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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000070_pilon:909112..914621- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10209.1.p1 ID=MSTRG.10209.1.p1|Name=MSTRG.10209.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5510bp|location=Sequence derived from alignment at sc0000070_pilon:909112..914621- (Clytia hemisphaerica_ch_hm2_pilon)
ATCGATTCAGGAAAAAATGTAAGATAAATTTTAACGATGGTACACAGTTG
GCACGCGAAAGGCAGATGAATTCAAAATTGACCCTGACAATAGTGATTCG
ATGTAGATTAAGATAATCAAAACTATACAAAAAGAACATGGGAATACTAT
TCTTAAATGTTTTTTGGATCATTTTTGCTTTCATAACTTTCGGGTATGGT
GACTTTCAAACAGACAAAACTTTCATCACAATCACACGTGATGTAAGAGA
CAGTTTCGTGAGCACAGGTAAGGGATCCACGAAATCGTTATGTGATAGAT
ACCCAGGTGCAAAGATGATTGATGAAGAAACATGTCGTTGTGCTGTGGAA
GGAGGGCTAACAACAGATTCACAGGGAGCAGTAAAAACCTTCAAATCACA
AAACACCAAAGAGATGGGGTGTTTCAACAGTGCTATTCATATAGGTGAGT
CTTCCTAAATCAAAATAAATCACTGGCGGCTGTGATTTTCCAAGGCGAAG
GATGTCATAAGACGTCTAGGATCACTACTAGTAAGTTCACCGCCCGTTTT
ATTTTTCAAACCCACAAACGACATTTAGCAAGAAAAGCCTATTCAATGTT
TTCTACGGAAGAACACCCCGGTTTTTGCCAGTGGTGAAAAATTACGTCAT
GAATATCATGAATTTGCATTTTAAATGGCGTCAAAATATTGTCTCTTCCT
TTTACCTTCATTTTTTGGAAATAGCCACAACGCTACTGTATAAAAAATAG
GAATTCCTGAAAAATAAGCGAAAAGAATATCTGCAACTAAACCAGACATA
GTAGAAATAAGCAAAAGATAATGCAAGGGACAAAACTACAAGTTTATATA
AACTGATATTAAACCGTAACAGTTAAAGCATACACAGTTTACTACAACAA
CTCCAGTCTATTTAAAGGTTTTGTTTTTAAATGATATTTTTATGTTCTGG
TTTACAGCCTGGTCTCCCTAGAGCGATTTGCATTCTTTTTAAGAGAATGT
AGTCCGCTTGCTTGCGCTCACTTCGCTAAAACCGTAAGGGCCAATCTACA
TGGCGTTGAGCAATTCTAAAGCATAAATAGGATAGTCCTCCAGTTGCTAG
TGAAGATAGGGCTTTCTGTTACATGAAAACATGAAAAAGAAGAAAAAAGA
GGCAGTTCATTTTCCGAGAAAACATGGTTGATCATGATAATGCATGCAAA
CCTTTTTATGGATTTTGGTGTAATCTTTGGATGTTTTGAATAGTTTTAGA
TCTTGTAAGACTGCTTTTTATTAATTTCTGGTTTGCTGCCCTGGGTTGGC
TAGGAAACATGGGTTTTCACTTTCATTCTCTAGGGAGACCAAGCTCTATA
ATTTTAGAACTTTGTATGTTGAGGTATTAAATTTTGTTTTTTCTAAAAAT
TTGAGCTTGGATATCCAGGCTACACCGATGGTTAATAAATCCAATAACCA
ACGAAAATCTATTGAATATATGTTTTATATACCTAGAGGCAAAAACCAAA
