MSTRG.10149.5.p1 (mRNA) -

Overview
NameMSTRG.10149.5.p1
Unique NameMSTRG.10149.5.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000069_pilon:1530659..1531811-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10149.5.p1 ID=MSTRG.10149.5.p1|Name=MSTRG.10149.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1153bp|location=Sequence derived from alignment at sc0000069_pilon:1530659..1531811- (Clytia hemisphaerica_ch_hm2_pilon)
AGAAAAATCAATATACTAATCAGAAATTAACTAATACTGTATACACTGAT
GGATAACCTTGGTGGTTTTGACGTTGAGTTTGTTCTAGAGGAGAAAGACG
ATTTGAAATGTTCAATTTGTTTACTGGTGCTCAGAGAACCAATGCAAGCA
GAGCAGTGTGGACATCGATTTTGCAAAGGCTGTGTCATCAACTTACCTAA
GAGGTAGATAGTCTTCTCATTGGTTTCGCTAGTTTCCAGTGCCCTGTGTG
TAAGAAATTTCAGCTGTGCTCAGGAAATAGACGATGACCAGATCAATGTT
AATGGGGCTATTCATTTCAAATTATTTTGACTGCAATGACTGCCTCATTT
TGAAAGCATTACCGAGGTAATTAGATTCTACTTAGGCGAAAGGTCATTTA
ATTTCTTCTATAGGGACTAGTTTTGATTCTGCATCAACAACCTAATGCAT
TTCAATAGAGATATACTCAATAAATTTATATATTTTCACATGTACGTTAT
ATATTTCAGCGATAAAAAGGGATATATTTGTCCGATCGATCGAAGCAAAA
TGACGGTAAGTATCCGAATGATATACTAGGAAAATACTTTTAATGATTTT
TAATAATTTTTAATGATTTCAATTAATTTTTTGTCTAAATGATATGTCTG
ATTATTTTCCTAGTTGTTTCAAGATAAAGGTCGTGAGCGGGAAATTTTGG
ACCGCTTAATTAAATGTGTGAATCACACAGACGGATGTTGTTGGACAAAC
GAGTTGCGAGAACTGCAGGTGAAACATACATGTGTGATCTCGTCTTGAAT
TATTTGTGAAATTTTCTTATTATTATAAATGAGATTTCATTGGAAGATTT
TTCCTAAGGCATGTATCAGTTAAATTAAAAGTCCATAATTTTTGACAGGA
TGAACGATGAAATTCGGAGTTATTTATGGTAAATCAAGGAAAATGAAGTC
TTTGTCTATTTTGTATTGGTGATAAGATGAGGCAAGCGTTGGTTCTTTTT
GCATCTTAGAACCACGTGAAAAATTGTGAATATGAGGAACTCGTTTGTAC
TATGACTGGTTGTGGTACAAAATTTCAAAGGAGGTTCTTCTCAAAACACA
ACGAAGAAGATTGTGTCTGCAGAATGATGTCTTGTCCTTTCTGCTTTGAA
GAT

