MSTRG.10165.1.p1 (mRNA) -

Overview
NameMSTRG.10165.1.p1
Unique NameMSTRG.10165.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000070_pilon:163852..165183+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10165.1.p1 ID=MSTRG.10165.1.p1|Name=MSTRG.10165.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1332bp|location=Sequence derived from alignment at sc0000070_pilon:163852..165183+ (Clytia hemisphaerica_ch_hm2_pilon)
CAAATATTTGTCTTGGAATTTATGCATTTAAAAAGCACCGATCTAACTAA CTAAGACATTGCTTCATTATAAAGAAAAGCATTGTACAGAAGATATCTCA CACTTGCACACCATGGGACAAACGGTTCTTCGTATTGCTAGTCTCATCCT CTTTTGTGCATGCGCCCTTGCAGAAGAGGAATGCACTTTGATCGATGATC TTAAAAGACTAAAAATACAGGTTGGTTTCTTCATTAAACACTTTAGCTTT ATAAAttatctctataactcgaactaaTTTGTGTTCCATTGTGCGTGTTC AAAtaatggagactccactgtatatacAACGGCTggggattttcaaaaat tacagtGACTGTGTTACAGTGGGGTGAGaaagtttatgaactttttTCAA TTGGATGAATCTTCATGGTACTTTTTTCACTGGGACGAGTTCTTAATTAA CGTTTGCTAGTAGAAGGGGTTCGACAACCGGTTCTGTGATACAGGTTGCA TATTTTGACACTGATTAGAAACTCttttttttAGTCTCGCCTCAATCGTC ATTTAGTGGGACATTGGAAAATGGACGAGCAGGAGAAAAACAATGTTGAT GATGACTCTGGTAATGAACTTCATGGTATGGCTACATCGACAACTAAAGT ATCTCGTGGCAAATTCACTCGTGGAAGATATTTCTCATCGACCAGTGATA atatcattgtgccaaaaagtCCTCTCATGGATTTCGGAAGTAACAGTTTT TCATTCGCTGGTTGGATCAAGGCAGAAAATTACACTTATCCCCACACAGC ATTTTCAGCCCGTCAAGGATTTGGTTGTTACTTTAAACCAGGGAGACCAG GATTCACCGCAGGTTGGGAAATAGGTCATGGACATTCAGTGGGTAATGAT AAAACCAGTATCTGTATACGAGATGATTCTCAAAATTATGTTCGTAAATA TATCAAACATGACGCAGGGTTCCAGGGAGCCGCTCTTTTGAACAAGTGGG CCCACTTCACAATTGCCTTTGACAGACATGCTCAACGCGTCAATCTCTAC ATCAATGGGAAGAAACAAGACGACTACGCTGACATCTCCAAAGTCAAAGG CAGCATCAACAATGACAAACCATTGAATTTTGGCACACTCTACGGCTGGA AAACTAAAGGTACAATCGATGACTATAGAATGTACAACATCGCTTTGAAA AGCGAAGAGGTCGCAGTCATATTCGAGAATCATAGACTGTAAAATAGTTA TGTGGAATTTTATTTTACAATGAATACGGTATAGATTGTAAAACAGGTCA Cttgtttttaaagatttcagtcagaaacaaga

Coding sequence (CDS) from alignment at sc0000070_pilon:163852..165183+

>MSTRG.10165.1.p1 ID=MSTRG.10165.1.p1|Name=MSTRG.10165.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1632bp|location=Sequence derived from alignment at sc0000070_pilon:163852..165183+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGACAAACGGTTCTTCGTATTGCTAGTCTCATCCTCTTTTGTGCATG
CGCCCTTGCAGAAGAGGAATGCACTTTGATCGATGATCTTAAAAGACTAA
AAATACAGTCTCGCCTCAATCGTCATTTAGTGGGACATTGGAAAATGGAC
GAGCAGGAGAAAAACAATGTTGATGATGACTCTGGTAATGAACTTCATGG
TATGGCTACATCGACAACTAAAGTATCTCGTGGCAAATTCACTCGTGGAA
GATATTTCTCATCGACCAGTGATAatatcattgtgccaaaaagtCCTCTC
ATGGATTTCGGAAGTAACAGTTTTTCATTCGCTGGTTGGATCAAGGCAGA
AAATTACACTTATCCCCACACAGCATTTTCAGCCCGTCAAGGATTTGGTT
GTTACTTTAAACCAGGGAGACCAGGATTCACCGCAGGTTGGGAAATAGGT
CATGGACATTCAGTGGGTAATGATAAAACCAGTATCTGTATACGAGATGA
TTCTCAAAATTATGTTCGTAAATATATCAAACATGACGCAGGGTTCCAGG
GAGCCGCTCTTTTGAACAAGTGGGCCCACTTCACAATTGCCTTTGACAGA
CATGCTCAACGCGTCAATCTCTACATCAATGGGAAGAAACAAGACGACTA
CGCTGACATCTCCAAAGTCAAAGGCAGCATCAACAATGACAAACCATTGA
ATTTTGGCACACTCTACGGCTGGAAAACTAAAGGTACAATCGATGACTAT
AGAATGTACAACATCGCTTTGAAAAGCGAAGAGGTCGCAGTCATATTCGA
GAATCATAGACTGTAAATGGGACAAACGGTTCTTCGTATTGCTAGTCTCA
TCCTCTTTTGTGCATGCGCCCTTGCAGAAGAGGAATGCACTTTGATCGAT
GATCTTAAAAGACTAAAAATACAGTCTCGCCTCAATCGTCATTTAGTGGG
ACATTGGAAAATGGACGAGCAGGAGAAAAACAATGTTGATGATGACTCTG
GTAATGAACTTCATGGTATGGCTACATCGACAACTAAAGTATCTCGTGGC
AAATTCACTCGTGGAAGATATTTCTCATCGACCAGTGATAatatcattgt
gccaaaaagtCCTCTCATGGATTTCGGAAGTAACAGTTTTTCATTCGCTG
GTTGGATCAAGGCAGAAAATTACACTTATCCCCACACAGCATTTTCAGCC
CGTCAAGGATTTGGTTGTTACTTTAAACCAGGGAGACCAGGATTCACCGC
AGGTTGGGAAATAGGTCATGGACATTCAGTGGGTAATGATAAAACCAGTA
TCTGTATACGAGATGATTCTCAAAATTATGTTCGTAAATATATCAAACAT
GACGCAGGGTTCCAGGGAGCCGCTCTTTTGAACAAGTGGGCCCACTTCAC
AATTGCCTTTGACAGACATGCTCAACGCGTCAATCTCTACATCAATGGGA
AGAAACAAGACGACTACGCTGACATCTCCAAAGTCAAAGGCAGCATCAAC
AATGACAAACCATTGAATTTTGGCACACTCTACGGCTGGAAAACTAAAGG
TACAATCGATGACTATAGAATGTACAACATCGCTTTGAAAAGCGAAGAGG
TCGCAGTCATATTCGAGAATCATAGACTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10165MSTRG.10165Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10165.1.p1.exon1MSTRG.10165.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10165.1.p1.exon2MSTRG.10165.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10165.1.p1MSTRG.10165.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000070_pilongenomesc0000070_pilon:163852..165183 +