AACAAACCATAAATTATGTAAATAGTCGAAAGATTAACATAAAACACTCC
CATAATCGAACGTTCGAATGTCTTTCTTTTTTTAATGATTTTTCTTAATT
ACTTTGAGTCGTAAAATTTGTTCATGAAATCGACAATAGATTTATTTAAA
AAAATTTCTTTGAACTTTAAAAGCAAAATTTGAAAAAAAATCTACCGTGG
TATAATAGCCATGGTATATCAGGAATTATTCAATGGCTGTTTTTGCCTAC
AAGTATATAATACTGAGGTTAAGCATACAAGGACAATCACGACGACGGAC
GAAAAATGTATAAGGCTAGTGAAAATACGAAATTGGATTGGTTGAAACTC
ACTAGCCTGCTAAATTTTTGTTCGTCGTCGTGATTTTACCAATTTACTTA
ACCTCACTAATGATATCTAGTGATATCGTATGCTTACTCATCAATTTGAA
TTCTCAAGCTTTTTCACATTGGATTGACACGGATGTGGAGCAAGATTGGT
CAGAAAGAGGAAAAGAAAAACATATTTTTGCTTTTATCAGCACAATATAA
CAATAGGCAGACACTGTCCTGATATGAAATATGTGTCTTATATGAAACGG
GAACACTTATGTAAAAATAAAACCTTTAAGCGATGTTTGATAGAATTGTG
ATTTTTTTACAGACTGTCCAACGAGTATCTTCAAAAGTGATTTGATCAGA
ACCGGAATGGCGAACATAGAAATAACATGCGGTAAGAATTGCAAGAAAAT
GAAAGATATCTATCTATGGAATCTGGTAGTCACACCCAACAGTACGAAAG
AAAGCTGGATCAAATATCCGAGTATGACGATAGAGTATTTCCCAATAAGG
AAATCATCGGAAGATATTCACTACTTGGTGAGTCTCATTTTGCAACGAGT
GTTTTTAAACCTTTTATGCCCCGGGTTTTTTGGGTCTGGCCATGCTGTGG
GGTCGTAGAACCCATACACTCAAGACTGTTATGTTGTTGTCCATGAAATT
TGGTACAGAGATACTTCCTAAAACAATATTCAATAAAAAAAATATCATCG
CATAAGAATTTTGAGGTAAAATCCGGCCTAATCTTGCAATAAACGCGAAA
TGGACACTCAGCCACCCCTAGGAAATCGAGGAAAAGAATTAGACAGTTTT
ATTCTACATCTTGAGATTTTGCTTGGGCTGAAATGTTTTAATTTTTGGAA
TTCTTTTTTATATTGGTGTGAAAGGATTAATTTGTGGAGAAGTCAGAAAA
TTTGAAAATAATTGGAAAAGCGGTTACAATTCAACCGGGGGGAGGGGGCA
TTAAGAAAAATTAAAACCGAATATCTATCTGACATTCTTGCATCAGCTCA
TAACGAACATTACAGTAATAAACCCATGGTCCTTTTTGTAGGATGTGTCA
TGTGTGACAGACAAGATGTTTGGTCAATTGATAAAACTTGAATTCGAAGA
TGGTCAATGTTCAACTTTGAAATTCCAAGGCGAACAATCATTCCGTAAGT
TATAAACCGGCAATTTCTTTTCATATGTCTACTAATACAATAATGACCGG
TTAGTGAGGGCTGTACTGAGAAATGTTGCCCGAGGGCAATATTTTTGTAC
AGCCCGAAAAATAATGTCAGATAATGACGTGAGATACTGCCCTTTACCAA
TAGAAAAGTAAGTTTAAAAACATATTTGGTTTATGAAAGGTACAGAGAAT
GGTACAGAGAAGACAAACAATTACTTCAAGGTATTAACAACATTAAATAT
GCATGGTTTTTTGAAGAAAAATTTAATCTTAATTCATAATATGCACCATT
GCAATGTCTTCTGACATTATATCACGGACCCAACAGCTGTAACAGCTGAT
TGGTAGTAAGTGACGTACAGTCAGTCAATACGTCACTTTTAACCAATCAG
