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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000069_pilon:1515574..1517907- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10147.4.p2 ID=MSTRG.10147.4.p2|Name=MSTRG.10147.4.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2334bp|location=Sequence derived from alignment at sc0000069_pilon:1515574..1517907- (Clytia hemisphaerica_ch_hm2_pilon)
TTATTCAGAAAGTAAAGACAATTGACTAAGATAGAAAATAAAAATGACAA
AAGGTGGTTATGATGTTGAATTGGTGAATGGTGAACTGGAGAATGATATC
ACGTGTTCAATCTGTTTGTTCATTTTGAAAGATCCTATGCAAGCCATAGA
ATGTGGACATCGATTTTGTAAAACTTGTGTTGCTGGTCTTCAAAAGGGGT
AATGATGACAGCGTAGAATACTAGACTGATATTATTATCGTAATTGCAAA
GACTTAGAAATATTACATCACTAAAAGAGTTGGTGATCGGATTTTGGTAT
TCCCTACGCCATGATGAATCTTATGTATTATTATTGCAAAATATCATTAG
GGAAGATATTTGATTTGGGGTCATTTTGTGTGATCATTTTGTTGTTTTTT
TATTTAGTGTTAATGGTAGTTATGTTTGCCCAGAAGATCGTGCTGAAACG
GCTGTAAGTTCACAAAGACATATTTTTAACTTAACCTTTAATCCTATCTT
ATTACCATGGTGTCTGTGAATTTTTTTTATAAGAATACTTTGGCTGAGGG
TGAGCATTATTCTTATTTTTCTATTACTCAAAACAATACAGTAGGCCTAT
TGTTCTAATTGAACCCTGATATTCTTATTCTTATAAAACAGAATCGTGTA
TGAGAAATCTTGAAAGCAGACCGACCAGTTAATTTACCAATTTTTTCATA
AATTTAAATACTACAAACACTTTTCGCAAACCTTTTTCAGTTTTATCCAG
ATAAAGGAAGAGGTCGTGAAATTTTGGGTTTTGCAGTCAGATGCTCAAAC
AAAATGCTTGGTTGTCCATGGGTGAAAGAATTGCGTGAAGTAGAGGTAGT
AAAAGAATTGCGTGAAGTAGAGGTAGTAAAAGTTACTTTTTTTGGTCTCT
AATTCCTTCCATTGAGCTTTTTTTATCAAAAATATAGTTTTTGCTTTTTG
GAAATTTTTAGGATCACAAAGAACAATGCGACTTCAAAATCGTTAAATGT
GTCGTTGAATCGTGTGCTGAGGAGTTTCAAAGGCGATACGAAGATCAGCA
CTACAAAAAGTGCAAATACAGAATGGTTCAATGCCCATTTTGCAACGAAG
ATTATATTTTTGCTTTTGAGGAGGTATACTCTTGTTGATTTACCTCAGTT
AGGTTGACATGTTTTTGACTACAGTATATCTATTATGTTTATTGAATGAA
TGAATGAATGAATGAATGAATGAATGAATGAATGAATGAATGAATGAATG
AATGAATGAATGAATGAATGAATGAATGAATGGATGAATGAATGAATGAA
TGAATGAATGAATGAATGAATGAATGAATGAAGAATGAATGAACTTTTAG
GAACACATTGACGATTGTGAAGAATTTTTGGAATGTTGTGATTATTGTTC
CGATATTGATATCCCAAGATCGAAGGTAATATAATTATTCTGACAAATTC
ATTGGAATTAAGCTTCACTTGTTACTTTGGGGCTGTGGAAATCTAAAATC
GTGAATTAAATACAAAATAGTAAAAATTAAAACACTTTATCATTATGTTT
AAAGTTTATATCAACTTTAGATGGACATTCACTTGTCAAAAGATTGCAAG
AAGATCCCGCTTTGTTGTCCATATGAGCCTCTTGGCTGCAAAGAAAAGGT
GAGATTAAACTTCAGGCTACTGTTGTAACTCAATGTCTTGCTTTCTGTGG
ACTTCATTCCAACTTTATTATTCAAATTCTGCATTTTTCTTCTAGATGCT
TTTTAGTGATCTTGAAAAACACGAGGTAATATCTACTCAACACCACTTGA
AACTAGCCATAAACAAAATTACGAACCAACAAGAACAAATTCAATTGCTG
ATGGATAACCAAAATCAATTGTTGGAAAGATTGAGTAAAGTGGAAGGCAA
GTCGGATGCGATTCTTCTAATGAAAGATCAGCATATTTGGAGGATACCAC
GATTTTCTGACGAAATACGAAAAGCCAAAAACCTAGGAAGACATCACACA
CTTTCAAAATTCATTTACACGTCAAAAGGTTACAGATTGGAATGTATTTT
ACAACCTTATCAGCGATTATTTCAATCTGGTACCCTGCTTTCTTGCAGAA
CCACTGTAGGAAGTTTTGACGAGTCTTTAACATGGCCTATGAACAAATTC
ATGATCACAAGTTGCATCATTGATCCACAAGGAATAGCGAGAGACAAAAC
