTGAAATTGACACTGTTTTTATCTTTAGATCAAATAGAAGAGGTTCGT
AGGCGAAAAAAGAAGCTGCAAGTTGAATACAAAAACTCTTTGGACATTAT
CGTGAATTAAGGAGAGCAATCAGCCATTTTTCTCTTGTTGCCATGGGTGT
GGAAGCCATAATGTTTATGAATTGGACAGTCTAACCGCAAATTGTTCAAA
AAGTCGAGATAATTAACAAAAAGGCAATTTATTCTTCCTGTGTTGATCAA
Gtattcatttttatcaatattgaaaacattttgttatatatttattttta
aaagaagttttcattttttaaaagcaaagtattatatGCACTCTCGTTAT
TTTATTTGTTGCATAGGTAGTCAGTCACTATTTTTAAAGCTATATTGCAC
GTGTTTTTGACAAGGTTTATTAATTGAAATGACTATAGCTTGACTGCAAA
TACAAGTTGATAATAATGATGATTAATATAATACGTTTCGTAGGAAatag
tttgatttaaaagcaAACAACTTTCAAAGACCAGCCTCCGATACTCCTCT
CAATCGAGCTCGTTTTTATGTGTTATAAAACAGCATATACTCatatcatt
tcataaattcATTAAGAAGAAAAGGACTTGGATGTAGGGagttctaactt
tttttcactgtTCGTGTATATATGTTCTCATGGAAAatatcttgaatatt
tttttctgaagacTATTTCGTGACTAGACttctgtttcactttttctttc
acagtatttcagaattttcaggctttcaattattaatatttcattatttt
ctcgAAAAGCCTTTTTCCTTCTAAATCTAAGGAAAATGAAAAGTCAAAAC
AATCTCTGTAAGGCTTTATGAAGAAGTCTttcctatttttttttattcaa
atttaag Coding sequence (CDS) from alignment at sc0000071_pilon:38974..44130+ >MSTRG.10246.1.p1 ID=MSTRG.10246.1.p1|Name=MSTRG.10246.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1452bp|location=Sequence derived from alignment at sc0000071_pilon:38974..44130+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGTTAGTAAAAGAACGCTTGAATCAAATGAAAGATGACTATGAAAC
TTCTAATGACAAGATCATCAAATTCGAAAGTGAACTCCAAGAAAGTCGAC
GAAATTTAGAATCTGCTGTCAACGAGAAAGAATCACTTTTGAGGCGTATT
GAAGTTGTCGAATCGCAAATCATCAATGCCAATAAGAATCGTGAACGGAT
CGTTGATGATTTGAGGTATTTGGAACGCAATACAGATATCAATGAGGGGA
AAAGAAAATTCCTCGAAAATAAAGAACTCGAAGGTGACATAAACATTTGT
CGACTTGAAGAGAGATTATCTGAAGTTCGAgataagttttttgaaaactc
cATCAAATGTGAAGAGGGTGAACGCAGGCTAGCCGTACTCCGATCCGATT
TTGATAAATTACGGTCTAGACGTTTGGAGATGCAGGAGCATGCGGTTTAC
TTGCAGCGAGATTTGGATGAAAAGACATTGAAATCACGTGAAATGGAGGA
TCACTTGGCAAACAATGGTGCCAAGGAATACGATGATGAAGCCAATCTAA
GGATTGTTGAGGATTTGCATCGTGAGGAATTGGATCGAGAAGAAAGAGCC
AGATTGAGAGTTCAAAAGCTACAACGCGTCATCGAAATGGTTGAAGATCA
AATAGAAGAGGTTCGTAGGCGAAAAAAGAAGCTGCAAGTTGAATACAAAA
ACTCTTTGGACATTATCGTGAATTAAATGGAGTTAGTAAAAGAACGCTTG
AATCAAATGAAAGATGACTATGAAACTTCTAATGACAAGATCATCAAATT
CGAAAGTGAACTCCAAGAAAGTCGACGAAATTTAGAATCTGCTGTCAACG
AGAAAGAATCACTTTTGAGGCGTATTGAAGTTGTCGAATCGCAAATCATC
AATGCCAATAAGAATCGTGAACGGATCGTTGATGATTTGAGGTATTTGGA
ACGCAATACAGATATCAATGAGGGGAAAAGAAAATTCCTCGAAAATAAAG
AACTCGAAGGTGACATAAACATTTGTCGACTTGAAGAGAGATTATCTGAA
GTTCGAgataagttttttgaaaactccATCAAATGTGAAGAGGGTGAACG
CAGGCTAGCCGTACTCCGATCCGATTTTGATAAATTACGGTCTAGACGTT
TGGAGATGCAGGAGCATGCGGTTTACTTGCAGCGAGATTTGGATGAAAAG
ACATTGAAATCACGTGAAATGGAGGATCACTTGGCAAACAATGGTGCCAA
GGAATACGATGATGAAGCCAATCTAAGGATTGTTGAGGATTTGCATCGTG
AGGAATTGGATCGAGAAGAAAGAGCCAGATTGAGAGTTCAAAAGCTACAA
CGCGTCATCGAAATGGTTGAAGATCAAATAGAAGAGGTTCGTAGGCGAAA
AAAGAAGCTGCAAGTTGAATACAAAAACTCTTTGGACATTATCGTGAATT
AA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000071_pilon | genome | sc0000071_pilon:38974..44130 + |
|