CTGTCGGGTCCGTGGAAAACATTGCAATGGTGCATATCATGAATTAGTCT
GATTCGCAGACCTATACTTCCTCTATAAGAAACTTTTTTCGCTAGAGGAT
GAGCAGAAGCCTAATCATGAATTACAGTGTAATTAGTAGTCAAAGCAAGG
TTTTGCATCTGAAACAGATAATGGATTTCAGAAAAACAGCACATATTGGT
GATATTTTGGTGAATCATGCAGAATTTTGAGACGGAAGCGCCTCCTTATA
TACTTCGCTGAGACGGAAGCGCCTCCTTATATACTTCGCTGAGACGGAAG
CGCCTCCTTATATACTTCGCTGAGACGGAAGCGCCTCCTTATATACTTCG
CTGAGACGGAAGCGCCTCCTTATATACTTCGCTGAGACAGAAATCCGTCT
GAGACGCAGAAACTTTTACTACACTGGTCAAAAATCTTTTCTCAGTGATT
CTTGTTCGTTCTTGTTAGAGATACCATTTCTCTACCAGAGAAAAACATTA
TTTAGTGAGATATGGGAAAAATTTCTTACGAGTAAATTAATCTTGACATA
TTTTTGAAATTTTTCAAATGAAAACTCAAAGAAAAGATTTCTTTATGAGA
AGAAAACTTAGGTTCTCCAAATAAATTTTTTCTTGGAATTCTTATCAAGG
GCCCTTTCAAGAAAAAAATTCTGCTGAAAAGTTATCGAAAGTTACACTGC
AATTGATTTCTTTTCAGCGAAACATTATTCCGAAATCCGATCCATAATGA
GTCAGATATTCCGAACAAAGTGTGAACAAGGGACGACTACAACGACCACT
CAAACAACAGCAACAACCACTCCAACAAAAGCAACGACCACCCTTACGAA
GACAACCACAACGACCAACCAGAATACAACAAAGACCAACGATTCGACAG
CCCAGACATTAACAACAAAATTGTTTTACTCAAAGACAACAAACAGACAG
CATTCTACAAAGCAACTATCCCTCAAACAAACACACGCCACGACAAACGA
GACACATTATATTGCCATTGGATTTGGGCTTCTTTTCCTCACAATCGTCT
TAATAGTTGCCATCAAAATAAGGTACAAGAAAAATTGAGAGAAAATCTAC
TTCAATTCTTAATTTAAAGAAACTAAAGCTCTAACGGCCGACTTTCTGCC
CTGCCTATTCTAAATGTTAGAGTAGACAGAAAGAGGGCACAAAGTTGGTA
GTTAAAATCTTAGCTTGGAAAATATTAAAAGAAGACATTGCATTGGCGTC
AAAAGAGGGCTATGCATTGACATATTAGAATAGGCAGGGCGAGAAGTGGG
CCATCTAAACTAGAGCTAAAATACAGTAACTGAGCTTTCACAATCCTACA
AGACGTAGGGTTTTTTCTTATCAGGTAATCAACGTAGAAATTTCTTTTCG
ACACGCTGAAGCTCTGAAGGTCAGAAGATCTTAACGTCTGGAAGATTTTA
ATTAGGGAATTTCGCCAGACCGCGTCACATATTTTGCGGCGGGAAACCTT
TATCCTAGTATCGGTTTTCTGGAATAGGCGGACGCAACAGTATTTCCAAG
CTATTTTGTGCAAGGGCAATTCAACCTGACTGGAGAAGGTGCACATTAAA
GGTCAACTCCATGAGAAATTGGCCCGCTTCTTTAGGGCTTTAGCGTTGGC
GGACGCAAATCCGCAAGATATCTAACCTTCGGCTCATCCTCTAGCGACAA
AAGTTTATCTTGTAGTCCGAATCGCACACCTCTATAGATATAAGCATAGT
CAATATAAAAAACCCCGGTCTGGAAGCCTTTTGTTTCTTTCCATTGTTTC
TTACTTGCATTGAAAAATTAGTTTCTTTTACTCACTTTTTGATAAACCAA
TCCCAAGAGCAGTACTTGGTAACGTGATCAAAAACTGAACAAATCGATTT