CAGTGTTACTACTACAAACAGTCGTGCTTTCAAAAAACCACCACACTTGA
ATCCTGGTGCAACATCATTTTTCATACCAGATGAAAATGTTGAAAAATAC
ACTTTTATTGGCATTCTTACAATCAAGATTCAGA Coding sequence (CDS) from alignment at sc0000069_pilon:1515574..1517907- >MSTRG.10147.4.p2 ID=MSTRG.10147.4.p2|Name=MSTRG.10147.4.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2040bp|location=Sequence derived from alignment at sc0000069_pilon:1515574..1517907- (Clytia hemisphaerica_ch_hm2_pilon)
GATCACAAAGAACAATGCGACTTCAAAATCGTTAAATGTGTCGTTGAATC
GTGTGCTGAGGAGTTTCAAAGGCGATACGAAGATCAGCACTACAAAAAGT
GCAAATACAGAATGGTTCAATGCCCATTTTGCAACGAAGATTATATTTTT
GCTTTTGAGGAGGTATACTCTTGTTGATTTTATCCAGATAAAGGAAGAGG
TCGTGAAATTTTGGGTTTTGCAGTCAGATGCTCAAACAAAATGCTTGGTT
GTCCATGGGTGAAAGAATTGCGTGAAGTAGAGGTAGTAAAAGAATTGCGT
GAAGTAGAGTGTTAATGGTAGTTATGTTTGCCCAGAAGATCGTGCTGAAA
CGGCTATGACAAAAGGTGGTTATGATGTTGAATTGGTGAATGGTGAACTG
GAGAATGATATCACGTGTTCAATCTGTTTGTTCATTTTGAAAGATCCTAT
GCAAGCCATAGAATGTGGACATCGATTTTGTAAAACTTGTGTTGCTGGTC
TTCAAAAGGGGATCACAAAGAACAATGCGACTTCAAAATCGTTAAATGTG
TCGTTGAATCGTGTGCTGAGGAGTTTCAAAGGCGATACGAAGATCAGCAC
TACAAAAAGTGCAAATACAGAATGGTTCAATGCCCATTTTGCAACGAAGA
TTATATTTTTGCTTTTGAGGAGGTATACTCTTGTTGATTTTATCCAGATA
AAGGAAGAGGTCGTGAAATTTTGGGTTTTGCAGTCAGATGCTCAAACAAA
ATGCTTGGTTGTCCATGGGTGAAAGAATTGCGTGAAGTAGAGGTAGTAAA
AGAATTGCGTGAAGTAGAGTGTTAATGGTAGTTATGTTTGCCCAGAAGAT
CGTGCTGAAACGGCTATGACAAAAGGTGGTTATGATGTTGAATTGGTGAA
TGGTGAACTGGAGAATGATATCACGTGTTCAATCTGTTTGTTCATTTTGA
AAGATCCTATGCAAGCCATAGAATGTGGACATCGATTTTGTAAAACTTGT
GTTGCTGGTCTTCAAAAGGGGATCACAAAGAACAATGCGACTTCAAAATC
GTTAAATGTGTCGTTGAATCGTGTGCTGAGGAGTTTCAAAGGCGATACGA
AGATCAGCACTACAAAAAGTGCAAATACAGAATGGTTCAATGCCCATTTT
GCAACGAAGATTATATTTTTGCTTTTGAGGAGGTATACTCTTGTTGATTT
TATCCAGATAAAGGAAGAGGTCGTGAAATTTTGGGTTTTGCAGTCAGATG
CTCAAACAAAATGCTTGGTTGTCCATGGGTGAAAGAATTGCGTGAAGTAG
AGGTAGTAAAAGAATTGCGTGAAGTAGAGTGTTAATGGTAGTTATGTTTG
CCCAGAAGATCGTGCTGAAACGGCTATGACAAAAGGTGGTTATGATGTTG
AATTGGTGAATGGTGAACTGGAGAATGATATCACGTGTTCAATCTGTTTG
TTCATTTTGAAAGATCCTATGCAAGCCATAGAATGTGGACATCGATTTTG
TAAAACTTGTGTTGCTGGTCTTCAAAAGGGGATCACAAAGAACAATGCGA
CTTCAAAATCGTTAAATGTGTCGTTGAATCGTGTGCTGAGGAGTTTCAAA
GGCGATACGAAGATCAGCACTACAAAAAGTGCAAATACAGAATGGTTCAA
TGCCCATTTTGCAACGAAGATTATATTTTTGCTTTTGAGGAGGTATACTC
TTGTTGATTTTATCCAGATAAAGGAAGAGGTCGTGAAATTTTGGGTTTTG
CAGTCAGATGCTCAAACAAAATGCTTGGTTGTCCATGGGTGAAAGAATTG
CGTGAAGTAGAGGTAGTAAAAGAATTGCGTGAAGTAGAGTGTTAATGGTA
GTTATGTTTGCCCAGAAGATCGTGCTGAAACGGCTATGACAAAAGGTGGT
TATGATGTTGAATTGGTGAATGGTGAACTGGAGAATGATATCACGTGTTC
AATCTGTTTGTTCATTTTGAAAGATCCTATGCAAGCCATAGAATGTGGAC
ATCGATTTTGTAAAACTTGTGTTGCTGGTCTTCAAAAGGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000069_pilon | genome | sc0000069_pilon:1515574..1517907 - |
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