MSTRG.10204.1.p1 (mRNA) -

Overview
NameMSTRG.10204.1.p1
Unique NameMSTRG.10204.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000070_pilon:820556..822431-

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10204.1.p1 ID=MSTRG.10204.1.p1|Name=MSTRG.10204.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1876bp|location=Sequence derived from alignment at sc0000070_pilon:820556..822431- (Clytia hemisphaerica_ch_hm2_pilon)
AGGCAAACGAAACTCGATAAGTCAAGTAATTCATGAACCTACAACATGTA TAAAAAGACCACTAAATTTCAACAAAACACCTAACACTGGTTCAAAGCTG GCGAAGAACAGTAAAATGGCGCTAACAGGAAGTCGAATCTTCATATTCAT CTGTATACAATGGTTCGCGTATACATCAGCCACTGGCAATGAAACAGTAC ATGTCTTGGTTGACCGATCAATCTCCAATCTACAGAAAATCAAACTAAAG ATGAAGTTACTTTCTCAGGTCAAAAAGATGTATGGCGATTGTTTGCCATG TAGATCAATCTCTAATAGCAAAAGCTGTGATTGTACAGCCATCAAACCGA TGGAAGATTGTCTGGAGTTTTTGCAGAACGGCTACACCAAGAATGGAATC TACAAAGTAACACAGAGAGAAAAGACTGTCTACTGCGATCAAACCACTCA AAATGGTGGCTGGACGGTTTTCTTAAGGAGACAAGATGGATCCACAGACT TCCAACAGAACTGGCTGGACTACAAATATGGTTTTGGTAAGCTGACCAGT GAATTTTGGCTTGGAAATGAAATAGTCCATGATTTGACCAAACCATCAGT GGCTCCAAAGAAGTCAGAGCTGTTGATCAATATGCGAATGAAAGGACAAA CCAAATTAGTTTTCGCCAAATACGACACTTTTGAAATTGGAGATGAGGCG AGCAAATACACATTGAAGATCAGTGGTGTATCAGGCAATGCACCTCATTC GACTGGATCATATTCTTTTCTTGGTAACCATAACAACATGAAGTTTTCAA CGTATGATCGGGATAATGACAAAGATCGTTCTAGACATTGTTCGACTGAA TACGGAAGAGTTGGCTGGTGGTTCAATCGTTGCTACATCACGCTTTTGAC TGGTAATTACAAATTCACGGGACACAGCAATGGCGAGATCTCTTGGAATA ATAATCCCGGTGATGTCGAACCCAAGTTTGTCCAAATGATGATGCGCCGT AAGCTCTAATCATTAAAAAGTAAGTTCATTTTATAGATTACGAGATGATT TCAAAATCTTTTAAATCAAAATAAGAAAATCTTTTTAATAAAAACTTCAA CCACAGCGTCAACGTTCGGATTTTTGACATCGCGGCACGTAACAAAATTC TTGTTATGATTTGACTTTTTTCCTCTGATGGTTAATTTTCAAGCGACTTC AAAAATTTACCGTGCACGTAGGAAAATTGTGGCCATTTATTTCAGGTTAT TTAAAAATTTGTTTTGCTAAAAAAGTTTTTTTGGGTTATTTTTTGATTGG GTCAATCCTAAAATTTCCTCTGTTGGATTCTCTATCCCTAAATCCTCTTA ATTTTGATAACATCATCGGACGTCCAGAAAATCTTACAGTTTCAATACAT ACATAACATGTAAAATTACTTTCTTTTTTCAGAACAACCTCAAAACCGTG GACACGAAGCAATGAAAAAATTGATAAAGAAGTTCAAACGATCAGATGAG AATCAATACAATCATATTTTAGTCTAATTTTCTAAGAAATTGTATGTTTC AAACTCTGAAAAAACTTGAATGTTCTTAAAATGTTCTTAAATTTATAGCT TAGAATATCGTATGTTCTTATTATATAATCATATTGTTTTTTTCGTTCTT TCAGTTAAATTTATCTTGTAACAACGTCTGAAGATTTTGAAACCTTCGGA GCGTGGGTTTTAAGTCTAAAAAATGTTCGTAATATGCTCCTATTTTTAGT CTAAATTAATTTCACATTTGTTTTTAGTTCAAGCGTTACTCAAGATAAAT CAAAAATCCATCCGACACTAAGATAAAAATTGAAATTTTGTGAAAATGGT TGTTAGAGGCTAACTGATTCCAAAAT

Coding sequence (CDS) from alignment at sc0000070_pilon:820556..822431-

>MSTRG.10204.1.p1 ID=MSTRG.10204.1.p1|Name=MSTRG.10204.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1008bp|location=Sequence derived from alignment at sc0000070_pilon:820556..822431- (Clytia hemisphaerica_ch_hm2_pilon)
GGCAAACGAAACTCGATAAGTCAAGTAATTCATGAACCTACAACATGTAT
AAAAAGACCACTAAATTTCAACAAAACACCTAACACTGGTTCAAAGCTGG
CGAAGAACAGTAAAATGGCGCTAACAGGAAGTCGAATCTTCATATTCATC
TGTATACAATGGTTCGCGTATACATCAGCCACTGGCAATGAAACAGTACA
TGTCTTGGTTGACCGATCAATCTCCAATCTACAGAAAATCAAACTAAAGA
TGAAGTTACTTTCTCAGGTCAAAAAGATGTATGGCGATTGTTTGCCATGT
AGATCAATCTCTAATAGCAAAAGCTGTGATTGTACAGCCATCAAACCGAT
GGAAGATTGTCTGGAGTTTTTGCAGAACGGCTACACCAAGAATGGAATCT
ACAAAGTAACACAGAGAGAAAAGACTGTCTACTGCGATCAAACCACTCAA
AATGGTGGCTGGACGGTTTTCTTAAGGAGACAAGATGGATCCACAGACTT
CCAACAGAACTGGCTGGACTACAAATATGGTTTTGGTAAGCTGACCAGTG
AATTTTGGCTTGGAAATGAAATAGTCCATGATTTGACCAAACCATCAGTG
GCTCCAAAGAAGTCAGAGCTGTTGATCAATATGCGAATGAAAGGACAAAC
CAAATTAGTTTTCGCCAAATACGACACTTTTGAAATTGGAGATGAGGCGA
GCAAATACACATTGAAGATCAGTGGTGTATCAGGCAATGCACCTCATTCG
ACTGGATCATATTCTTTTCTTGGTAACCATAACAACATGAAGTTTTCAAC
GTATGATCGGGATAATGACAAAGATCGTTCTAGACATTGTTCGACTGAAT
ACGGAAGAGTTGGCTGGTGGTTCAATCGTTGCTACATCACGCTTTTGACT
GGTAATTACAAATTCACGGGACACAGCAATGGCGAGATCTCTTGGAATAA
TAATCCCGGTGATGTCGAACCCAAGTTTGTCCAAATGATGATGCGCCGTA
AGCTCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10204MSTRG.10204Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10204.1.p1.exon2MSTRG.10204.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10204.1.p1.exon1MSTRG.10204.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10204.1.p1MSTRG.10204.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000070_pilongenomesc0000070_pilon:820556..822431 -