TCATCTTTTGATAATAACAAAGAATTAGCTCACAAAAAGTTAAAACAATA
GGCTTCCAGACCAGTGTTTTTTATATTGACTATGCTTATATCTATAGAGG
TGTGCGATTCGGACTACAAGATATCTAAGTATTCTAACAATAGTAATTAT
GTTTCATCTTCACAGGAAGCGAGTAAGAGATAGAAAACTCGAAACAGAGG
CACATCAAAC Coding sequence (CDS) from alignment at sc0000070_pilon:909112..914621- >MSTRG.10209.1.p1 ID=MSTRG.10209.1.p1|Name=MSTRG.10209.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5115bp|location=Sequence derived from alignment at sc0000070_pilon:909112..914621- (Clytia hemisphaerica_ch_hm2_pilon)
GAAGCGAGTAAGAGATAGAAAACTCGAAACAGAGGCACATCAACGAAACA
TTATTCCGAAATCCGATCCATAATGAGTCAGATATTCCGAACAAAGTGTG
AACAAGGGACGACTACAACGACCACTCAAACAACAGCAACAACCACTCCA
ACAAAAGCAACGACCACCCTTACGAAGACAACCACAACGACCAACCAGAA
TACAACAAAGACCAACGATTCGACAGCCCAGACATTAACAACAAAATTGT
TTTACTCAAAGACAACAAACAGACAGCATTCTACAAAGCAACTATCCCTC
AAACAAACACACGCCACGACAAACGAGACACATTATATTGCCATTGGATT
TGGGCTTCTTTTCCTCACAATCGTCTTAATAGTTGCCATCAAAATAAGGA
TGTGTCATGTGTGACAGACAAGATGTTTGGTCAATTGATAAAACTTGAAT
TCGAAGATGGTCAATGTTCAACTTTGAAATTCCAAGGCGAACAATCATTC
CACTGTCCAACGAGTATCTTCAAAAGTGATTTGATCAGAACCGGAATGGC
GAACATAGAAATAACATGCGGTAAGAATTGCAAGAAAATGAAAGATATCT
ATCTATGGAATCTGGTAGTCACACCCAACAGTACGAAAGAAAGCTGGATC
AAATATCCGAGTATGACGATAGAGTATTTCCCAATAAGGAAATCATCGGA
AGATATTCACTACTTGATGGGAATACTATTCTTAAATGTTTTTTGGATCA
TTTTTGCTTTCATAACTTTCGGGTATGGTGACTTTCAAACAGACAAAACT
TTCATCACAATCACACGTGATGTAAGAGACAGTTTCGTGAGCACAGGTAA
GGGATCCACGAAATCGTTATGTGATAGATACCCAGGTGCAAAGATGATTG
ATGAAGAAACATGTCGTTGTGCTGTGGAAGGAGGGCTAACAACAGATTCA
CAGGGAGCAGTAAAAACCTTCAAATCACAAAACACCAAAGAGATGGGGTG
TTTCAACAGTGCTATTCATATAGGAAGCGAGTAAGAGATAGAAAACTCGA
AACAGAGGCACATCAACGAAACATTATTCCGAAATCCGATCCATAATGAG
TCAGATATTCCGAACAAAGTGTGAACAAGGGACGACTACAACGACCACTC
AAACAACAGCAACAACCACTCCAACAAAAGCAACGACCACCCTTACGAAG
ACAACCACAACGACCAACCAGAATACAACAAAGACCAACGATTCGACAGC
CCAGACATTAACAACAAAATTGTTTTACTCAAAGACAACAAACAGACAGC
ATTCTACAAAGCAACTATCCCTCAAACAAACACACGCCACGACAAACGAG
ACACATTATATTGCCATTGGATTTGGGCTTCTTTTCCTCACAATCGTCTT