Coding sequence (CDS) from alignment at sc0000069_pilon:1530659..1531811-

>MSTRG.10149.5.p1 ID=MSTRG.10149.5.p1|Name=MSTRG.10149.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1800bp|location=Sequence derived from alignment at sc0000069_pilon:1530659..1531811- (Clytia hemisphaerica_ch_hm2_pilon)
AACCACGTGAAAAATTGTGAATATGAGGAACTCGTTTGTACTATGACTGG
TTGTGGTACAAAATTTCAAAGGAGGTTCTTCTCAAAACACAACGAAGAAG
ATTGTGTCTGCAGAATGATGTCTTGTCCTTTCTGCTTTGAAGATTTGTTT
CAAGATAAAGGTCGTGAGCGGGAAATTTTGGACCGCTTAATTAAATGTGT
GAATCACACAGACGGATGTTGTTGGACAAACGAGTTGCGAGAACTGCAGC
GATAAAAAGGGATATATTTGTCCGATCGATCGAAGCAAAATGACGATGGA
TAACCTTGGTGGTTTTGACGTTGAGTTTGTTCTAGAGGAGAAAGACGATT
TGAAATGTTCAATTTGTTTACTGGTGCTCAGAGAACCAATGCAAGCAGAG
CAGTGTGGACATCGATTTTGCAAAGGCTGTGTCATCAACTTACCTAAGAG
AACCACGTGAAAAATTGTGAATATGAGGAACTCGTTTGTACTATGACTGG
TTGTGGTACAAAATTTCAAAGGAGGTTCTTCTCAAAACACAACGAAGAAG
ATTGTGTCTGCAGAATGATGTCTTGTCCTTTCTGCTTTGAAGATTTGTTT
CAAGATAAAGGTCGTGAGCGGGAAATTTTGGACCGCTTAATTAAATGTGT
GAATCACACAGACGGATGTTGTTGGACAAACGAGTTGCGAGAACTGCAGC
GATAAAAAGGGATATATTTGTCCGATCGATCGAAGCAAAATGACGATGGA
TAACCTTGGTGGTTTTGACGTTGAGTTTGTTCTAGAGGAGAAAGACGATT
TGAAATGTTCAATTTGTTTACTGGTGCTCAGAGAACCAATGCAAGCAGAG
CAGTGTGGACATCGATTTTGCAAAGGCTGTGTCATCAACTTACCTAAGAG
AACCACGTGAAAAATTGTGAATATGAGGAACTCGTTTGTACTATGACTGG
TTGTGGTACAAAATTTCAAAGGAGGTTCTTCTCAAAACACAACGAAGAAG
ATTGTGTCTGCAGAATGATGTCTTGTCCTTTCTGCTTTGAAGATTTGTTT
CAAGATAAAGGTCGTGAGCGGGAAATTTTGGACCGCTTAATTAAATGTGT
GAATCACACAGACGGATGTTGTTGGACAAACGAGTTGCGAGAACTGCAGC
GATAAAAAGGGATATATTTGTCCGATCGATCGAAGCAAAATGACGATGGA
TAACCTTGGTGGTTTTGACGTTGAGTTTGTTCTAGAGGAGAAAGACGATT
TGAAATGTTCAATTTGTTTACTGGTGCTCAGAGAACCAATGCAAGCAGAG
CAGTGTGGACATCGATTTTGCAAAGGCTGTGTCATCAACTTACCTAAGAG
AACCACGTGAAAAATTGTGAATATGAGGAACTCGTTTGTACTATGACTGG
TTGTGGTACAAAATTTCAAAGGAGGTTCTTCTCAAAACACAACGAAGAAG
ATTGTGTCTGCAGAATGATGTCTTGTCCTTTCTGCTTTGAAGATTTGTTT
CAAGATAAAGGTCGTGAGCGGGAAATTTTGGACCGCTTAATTAAATGTGT
GAATCACACAGACGGATGTTGTTGGACAAACGAGTTGCGAGAACTGCAGC
GATAAAAAGGGATATATTTGTCCGATCGATCGAAGCAAAATGACGATGGA
TAACCTTGGTGGTTTTGACGTTGAGTTTGTTCTAGAGGAGAAAGACGATT
TGAAATGTTCAATTTGTTTACTGGTGCTCAGAGAACCAATGCAAGCAGAG
CAGTGTGGACATCGATTTTGCAAAGGCTGTGTCATCAACTTACCTAAGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10149MSTRG.10149Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10149.5.p1MSTRG.10149.5.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10149.5.p1.exon4MSTRG.10149.5.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10149.5.p1.exon3MSTRG.10149.5.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10149.5.p1.exon2MSTRG.10149.5.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10149.5.p1.exon1MSTRG.10149.5.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000069_pilongenomesc0000069_pilon:1530659..1531811 -