AATAGTTGCCATCAAAATAAGGATGTGTCATGTGTGACAGACAAGATGTT
TGGTCAATTGATAAAACTTGAATTCGAAGATGGTCAATGTTCAACTTTGA
AATTCCAAGGCGAACAATCATTCCACTGTCCAACGAGTATCTTCAAAAGT
GATTTGATCAGAACCGGAATGGCGAACATAGAAATAACATGCGGTAAGAA
TTGCAAGAAAATGAAAGATATCTATCTATGGAATCTGGTAGTCACACCCA
ACAGTACGAAAGAAAGCTGGATCAAATATCCGAGTATGACGATAGAGTAT
TTCCCAATAAGGAAATCATCGGAAGATATTCACTACTTGATGGGAATACT
ATTCTTAAATGTTTTTTGGATCATTTTTGCTTTCATAACTTTCGGGTATG
GTGACTTTCAAACAGACAAAACTTTCATCACAATCACACGTGATGTAAGA
GACAGTTTCGTGAGCACAGGTAAGGGATCCACGAAATCGTTATGTGATAG
ATACCCAGGTGCAAAGATGATTGATGAAGAAACATGTCGTTGTGCTGTGG
AAGGAGGGCTAACAACAGATTCACAGGGAGCAGTAAAAACCTTCAAATCA
CAAAACACCAAAGAGATGGGGTGTTTCAACAGTGCTATTCATATAGGAAG
CGAGTAAGAGATAGAAAACTCGAAACAGAGGCACATCAACGAAACATTAT
TCCGAAATCCGATCCATAATGAGTCAGATATTCCGAACAAAGTGTGAACA
AGGGACGACTACAACGACCACTCAAACAACAGCAACAACCACTCCAACAA
AAGCAACGACCACCCTTACGAAGACAACCACAACGACCAACCAGAATACA
ACAAAGACCAACGATTCGACAGCCCAGACATTAACAACAAAATTGTTTTA
CTCAAAGACAACAAACAGACAGCATTCTACAAAGCAACTATCCCTCAAAC
AAACACACGCCACGACAAACGAGACACATTATATTGCCATTGGATTTGGG
CTTCTTTTCCTCACAATCGTCTTAATAGTTGCCATCAAAATAAGGATGTG
TCATGTGTGACAGACAAGATGTTTGGTCAATTGATAAAACTTGAATTCGA
AGATGGTCAATGTTCAACTTTGAAATTCCAAGGCGAACAATCATTCCACT
GTCCAACGAGTATCTTCAAAAGTGATTTGATCAGAACCGGAATGGCGAAC
ATAGAAATAACATGCGGTAAGAATTGCAAGAAAATGAAAGATATCTATCT
ATGGAATCTGGTAGTCACACCCAACAGTACGAAAGAAAGCTGGATCAAAT
ATCCGAGTATGACGATAGAGTATTTCCCAATAAGGAAATCATCGGAAGAT
ATTCACTACTTGATGGGAATACTATTCTTAAATGTTTTTTGGATCATTTT
TGCTTTCATAACTTTCGGGTATGGTGACTTTCAAACAGACAAAACTTTCA
TCACAATCACACGTGATGTAAGAGACAGTTTCGTGAGCACAGGTAAGGGA
TCCACGAAATCGTTATGTGATAGATACCCAGGTGCAAAGATGATTGATGA
AGAAACATGTCGTTGTGCTGTGGAAGGAGGGCTAACAACAGATTCACAGG
GAGCAGTAAAAACCTTCAAATCACAAAACACCAAAGAGATGGGGTGTTTC
AACAGTGCTATTCATATAGGAAGCGAGTAAGAGATAGAAAACTCGAAACA
GAGGCACATCAACGAAACATTATTCCGAAATCCGATCCATAATGAGTCAG
ATATTCCGAACAAAGTGTGAACAAGGGACGACTACAACGACCACTCAAAC
AACAGCAACAACCACTCCAACAAAAGCAACGACCACCCTTACGAAGACAA
CCACAACGACCAACCAGAATACAACAAAGACCAACGATTCGACAGCCCAG
ACATTAACAACAAAATTGTTTTACTCAAAGACAACAAACAGACAGCATTC
TACAAAGCAACTATCCCTCAAACAAACACACGCCACGACAAACGAGACAC
ATTATATTGCCATTGGATTTGGGCTTCTTTTCCTCACAATCGTCTTAATA
GTTGCCATCAAAATAAGGATGTGTCATGTGTGACAGACAAGATGTTTGGT
CAATTGATAAAACTTGAATTCGAAGATGGTCAATGTTCAACTTTGAAATT
CCAAGGCGAACAATCATTCCACTGTCCAACGAGTATCTTCAAAAGTGATT
TGATCAGAACCGGAATGGCGAACATAGAAATAACATGCGGTAAGAATTGC
AAGAAAATGAAAGATATCTATCTATGGAATCTGGTAGTCACACCCAACAG
TACGAAAGAAAGCTGGATCAAATATCCGAGTATGACGATAGAGTATTTCC
CAATAAGGAAATCATCGGAAGATATTCACTACTTGATGGGAATACTATTC
TTAAATGTTTTTTGGATCATTTTTGCTTTCATAACTTTCGGGTATGGTGA
CTTTCAAACAGACAAAACTTTCATCACAATCACACGTGATGTAAGAGACA
GTTTCGTGAGCACAGGTAAGGGATCCACGAAATCGTTATGTGATAGATAC
CCAGGTGCAAAGATGATTGATGAAGAAACATGTCGTTGTGCTGTGGAAGG
AGGGCTAACAACAGATTCACAGGGAGCAGTAAAAACCTTCAAATCACAAA
ACACCAAAGAGATGGGGTGTTTCAACAGTGCTATTCATATAGGAAGCGAG
TAAGAGATAGAAAACTCGAAACAGAGGCACATCAACGAAACATTATTCCG
AAATCCGATCCATAATGAGTCAGATATTCCGAACAAAGTGTGAACAAGGG
ACGACTACAACGACCACTCAAACAACAGCAACAACCACTCCAACAAAAGC
AACGACCACCCTTACGAAGACAACCACAACGACCAACCAGAATACAACAA
AGACCAACGATTCGACAGCCCAGACATTAACAACAAAATTGTTTTACTCA
AAGACAACAAACAGACAGCATTCTACAAAGCAACTATCCCTCAAACAAAC
ACACGCCACGACAAACGAGACACATTATATTGCCATTGGATTTGGGCTTC
TTTTCCTCACAATCGTCTTAATAGTTGCCATCAAAATAAGGATGTGTCAT
GTGTGACAGACAAGATGTTTGGTCAATTGATAAAACTTGAATTCGAAGAT
GGTCAATGTTCAACTTTGAAATTCCAAGGCGAACAATCATTCCACTGTCC
AACGAGTATCTTCAAAAGTGATTTGATCAGAACCGGAATGGCGAACATAG
AAATAACATGCGGTAAGAATTGCAAGAAAATGAAAGATATCTATCTATGG
AATCTGGTAGTCACACCCAACAGTACGAAAGAAAGCTGGATCAAATATCC
GAGTATGACGATAGAGTATTTCCCAATAAGGAAATCATCGGAAGATATTC
ACTACTTGATGGGAATACTATTCTTAAATGTTTTTTGGATCATTTTTGCT
TTCATAACTTTCGGGTATGGTGACTTTCAAACAGACAAAACTTTCATCAC
AATCACACGTGATGTAAGAGACAGTTTCGTGAGCACAGGTAAGGGATCCA
CGAAATCGTTATGTGATAGATACCCAGGTGCAAAGATGATTGATGAAGAA
ACATGTCGTTGTGCTGTGGAAGGAGGGCTAACAACAGATTCACAGGGAGC
AGTAAAAACCTTCAAATCACAAAACACCAAAGAGATGGGGTGTTTCAACA
GTGCTATTCATATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000070_pilon | genome | sc0000070_pilon:909112..914621 - |
|
